RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 LONRF2Q1L5Z9 754 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 TM6SF1Q9BZW5 370 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 ODF2LQ9ULJ1 636 aa10.87□□□□□ -0.67
CTDSPL2-201ENST00000260327 CUTAO60888 179 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 PPFIA4O75335 1185 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 ZMYND10O75800 440 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 RNF168Q8IYW5 571 aaPredicted RBP10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 ADAMTS2O95450 1211 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 SETSIPP0DME0 302 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 SLC8A1P32418 973 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 CTNNA1P35221 906 aaKnown RBP10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 PSMD6Q15008 389 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 KRT40Q6A162 431 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 GBP7Q8N8V2 638 aaPredicted RBP10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 KBTBD3Q8NAB2 608 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 RTL9Q8NET4 1388 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 TRIM4Q9C037 500 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 MTUS1Q9ULD2 1270 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 hCG_1642624A0A1W2PR95 340 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 E7EWF7 191 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 CFAP157Q5JU67 520 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 CACTINQ8WUQ7 758 aaKnown RBP10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 ZSWIM6Q9HCJ5 1215 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 CALML3P27482 149 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 PTPROQ16827 1216 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 PIK3AP1Q6ZUJ8 805 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 VPS52Q8N1B4 723 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 RPGRQ92834 1020 aaKnown RBP10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 ARMT1Q9H993 441 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 SLC24A3Q9HC58 644 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 RGS12O14924 1447 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 MYO1CO00159 1063 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 RBBP5Q15291 538 aaKnown RBP10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 STAG1Q8WVM7 1258 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 SYNCQ9H7C4 482 aa10.86□□□□□ -0.67
CTDSPL2-201ENST00000260327 IRS4O14654 1257 aaPredicted RBP10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 RNF40O75150 1001 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 PPM1FP49593 454 aaPredicted RBP10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 MLKLQ8NB16 471 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 METTL22Q9BUU2 404 aaPredicted RBP10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 LDHCP07864 332 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 ARL1P40616 181 aaPredicted RBP10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 MAGEA1P43355 309 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 PAK1Q13153 545 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 CSGALNACT2Q8N6G5 542 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 BICD1Q96G01 975 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 XAGE2Q96GT9 111 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 MCM9Q9NXL9 1143 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 ZNF219Q9P2Y4 722 aaPredicted RBP10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 V9GY48 417 aaPredicted RBP10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 ACTN4O43707 911 aaKnown RBP10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 HIP1RO75146 1068 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 PFKFB1P16118 471 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 HSPA1LP34931 641 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 CFAP221Q4G0U5 840 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 AKNAD1Q5T1N1 836 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 TAOK1Q7L7X3 1001 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 MED4Q9NPJ6 270 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 EYA2O00167 538 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 CTDSPL2Q05D32 466 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 PLS1Q14651 629 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 ADALQ6DHV7 355 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 TMOD2Q9NZR1 351 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 ABCC2Q92887 1545 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 TRAF5O00463 557 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 CALM1P0DP23 149 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 CALM2P0DP24 149 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 CALM3P0DP25 149 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 GNAT2P19087 354 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 PDE4DQ08499 809 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 TYW1BQ6NUM6 668 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 BLZF1Q9H2G9 400 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 TNRQ92752 1358 aa10.85□□□□□ -0.67
CTDSPL2-201ENST00000260327 TNNI2P48788 182 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 LETM2Q2VYF4 491 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 KRT79Q5XKE5 535 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 PPP4R3AQ6IN85 833 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 WWC3Q9ULE0 1092 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 CASQ2O14958 399 aaPredicted RBP10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 DEXIO95424 95 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 GNAQP50148 359 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 NCBP1Q09161 790 aaKnown RBP10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 CCDC62Q6P9F0 684 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 SIRT2Q8IXJ6 389 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 F8W031 263 aaPredicted RBP10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 OPHN1O60890 802 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 ZNF790Q6PG37 636 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 ZNF365Q70YC5 407 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 SSH3Q8TE77 659 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 SERTAD1Q9UHV2 236 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 KIF24Q5T7B8 1368 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 PRDM1O75626 825 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 NDUFA8P51970 172 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 ICE2Q659A1 982 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 SLF2Q8IX21 1173 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 UHMK1Q8TAS1 419 aaKnown RBP10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 EAF2Q96CJ1 260 aaPredicted RBP10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 MRFAP1L1Q96HT8 127 aa10.84□□□□□ -0.67
CTDSPL2-201ENST00000260327 C6orf50Q9HD87 102 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms