RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 PDE6BP35913 854 aa12.19□□□□□ -0.46
GCM1-201ENST00000259803 MATR3P43243 847 aaKnown RBP eCLIP12.19□□□□□ -0.46
GCM1-201ENST00000259803 CPLX2Q6PUV4 134 aaKnown RBP12.19□□□□□ -0.46
GCM1-201ENST00000259803 MARCH10Q8NA82 808 aaPredicted RBP12.19□□□□□ -0.46
GCM1-201ENST00000259803 OSBPL10Q9BXB5 764 aa12.19□□□□□ -0.46
GCM1-201ENST00000259803 STK31Q9BXU1 1019 aa12.19□□□□□ -0.46
GCM1-201ENST00000259803 TRIM4Q9C037 500 aa12.19□□□□□ -0.46
GCM1-201ENST00000259803 SLC45A1Q9Y2W3 748 aa12.19□□□□□ -0.46
GCM1-201ENST00000259803 GLI3P10071 1580 aa12.19□□□□□ -0.46
GCM1-201ENST00000259803 HOXA2O43364 376 aa12.19□□□□□ -0.46
GCM1-201ENST00000259803 ARHGEF6Q15052 776 aa12.19□□□□□ -0.46
GCM1-201ENST00000259803 CCDC152Q4G0S7 254 aa12.19□□□□□ -0.46
GCM1-201ENST00000259803 SMUG1Q53HV7 270 aa12.19□□□□□ -0.46
GCM1-201ENST00000259803 CDCA2Q69YH5 1023 aaPredicted RBP12.19□□□□□ -0.46
GCM1-201ENST00000259803 IL17REQ8NFR9 667 aa12.19□□□□□ -0.46
GCM1-201ENST00000259803 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.19□□□□□ -0.46
GCM1-201ENST00000259803 TAOK3Q9H2K8 898 aa12.19□□□□□ -0.46
GCM1-201ENST00000259803 ST7Q9NRC1 585 aa12.19□□□□□ -0.46
GCM1-201ENST00000259803 SPO11Q9Y5K1 396 aa12.19□□□□□ -0.46
GCM1-201ENST00000259803 KCNQ2O43526 872 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 GPTP24298 496 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 IGBP1P78318 339 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 FAM160A1Q05DH4 1040 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 CCBE1Q6UXH8 406 aaPredicted RBP12.18□□□□□ -0.46
GCM1-201ENST00000259803 RELL1Q8IUW5 271 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 MFN1Q8IWA4 741 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 SLC7A5P1Q8MH63 180 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 LNPKQ9C0E8 428 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 GOLGA6L10A6NI86 522 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 PDLIM1O00151 329 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 ACTN2P35609 894 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 PABPC4Q13310 644 aaKnown RBP eCLIP12.18□□□□□ -0.46
GCM1-201ENST00000259803 SEPT2Q15019 361 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 Q4G0T1 1027 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 CDHR1Q96JP9 859 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 CORO1BQ9BR76 489 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 SFMBT1Q9UHJ3 866 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 MYO6Q9UM54 1294 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 HNRNPH1P31943 449 aaKnown RBP12.18□□□□□ -0.46
GCM1-201ENST00000259803 PIK3CAP42336 1068 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 DDR1Q08345 913 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 NFE2L2Q16236 605 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 LRRC23Q53EV4 343 aaPredicted RBP12.18□□□□□ -0.46
GCM1-201ENST00000259803 SPDYE1Q8NFV5 336 aaPredicted RBP12.18□□□□□ -0.46
GCM1-201ENST00000259803 ATRIPQ8WXE1 791 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 TSR2Q969E8 191 aaKnown RBP12.18□□□□□ -0.46
GCM1-201ENST00000259803 EPAS1Q99814 870 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 SLC30A1Q9Y6M5 507 aa12.18□□□□□ -0.46
GCM1-201ENST00000259803 VIRMAQ69YN4 1812 aaKnown RBP12.18□□□□□ -0.46
GCM1-201ENST00000259803 ATRNO75882 1429 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 DYTNA2CJ06 578 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 TBKBP1A7MCY6 615 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 PHKG2P15735 406 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 WTAPQ15007 396 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 CNGA3Q16281 694 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 KRT24Q2M2I5 525 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 ZNF772Q68DY9 489 aaPredicted RBP12.17□□□□□ -0.46
GCM1-201ENST00000259803 RNF168Q8IYW5 571 aaPredicted RBP12.17□□□□□ -0.46
GCM1-201ENST00000259803 CEP57L1Q8IYX8 460 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 FRS2Q8WU20 508 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 HPS3Q969F9 1004 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 ERP27Q96DN0 273 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 ZNF304Q9HCX3 659 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 PRR12Q9ULL5 1215 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 SLC26A4O43511 780 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 RXRBP28702 533 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 INPP5BP32019 993 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 SCRN1Q12765 414 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 BIRC3Q13489 604 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 HOOK3Q86VS8 718 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 SH3TC2Q8TF17 1288 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 SPIRE2Q8WWL2 714 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 JPH2Q9BR39 696 aaPredicted RBP12.17□□□□□ -0.46
GCM1-201ENST00000259803 DNAAF2Q9NVR5 837 aaKnown RBP12.17□□□□□ -0.46
GCM1-201ENST00000259803 CHMP3Q9Y3E7 222 aa12.17□□□□□ -0.46
GCM1-201ENST00000259803 OVOS2A0A0G2JMS6 1433 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 SGTAO43765 313 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 RPS6KA5O75582 802 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 G3BP1Q13283 466 aaKnown RBP eCLIP12.16□□□□□ -0.46
GCM1-201ENST00000259803 KMT5BQ4FZB7 885 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 PLEKHO1Q53GL0 409 aaPredicted RBP12.16□□□□□ -0.46
GCM1-201ENST00000259803 DCLK2Q8N568 766 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 NCAPD2Q15021 1401 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 PTPRCP08575 1304 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 KCNQ3O43525 872 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 MAN1A1P33908 653 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 CLCN2P51788 898 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 NEK2P51955 445 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 KCNQ4P56696 695 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 SLC39A6Q13433 755 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 SEPT7Q16181 437 aaKnown RBP12.16□□□□□ -0.46
GCM1-201ENST00000259803 DPH6Q7L8W6 267 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 TMC6Q7Z403 805 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 DDX11Q96FC9 970 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 TUBA8Q9NY65 449 aaPredicted RBP12.16□□□□□ -0.46
GCM1-201ENST00000259803 DISP2A7MBM2 1401 aa12.16□□□□□ -0.46
GCM1-201ENST00000259803 LINC00854A0A1B0GVQ3 168 aa12.15□□□□□ -0.46
GCM1-201ENST00000259803 SPDYE3A6NKU9 549 aa12.15□□□□□ -0.46
GCM1-201ENST00000259803 ELL2O00472 640 aaPredicted RBP12.15□□□□□ -0.46
GCM1-201ENST00000259803 CHL1O00533 1208 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms