RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 WDR18Q9BV38 432 aa23.12■■□□□ 1.29
TM6SF1-201ENST00000258909 ASCC2Q9H1I8 757 aaPredicted RBP23.12■■□□□ 1.29
TM6SF1-201ENST00000258909 ZBTB21Q9ULJ3 1066 aa23.12■■□□□ 1.29
TM6SF1-201ENST00000258909 BACE1P56817 501 aa23.11■■□□□ 1.29
TM6SF1-201ENST00000258909 GOLIM4O00461 696 aa23.11■■□□□ 1.29
TM6SF1-201ENST00000258909 CCL5P13501 91 aa23.11■■□□□ 1.29
TM6SF1-201ENST00000258909 ELNP15502 786 aa23.11■■□□□ 1.29
TM6SF1-201ENST00000258909 PABPC4Q13310 644 aaKnown RBP eCLIP23.11■■□□□ 1.29
TM6SF1-201ENST00000258909 EDC3Q96F86 508 aaKnown RBP23.11■■□□□ 1.29
TM6SF1-201ENST00000258909 TAOK2Q9UL54 1235 aa23.11■■□□□ 1.29
TM6SF1-201ENST00000258909 ADCY3O60266 1144 aa23.1■■□□□ 1.29
TM6SF1-201ENST00000258909 TTF1Q15361 905 aaPredicted RBP23.1■■□□□ 1.29
TM6SF1-201ENST00000258909 FAM110CQ1W6H9 321 aa23.1■■□□□ 1.29
TM6SF1-201ENST00000258909 SLC9C2Q5TAH2 1124 aa23.1■■□□□ 1.29
TM6SF1-201ENST00000258909 SHISA4Q96DD7 197 aa23.1■■□□□ 1.29
TM6SF1-201ENST00000258909 RIOK1Q9BRS2 568 aaKnown RBP23.1■■□□□ 1.29
TM6SF1-201ENST00000258909 TMOD4Q9NZQ9 345 aa23.1■■□□□ 1.29
TM6SF1-201ENST00000258909 RAB11FIP3O75154 756 aa23.09■■□□□ 1.29
TM6SF1-201ENST00000258909 GH2P01242 217 aa23.09■■□□□ 1.29
TM6SF1-201ENST00000258909 PDE6AP16499 860 aa23.09■■□□□ 1.29
TM6SF1-201ENST00000258909 CERS3Q8IU89 383 aa23.09■■□□□ 1.29
TM6SF1-201ENST00000258909 SLAIN1Q8ND83 568 aa23.09■■□□□ 1.29
TM6SF1-201ENST00000258909 RNF208Q9H0X6 261 aa23.09■■□□□ 1.29
TM6SF1-201ENST00000258909 CEP290O15078 2479 aa23.08■■□□□ 1.29
TM6SF1-201ENST00000258909 MAGEB6P1A0A0J9YX57 407 aa23.08■■□□□ 1.29
TM6SF1-201ENST00000258909 USP17L10C9JJH3 530 aa23.08■■□□□ 1.29
TM6SF1-201ENST00000258909 PEX10O60683 326 aa23.08■■□□□ 1.29
TM6SF1-201ENST00000258909 GCLCP48506 637 aaPredicted RBP23.08■■□□□ 1.29
TM6SF1-201ENST00000258909 UBXN2AP68543 259 aa23.08■■□□□ 1.29
TM6SF1-201ENST00000258909 SERPINB13Q9UIV8 391 aa23.08■■□□□ 1.29
TM6SF1-201ENST00000258909 ZNF532Q9HCE3 1301 aa23.07■■□□□ 1.28
TM6SF1-201ENST00000258909 PLCD1P51178 756 aa23.07■■□□□ 1.28
TM6SF1-201ENST00000258909 IRX3P78415 501 aaPredicted RBP23.07■■□□□ 1.28
TM6SF1-201ENST00000258909 TATDN1Q6P1N9 297 aa23.07■■□□□ 1.28
TM6SF1-201ENST00000258909 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.07■■□□□ 1.28
TM6SF1-201ENST00000258909 COA7Q96BR5 231 aa23.07■■□□□ 1.28
TM6SF1-201ENST00000258909 P2RX7Q99572 595 aaKnown RBP23.07■■□□□ 1.28
TM6SF1-201ENST00000258909 UNC93B1Q9H1C4 597 aa23.07■■□□□ 1.28
TM6SF1-201ENST00000258909 BOLA2Q9H3K6 86 aa23.07■■□□□ 1.28
TM6SF1-201ENST00000258909 CHMP4BQ9H444 224 aaKnown RBP23.07■■□□□ 1.28
TM6SF1-201ENST00000258909 C19orf81C9J6K1 198 aa23.06■■□□□ 1.28
TM6SF1-201ENST00000258909 EVX2Q03828 476 aa23.06■■□□□ 1.28
TM6SF1-201ENST00000258909 SLFNL1Q499Z3 407 aa23.06■■□□□ 1.28
TM6SF1-201ENST00000258909 TTC6Q86TZ1 520 aa23.06■■□□□ 1.28
TM6SF1-201ENST00000258909 GINM1Q9NU53 330 aa23.06■■□□□ 1.28
TM6SF1-201ENST00000258909 GJB1P08034 283 aa23.05■■□□□ 1.28
TM6SF1-201ENST00000258909 ZYXQ15942 572 aaKnown RBP23.05■■□□□ 1.28
TM6SF1-201ENST00000258909 TMED8Q6PL24 325 aaPredicted RBP23.05■■□□□ 1.28
TM6SF1-201ENST00000258909 EHD4Q9H223 541 aa23.05■■□□□ 1.28
TM6SF1-201ENST00000258909 EMILIN3Q9NT22 766 aa23.05■■□□□ 1.28
TM6SF1-201ENST00000258909 NAV1Q8NEY1 1877 aa23.05■■□□□ 1.28
TM6SF1-201ENST00000258909 TCRBV5S4A2TA0A5A2 114 aa23.05■■□□□ 1.28
TM6SF1-201ENST00000258909 INHAP05111 366 aa23.05■■□□□ 1.28
TM6SF1-201ENST00000258909 POLR3DP05423 398 aaPredicted RBP23.05■■□□□ 1.28
TM6SF1-201ENST00000258909 HOXA7P31268 230 aaPredicted RBP23.05■■□□□ 1.28
TM6SF1-201ENST00000258909 GJA8P48165 433 aa23.05■■□□□ 1.28
TM6SF1-201ENST00000258909 IRF5Q13568 498 aa23.05■■□□□ 1.28
TM6SF1-201ENST00000258909 PDE3AQ14432 1141 aa23.05■■□□□ 1.28
TM6SF1-201ENST00000258909 RAB3GAP1Q15042 981 aa23.05■■□□□ 1.28
TM6SF1-201ENST00000258909 LCORLQ8N3X6 602 aa23.05■■□□□ 1.28
TM6SF1-201ENST00000258909 SMARCA5O60264 1052 aaPredicted RBP23.04■■□□□ 1.28
TM6SF1-201ENST00000258909 CERKLQ49MI3 558 aaPredicted RBP23.04■■□□□ 1.28
TM6SF1-201ENST00000258909 PXYLP1Q8TE99 480 aa23.04■■□□□ 1.28
TM6SF1-201ENST00000258909 SDR42E1Q8WUS8 393 aa23.04■■□□□ 1.28
TM6SF1-201ENST00000258909 CRNKL1Q9BZJ0 848 aaKnown RBP23.04■■□□□ 1.28
TM6SF1-201ENST00000258909 PAG1Q9NWQ8 432 aa23.04■■□□□ 1.28
TM6SF1-201ENST00000258909 DDX60LQ5H9U9 1706 aaKnown RBP23.03■■□□□ 1.28
TM6SF1-201ENST00000258909 SHMT1P34896 483 aa23.03■■□□□ 1.28
TM6SF1-201ENST00000258909 HERVK_113P62684 666 aa23.03■■□□□ 1.28
TM6SF1-201ENST00000258909 ABCB5Q2M3G0 1257 aa23.03■■□□□ 1.28
TM6SF1-201ENST00000258909 NKX2-3Q8TAU0 364 aa23.03■■□□□ 1.28
TM6SF1-201ENST00000258909 FEZ1Q99689 392 aa23.03■■□□□ 1.28
TM6SF1-201ENST00000258909 ARMT1Q9H993 441 aa23.03■■□□□ 1.28
TM6SF1-201ENST00000258909 TXNRD2Q9NNW7 524 aa23.03■■□□□ 1.28
TM6SF1-201ENST00000258909 MCM9Q9NXL9 1143 aa23.03■■□□□ 1.28
TM6SF1-201ENST00000258909 MORF4L1Q9UBU8 362 aa23.03■■□□□ 1.28
TM6SF1-201ENST00000258909 CHGBP05060 677 aa23.02■■□□□ 1.28
TM6SF1-201ENST00000258909 ATP5JP18859 108 aa23.02■■□□□ 1.28
TM6SF1-201ENST00000258909 USP17L2Q6R6M4 530 aa23.02■■□□□ 1.28
TM6SF1-201ENST00000258909 U2AF1L4Q8WU68 220 aaKnown RBP23.02■■□□□ 1.28
TM6SF1-201ENST00000258909 CYP2D6P10635 497 aa23.01■■□□□ 1.27
TM6SF1-201ENST00000258909 ACER1Q8TDN7 264 aa23.01■■□□□ 1.27
TM6SF1-201ENST00000258909 LRRCC1Q9C099 1032 aa23.01■■□□□ 1.27
TM6SF1-201ENST00000258909 GJD2Q9UKL4 321 aa23.01■■□□□ 1.27
TM6SF1-201ENST00000258909 PRKAB2O43741 272 aa23■■□□□ 1.27
TM6SF1-201ENST00000258909 GPRC5AQ8NFJ5 357 aa23■■□□□ 1.27
TM6SF1-201ENST00000258909 HAUS7Q99871 368 aa23■■□□□ 1.27
TM6SF1-201ENST00000258909 PAGR1Q9BTK6 254 aa23■■□□□ 1.27
TM6SF1-201ENST00000258909 DCP1AQ9NPI6 582 aaPredicted RBP23■■□□□ 1.27
TM6SF1-201ENST00000258909 RBPJLQ9UBG7 517 aa23■■□□□ 1.27
TM6SF1-201ENST00000258909 PLXNB2O15031 1838 aa23■■□□□ 1.27
TM6SF1-201ENST00000258909 ADD2P35612 726 aa22.99■■□□□ 1.27
TM6SF1-201ENST00000258909 Q3C1V9 767 aa22.99■■□□□ 1.27
TM6SF1-201ENST00000258909 POTEEQ6S8J3 1075 aa22.99■■□□□ 1.27
TM6SF1-201ENST00000258909 DEFB118Q96PH6 123 aa22.99■■□□□ 1.27
TM6SF1-201ENST00000258909 CABP5Q9NP86 173 aa22.99■■□□□ 1.27
TM6SF1-201ENST00000258909 MBD4O95243 580 aa22.98■■□□□ 1.27
TM6SF1-201ENST00000258909 SGPL1O95470 568 aa22.98■■□□□ 1.27
TM6SF1-201ENST00000258909 GUCY1A2P33402 732 aa22.98■■□□□ 1.27
TM6SF1-201ENST00000258909 GABPAQ06546 454 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms