RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 WIPI1Q5MNZ9 446 aaPredicted RBP8.56□□□□□ -1.04
TRA2B-201ENST00000259043 FAM214BQ7L5A3 538 aa8.56□□□□□ -1.04
TRA2B-201ENST00000259043 BCL2L13Q9BXK5 485 aa8.56□□□□□ -1.04
TRA2B-201ENST00000259043 SSU72Q9NP77 194 aaKnown RBP8.56□□□□□ -1.04
TRA2B-201ENST00000259043 FAM53CQ9NYF3 392 aa8.56□□□□□ -1.04
TRA2B-201ENST00000259043 ZBTB7CA1YPR0 619 aa8.55□□□□□ -1.04
TRA2B-201ENST00000259043 LRRC10BA6NIK2 292 aa8.55□□□□□ -1.04
TRA2B-201ENST00000259043 RLBP1P12271 317 aa8.55□□□□□ -1.04
TRA2B-201ENST00000259043 TMCO4Q5TGY1 634 aa8.55□□□□□ -1.04
TRA2B-201ENST00000259043 HDXQ7Z353 690 aa8.55□□□□□ -1.04
TRA2B-201ENST00000259043 GIPC2Q8TF65 315 aa8.55□□□□□ -1.04
TRA2B-201ENST00000259043 WNT10AQ9GZT5 417 aa8.55□□□□□ -1.04
TRA2B-201ENST00000259043 FBRSQ9HAH7 460 aa8.55□□□□□ -1.04
TRA2B-201ENST00000259043 VTI1BQ9UEU0 232 aa8.55□□□□□ -1.04
TRA2B-201ENST00000259043 PRAMEF27A3QJZ7 478 aa8.54□□□□□ -1.04
TRA2B-201ENST00000259043 MRPL58Q14197 206 aaKnown RBP8.54□□□□□ -1.04
TRA2B-201ENST00000259043 SLBPQ14493 270 aaKnown RBP eCLIP8.54□□□□□ -1.04
TRA2B-201ENST00000259043 ZSWIM9Q86XI8 627 aa8.54□□□□□ -1.04
TRA2B-201ENST00000259043 TOP6BLQ8N6T0 577 aa8.54□□□□□ -1.04
TRA2B-201ENST00000259043 TNKS2Q9H2K2 1166 aa8.54□□□□□ -1.04
TRA2B-201ENST00000259043 MRS2Q9HD23 443 aa8.54□□□□□ -1.04
TRA2B-201ENST00000259043 SNX11Q9Y5W9 270 aa8.54□□□□□ -1.04
TRA2B-201ENST00000259043 CAP2P40123 477 aa8.53□□□□□ -1.04
TRA2B-201ENST00000259043 KCT2Q8NC54 265 aa8.53□□□□□ -1.04
TRA2B-201ENST00000259043 ZNF507Q8TCN5 953 aa8.53□□□□□ -1.04
TRA2B-201ENST00000259043 RHOVQ96L33 236 aa8.53□□□□□ -1.04
TRA2B-201ENST00000259043 HEXIM2Q96MH2 286 aaKnown RBP8.53□□□□□ -1.04
TRA2B-201ENST00000259043 MIR1-1HGQ9H1L0 117 aa8.53□□□□□ -1.04
TRA2B-201ENST00000259043 PRDM10Q9NQV6 1147 aa8.53□□□□□ -1.04
TRA2B-201ENST00000259043 PICK1Q9NRD5 415 aa8.53□□□□□ -1.04
TRA2B-201ENST00000259043 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.53□□□□□ -1.04
TRA2B-201ENST00000259043 ITIH2P19823 946 aa8.52□□□□□ -1.05
TRA2B-201ENST00000259043 KCNMB1Q16558 191 aa8.52□□□□□ -1.05
TRA2B-201ENST00000259043 NKG7Q16617 165 aa8.52□□□□□ -1.05
TRA2B-201ENST00000259043 ARMCX6Q7L4S7 300 aa8.52□□□□□ -1.05
TRA2B-201ENST00000259043 RSRP1Q9BUV0 290 aa8.52□□□□□ -1.05
TRA2B-201ENST00000259043 TACC3Q9Y6A5 838 aa8.52□□□□□ -1.05
TRA2B-201ENST00000259043 F6X3S4 739 aa8.51□□□□□ -1.05
TRA2B-201ENST00000259043 EOMESO95936 686 aa8.51□□□□□ -1.05
TRA2B-201ENST00000259043 LMNB1P20700 586 aa8.51□□□□□ -1.05
TRA2B-201ENST00000259043 CDC37L1Q7L3B6 337 aa8.51□□□□□ -1.05
TRA2B-201ENST00000259043 ASB11Q8WXH4 323 aa8.51□□□□□ -1.05
TRA2B-201ENST00000259043 TOX2Q96NM4 488 aa8.51□□□□□ -1.05
TRA2B-201ENST00000259043 KRTAP4-11Q9BYQ6 195 aa8.51□□□□□ -1.05
TRA2B-201ENST00000259043 RB1CC1Q8TDY2 1594 aa8.51□□□□□ -1.05
TRA2B-201ENST00000259043 ZNF503-AS2A6NEH8 195 aa8.5□□□□□ -1.05
TRA2B-201ENST00000259043 LRIG2O94898 1065 aa8.5□□□□□ -1.05
TRA2B-201ENST00000259043 RAP1GAPP47736 663 aa8.5□□□□□ -1.05
TRA2B-201ENST00000259043 RPL6Q02878 288 aaKnown RBP8.5□□□□□ -1.05
TRA2B-201ENST00000259043 LMNB2Q03252 620 aa8.5□□□□□ -1.05
TRA2B-201ENST00000259043 MLANAQ16655 118 aa8.5□□□□□ -1.05
TRA2B-201ENST00000259043 TSNAXIP1Q2TAA8 658 aa8.5□□□□□ -1.05
TRA2B-201ENST00000259043 ZNF326Q5BKZ1 582 aaKnown RBP8.5□□□□□ -1.05
TRA2B-201ENST00000259043 LDLRAD1Q5T700 205 aa8.5□□□□□ -1.05
TRA2B-201ENST00000259043 CCDC84Q86UT8 332 aaPredicted RBP8.5□□□□□ -1.05
TRA2B-201ENST00000259043 CILP2Q8IUL8 1156 aa8.5□□□□□ -1.05
TRA2B-201ENST00000259043 PRDM7Q9NQW5 492 aa8.5□□□□□ -1.05
TRA2B-201ENST00000259043 FAM221AA4D161 298 aa8.49□□□□□ -1.05
TRA2B-201ENST00000259043 PF4P02776 101 aa8.49□□□□□ -1.05
TRA2B-201ENST00000259043 ZNF16P17020 682 aaPredicted RBP8.49□□□□□ -1.05
TRA2B-201ENST00000259043 GRK4P32298 578 aa8.49□□□□□ -1.05
TRA2B-201ENST00000259043 MFAP1P55081 439 aaKnown RBP8.49□□□□□ -1.05
TRA2B-201ENST00000259043 CAMK2GQ13555 558 aaPredicted RBP8.49□□□□□ -1.05
TRA2B-201ENST00000259043 BNC2Q6ZN30 1099 aaPredicted RBP8.49□□□□□ -1.05
TRA2B-201ENST00000259043 ERMP1Q7Z2K6 904 aa8.49□□□□□ -1.05
TRA2B-201ENST00000259043 TMEM74Q96NL1 305 aa8.49□□□□□ -1.05
TRA2B-201ENST00000259043 KRTAP9-7A8MTY7 169 aa8.48□□□□□ -1.05
TRA2B-201ENST00000259043 IGF2BP3O00425 579 aaKnown RBP eCLIP8.48□□□□□ -1.05
TRA2B-201ENST00000259043 CILPO75339 1184 aa8.48□□□□□ -1.05
TRA2B-201ENST00000259043 SLITRK5O94991 958 aa8.48□□□□□ -1.05
TRA2B-201ENST00000259043 GARTP22102 1010 aa8.48□□□□□ -1.05
TRA2B-201ENST00000259043 ITGAEP38570 1179 aa8.48□□□□□ -1.05
TRA2B-201ENST00000259043 ETF1P62495 437 aaKnown RBP8.48□□□□□ -1.05
TRA2B-201ENST00000259043 ZP2Q05996 745 aa8.48□□□□□ -1.05
TRA2B-201ENST00000259043 IKZF1Q13422 519 aa8.48□□□□□ -1.05
TRA2B-201ENST00000259043 HID1Q8IV36 788 aa8.48□□□□□ -1.05
TRA2B-201ENST00000259043 JARID2Q92833 1246 aaPredicted RBP8.48□□□□□ -1.05
TRA2B-201ENST00000259043 PPP1R16BQ96T49 567 aa8.48□□□□□ -1.05
TRA2B-201ENST00000259043 FOXQ1Q9C009 403 aa8.48□□□□□ -1.05
TRA2B-201ENST00000259043 GTF2IRD1Q9UHL9 959 aa8.48□□□□□ -1.05
TRA2B-201ENST00000259043 TSPAN15O95858 294 aa8.47□□□□□ -1.05
TRA2B-201ENST00000259043 F13A1P00488 732 aa8.47□□□□□ -1.05
TRA2B-201ENST00000259043 CFPP27918 469 aa8.47□□□□□ -1.05
TRA2B-201ENST00000259043 TJP2Q9UDY2 1190 aa8.47□□□□□ -1.05
TRA2B-201ENST00000259043 CTNND2Q9UQB3 1225 aa8.47□□□□□ -1.05
TRA2B-201ENST00000259043 CNTNAP4Q9C0A0 1308 aa8.47□□□□□ -1.05
TRA2B-201ENST00000259043 CST3P01034 146 aaPredicted RBP8.46□□□□□ -1.06
TRA2B-201ENST00000259043 RELL1Q8IUW5 271 aa8.46□□□□□ -1.06
TRA2B-201ENST00000259043 MFSD2AQ8NA29 543 aa8.46□□□□□ -1.06
TRA2B-201ENST00000259043 ZSCAN18Q8TBC5 510 aaPredicted RBP8.46□□□□□ -1.06
TRA2B-201ENST00000259043 GATAD2BQ8WXI9 593 aa8.46□□□□□ -1.06
TRA2B-201ENST00000259043 COPRSQ9NQ92 184 aa8.46□□□□□ -1.06
TRA2B-201ENST00000259043 GBP2P32456 591 aaPredicted RBP8.45□□□□□ -1.06
TRA2B-201ENST00000259043 AFMP43652 599 aa8.45□□□□□ -1.06
TRA2B-201ENST00000259043 PWP1Q13610 501 aa8.45□□□□□ -1.06
TRA2B-201ENST00000259043 PRAMEF13Q5VWM6 474 aa8.45□□□□□ -1.06
TRA2B-201ENST00000259043 SPACA3Q8IXA5 215 aa8.45□□□□□ -1.06
TRA2B-201ENST00000259043 MRPL41Q8IXM3 137 aaKnown RBP8.45□□□□□ -1.06
TRA2B-201ENST00000259043 RIN3Q8TB24 985 aa8.45□□□□□ -1.06
TRA2B-201ENST00000259043 LIN37Q96GY3 246 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms