RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 TNPO2O14787 897 aaKnown RBP20.54■□□□□ 0.88
CGREF1-201ENST00000260595 USP5P45974 858 aa20.54■□□□□ 0.88
CGREF1-201ENST00000260595 GCLCP48506 637 aaPredicted RBP20.54■□□□□ 0.88
CGREF1-201ENST00000260595 PABPC4Q13310 644 aaKnown RBP eCLIP20.54■□□□□ 0.88
CGREF1-201ENST00000260595 IRF5Q13568 498 aa20.54■□□□□ 0.88
CGREF1-201ENST00000260595 TTF1Q15361 905 aaPredicted RBP20.54■□□□□ 0.88
CGREF1-201ENST00000260595 TATDN1Q6P1N9 297 aa20.54■□□□□ 0.88
CGREF1-201ENST00000260595 TRIM34Q9BYJ4 488 aa20.54■□□□□ 0.88
CGREF1-201ENST00000260595 ZBTB21Q9ULJ3 1066 aa20.54■□□□□ 0.88
CGREF1-201ENST00000260595 C19orf81C9J6K1 198 aa20.53■□□□□ 0.88
CGREF1-201ENST00000260595 ADCY3O60266 1144 aa20.53■□□□□ 0.88
CGREF1-201ENST00000260595 RAB11FIP3O75154 756 aa20.53■□□□□ 0.88
CGREF1-201ENST00000260595 CCL5P13501 91 aa20.53■□□□□ 0.88
CGREF1-201ENST00000260595 HOXA7P31268 230 aaPredicted RBP20.53■□□□□ 0.88
CGREF1-201ENST00000260595 C20orf194Q5TEA3 1177 aa20.53■□□□□ 0.88
CGREF1-201ENST00000260595 EHD4Q9H223 541 aa20.53■□□□□ 0.88
CGREF1-201ENST00000260595 MGAMO43451 1857 aa20.53■□□□□ 0.88
CGREF1-201ENST00000260595 USP17L10C9JJH3 530 aa20.52■□□□□ 0.88
CGREF1-201ENST00000260595 GJB1P08034 283 aa20.52■□□□□ 0.88
CGREF1-201ENST00000260595 IFIT2P09913 472 aaKnown RBP20.52■□□□□ 0.88
CGREF1-201ENST00000260595 PDE6AP16499 860 aa20.52■□□□□ 0.88
CGREF1-201ENST00000260595 GJA8P48165 433 aa20.52■□□□□ 0.88
CGREF1-201ENST00000260595 UBXN2AP68543 259 aa20.52■□□□□ 0.88
CGREF1-201ENST00000260595 PXYLP1Q8TE99 480 aa20.52■□□□□ 0.88
CGREF1-201ENST00000260595 CHMP4BQ9H444 224 aaKnown RBP20.52■□□□□ 0.88
CGREF1-201ENST00000260595 BIN2Q9UBW5 565 aaPredicted RBP20.52■□□□□ 0.88
CGREF1-201ENST00000260595 TCRBV5S4A2TA0A5A2 114 aa20.51■□□□□ 0.87
CGREF1-201ENST00000260595 ELNP15502 786 aa20.51■□□□□ 0.87
CGREF1-201ENST00000260595 SLC9C2Q5TAH2 1124 aa20.51■□□□□ 0.87
CGREF1-201ENST00000260595 NKX2-3Q8TAU0 364 aa20.51■□□□□ 0.87
CGREF1-201ENST00000260595 COA7Q96BR5 231 aa20.51■□□□□ 0.87
CGREF1-201ENST00000260595 P2RX7Q99572 595 aaKnown RBP20.51■□□□□ 0.87
CGREF1-201ENST00000260595 RNF208Q9H0X6 261 aa20.51■□□□□ 0.87
CGREF1-201ENST00000260595 TMOD4Q9NZQ9 345 aa20.51■□□□□ 0.87
CGREF1-201ENST00000260595 MORF4L1Q9UBU8 362 aa20.51■□□□□ 0.87
CGREF1-201ENST00000260595 SERPINB13Q9UIV8 391 aa20.51■□□□□ 0.87
CGREF1-201ENST00000260595 MAGEB6P1A0A0J9YX57 407 aa20.5■□□□□ 0.87
CGREF1-201ENST00000260595 GOLIM4O00461 696 aa20.5■□□□□ 0.87
CGREF1-201ENST00000260595 GH2P01242 217 aa20.5■□□□□ 0.87
CGREF1-201ENST00000260595 PLCD1P51178 756 aa20.5■□□□□ 0.87
CGREF1-201ENST00000260595 PDE3AQ14432 1141 aa20.5■□□□□ 0.87
CGREF1-201ENST00000260595 UBE2Q1Q7Z7E8 422 aa20.5■□□□□ 0.87
CGREF1-201ENST00000260595 TTC6Q86TZ1 520 aa20.5■□□□□ 0.87
CGREF1-201ENST00000260595 EDC3Q96F86 508 aaKnown RBP20.5■□□□□ 0.87
CGREF1-201ENST00000260595 DNAJC2Q99543 621 aaKnown RBP20.5■□□□□ 0.87
CGREF1-201ENST00000260595 UNC93B1Q9H1C4 597 aa20.5■□□□□ 0.87
CGREF1-201ENST00000260595 EMILIN3Q9NT22 766 aa20.5■□□□□ 0.87
CGREF1-201ENST00000260595 GJD2Q9UKL4 321 aa20.49■□□□□ 0.87
CGREF1-201ENST00000260595 ZNF532Q9HCE3 1301 aa20.49■□□□□ 0.87
CGREF1-201ENST00000260595 INHAP05111 366 aa20.48■□□□□ 0.87
CGREF1-201ENST00000260595 ATP5JP18859 108 aa20.48■□□□□ 0.87
CGREF1-201ENST00000260595 SHMT1P34896 483 aa20.48■□□□□ 0.87
CGREF1-201ENST00000260595 IRX3P78415 501 aaPredicted RBP20.48■□□□□ 0.87
CGREF1-201ENST00000260595 GABPAQ06546 454 aa20.48■□□□□ 0.87
CGREF1-201ENST00000260595 POTEEQ6S8J3 1075 aa20.48■□□□□ 0.87
CGREF1-201ENST00000260595 TXNRD2Q9NNW7 524 aa20.48■□□□□ 0.87
CGREF1-201ENST00000260595 PEX10O60683 326 aa20.47■□□□□ 0.87
CGREF1-201ENST00000260595 HERVK_113P62684 666 aa20.47■□□□□ 0.87
CGREF1-201ENST00000260595 EVX2Q03828 476 aa20.47■□□□□ 0.87
CGREF1-201ENST00000260595 CERKLQ49MI3 558 aaPredicted RBP20.47■□□□□ 0.87
CGREF1-201ENST00000260595 USP17L2Q6R6M4 530 aa20.47■□□□□ 0.87
CGREF1-201ENST00000260595 U2AF1L4Q8WU68 220 aaKnown RBP20.47■□□□□ 0.87
CGREF1-201ENST00000260595 GCC1Q96CN9 775 aa20.47■□□□□ 0.87
CGREF1-201ENST00000260595 C12orf42Q96LP6 360 aa20.47■□□□□ 0.87
CGREF1-201ENST00000260595 BCL11AQ9H165 835 aa20.47■□□□□ 0.87
CGREF1-201ENST00000260595 BOLA2Q9H3K6 86 aa20.47■□□□□ 0.87
CGREF1-201ENST00000260595 RBPJLQ9UBG7 517 aa20.47■□□□□ 0.87
CGREF1-201ENST00000260595 SGPL1O95470 568 aa20.46■□□□□ 0.87
CGREF1-201ENST00000260595 SLFNL1Q499Z3 407 aa20.46■□□□□ 0.87
CGREF1-201ENST00000260595 LCORLQ8N3X6 602 aa20.46■□□□□ 0.87
CGREF1-201ENST00000260595 CRNKL1Q9BZJ0 848 aaKnown RBP20.46■□□□□ 0.87
CGREF1-201ENST00000260595 PAG1Q9NWQ8 432 aa20.46■□□□□ 0.87
CGREF1-201ENST00000260595 MYH1P12882 1939 aa20.46■□□□□ 0.87
CGREF1-201ENST00000260595 DDX60LQ5H9U9 1706 aaKnown RBP20.45■□□□□ 0.86
CGREF1-201ENST00000260595 POLR3DP05423 398 aaPredicted RBP20.45■□□□□ 0.86
CGREF1-201ENST00000260595 GUCY1A2P33402 732 aa20.45■□□□□ 0.86
CGREF1-201ENST00000260595 ABCB5Q2M3G0 1257 aa20.45■□□□□ 0.86
CGREF1-201ENST00000260595 Q3C1V9 767 aa20.45■□□□□ 0.86
CGREF1-201ENST00000260595 GPRC5AQ8NFJ5 357 aa20.45■□□□□ 0.86
CGREF1-201ENST00000260595 SDR42E1Q8WUS8 393 aa20.45■□□□□ 0.86
CGREF1-201ENST00000260595 HAUS7Q99871 368 aa20.45■□□□□ 0.86
CGREF1-201ENST00000260595 DCP1AQ9NPI6 582 aaPredicted RBP20.45■□□□□ 0.86
CGREF1-201ENST00000260595 PAK6Q9NQU5 681 aaPredicted RBP20.45■□□□□ 0.86
CGREF1-201ENST00000260595 TAOK2Q9UL54 1235 aa20.45■□□□□ 0.86
CGREF1-201ENST00000260595 ADD2P35612 726 aa20.44■□□□□ 0.86
CGREF1-201ENST00000260595 RAB3GAP1Q15042 981 aa20.44■□□□□ 0.86
CGREF1-201ENST00000260595 HABP4Q5JVS0 413 aaKnown RBP20.44■□□□□ 0.86
CGREF1-201ENST00000260595 ACER1Q8TDN7 264 aa20.44■□□□□ 0.86
CGREF1-201ENST00000260595 KIAA1683Q9H0B3 1180 aa20.44■□□□□ 0.86
CGREF1-201ENST00000260595 MCM9Q9NXL9 1143 aa20.44■□□□□ 0.86
CGREF1-201ENST00000260595 DOCK3Q8IZD9 2030 aa20.43■□□□□ 0.86
CGREF1-201ENST00000260595 CHGBP05060 677 aa20.43■□□□□ 0.86
CGREF1-201ENST00000260595 ZYXQ15942 572 aaKnown RBP20.43■□□□□ 0.86
CGREF1-201ENST00000260595 LRRCC1Q9C099 1032 aa20.43■□□□□ 0.86
CGREF1-201ENST00000260595 ARMT1Q9H993 441 aa20.43■□□□□ 0.86
CGREF1-201ENST00000260595 PRKAB2O43741 272 aa20.42■□□□□ 0.86
CGREF1-201ENST00000260595 SMARCA5O60264 1052 aaPredicted RBP20.42■□□□□ 0.86
CGREF1-201ENST00000260595 CYP2D6P10635 497 aa20.42■□□□□ 0.86
CGREF1-201ENST00000260595 GTF3C2Q8WUA4 911 aaPredicted RBP20.42■□□□□ 0.86
CGREF1-201ENST00000260595 DEFB118Q96PH6 123 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms