RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 AASDHPPTQ9NRN7 309 aa6.5□□□□□ -1.37
TCN1-201ENST00000257264 PKD2L1Q9P0L9 805 aa6.5□□□□□ -1.37
TCN1-201ENST00000257264 VPS8Q8N3P4 1428 aa6.5□□□□□ -1.37
TCN1-201ENST00000257264 TRAV20A0A0B4J274 112 aa6.49□□□□□ -1.37
TCN1-201ENST00000257264 ACRP10323 421 aa6.49□□□□□ -1.37
TCN1-201ENST00000257264 NME1P15531 152 aaKnown RBP6.49□□□□□ -1.37
TCN1-201ENST00000257264 SDSP20132 328 aa6.49□□□□□ -1.37
TCN1-201ENST00000257264 ZNF423Q2M1K9 1284 aa6.49□□□□□ -1.37
TCN1-201ENST00000257264 TCEAL8Q8IYN2 117 aa6.49□□□□□ -1.37
TCN1-201ENST00000257264 CHMP4CQ96CF2 233 aa6.49□□□□□ -1.37
TCN1-201ENST00000257264 ATG4CQ96DT6 458 aa6.49□□□□□ -1.37
TCN1-201ENST00000257264 CAMKK2Q96RR4 588 aa6.49□□□□□ -1.37
TCN1-201ENST00000257264 POP1Q99575 1024 aaKnown RBP6.49□□□□□ -1.37
TCN1-201ENST00000257264 CHST12Q9NRB3 414 aa6.49□□□□□ -1.37
TCN1-201ENST00000257264 DYRK1BQ9Y463 629 aa6.49□□□□□ -1.37
TCN1-201ENST00000257264 PCDHGC4Q9Y5F7 938 aa6.49□□□□□ -1.37
TCN1-201ENST00000257264 NPTXRO95502 500 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 SPEM2Q0P670 501 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 HSP90AA2PQ14568 343 aaPredicted RBP6.48□□□□□ -1.37
TCN1-201ENST00000257264 LBRQ14739 615 aaKnown RBP6.48□□□□□ -1.37
TCN1-201ENST00000257264 GNPTABQ3T906 1256 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 SV2CQ496J9 727 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 NXNQ6DKJ4 435 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 OVOS1Q6IE37 1185 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 TREML4Q6UXN2 200 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 NLRC3Q7RTR2 1065 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 ZNF598Q86UK7 904 aaKnown RBP6.48□□□□□ -1.37
TCN1-201ENST00000257264 ZBTB46Q86UZ6 589 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 CYP4X1Q8N118 509 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 KLHL6Q8WZ60 621 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 BHMTQ93088 406 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 HOOK2Q96ED9 719 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 ARPC5LQ9BPX5 153 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 PUS7LQ9H0K6 701 aaKnown RBP6.48□□□□□ -1.37
TCN1-201ENST00000257264 ARHGEF4Q9NR80 690 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 GNL3LQ9NVN8 582 aaKnown RBP6.48□□□□□ -1.37
TCN1-201ENST00000257264 TOP2BQ02880 1626 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 A0A1W2PQU0 124 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 SLC22A31A6NKX4 558 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 GFRA2O00451 464 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 GPR39O43194 453 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 BRINP1O60477 761 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 WDHD1O75717 1129 aaPredicted RBP6.48□□□□□ -1.37
TCN1-201ENST00000257264 SMNDC1O75940 238 aaKnown RBP eCLIP6.48□□□□□ -1.37
TCN1-201ENST00000257264 NAT2P11245 290 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 ZNF143P52747 638 aaPredicted RBP6.48□□□□□ -1.37
TCN1-201ENST00000257264 ATP11AP98196 1134 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 MLC1Q15049 377 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 DHCR24Q15392 516 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 GFOD2Q3B7J2 385 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 PKDCCQ504Y2 493 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 FAM102BQ5T8I3 360 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 CDCP2Q5VXM1 449 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 MAP1SQ66K74 1059 aaPredicted RBP6.48□□□□□ -1.37
TCN1-201ENST00000257264 ADAMTSL4Q6UY14 1074 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 SVIPQ8NHG7 77 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 SLC9A7Q96T83 725 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 GAS2L1Q99501 681 aaPredicted RBP6.48□□□□□ -1.37
TCN1-201ENST00000257264 CNNM2Q9H8M5 875 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 REV1Q9UBZ9 1251 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 SFMBT1Q9UHJ3 866 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 PNMA2Q9UL42 364 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 ZNF214Q9UL59 606 aaPredicted RBP6.48□□□□□ -1.37
TCN1-201ENST00000257264 SPEF1Q9Y4P9 236 aa6.48□□□□□ -1.37
TCN1-201ENST00000257264 BIVM-ERCC5R4GMW8 1640 aa6.47□□□□□ -1.37
TCN1-201ENST00000257264 DCDC2BA2VCK2 349 aa6.47□□□□□ -1.37
TCN1-201ENST00000257264 TTLL8A6PVC2 850 aa6.47□□□□□ -1.37
TCN1-201ENST00000257264 J3QW42 95 aa6.47□□□□□ -1.37
TCN1-201ENST00000257264 TNFRSF10CO14798 259 aa6.47□□□□□ -1.37
TCN1-201ENST00000257264 GHRHP01286 108 aa6.47□□□□□ -1.37
TCN1-201ENST00000257264 CDC27P30260 824 aa6.47□□□□□ -1.37
TCN1-201ENST00000257264 IRX6P78412 446 aaPredicted RBP6.47□□□□□ -1.37
TCN1-201ENST00000257264 GPLD1P80108 840 aa6.47□□□□□ -1.37
TCN1-201ENST00000257264 FBXO41Q8TF61 875 aa6.47□□□□□ -1.37
TCN1-201ENST00000257264 SCYL1Q96KG9 808 aa6.47□□□□□ -1.37
TCN1-201ENST00000257264 YIPF4Q9BSR8 244 aa6.47□□□□□ -1.37
TCN1-201ENST00000257264 AARSD1Q9BTE6 412 aaKnown RBP6.47□□□□□ -1.37
TCN1-201ENST00000257264 CCDC8Q9H0W5 538 aaPredicted RBP6.47□□□□□ -1.37
TCN1-201ENST00000257264 AVENQ9NQS1 362 aaPredicted RBP6.47□□□□□ -1.37
TCN1-201ENST00000257264 ENAMQ9NRM1 1142 aa6.47□□□□□ -1.37
TCN1-201ENST00000257264 ZNF180Q9UJW8 692 aa6.47□□□□□ -1.37
TCN1-201ENST00000257264 SNCAIPQ9Y6H5 919 aa6.47□□□□□ -1.37
TCN1-201ENST00000257264 ERICH3Q5RHP9 1530 aa6.46□□□□□ -1.37
TCN1-201ENST00000257264 NEK4P51957 841 aa6.46□□□□□ -1.38
TCN1-201ENST00000257264 SUMO1P63165 101 aaKnown RBP6.46□□□□□ -1.38
TCN1-201ENST00000257264 TNP2Q05952 138 aa6.46□□□□□ -1.38
TCN1-201ENST00000257264 AP3B2Q13367 1082 aa6.46□□□□□ -1.38
TCN1-201ENST00000257264 NEUROD1Q13562 356 aa6.46□□□□□ -1.38
TCN1-201ENST00000257264 STAT4Q14765 748 aa6.46□□□□□ -1.38
TCN1-201ENST00000257264 BBS9Q3SYG4 887 aa6.46□□□□□ -1.38
TCN1-201ENST00000257264 C6orf118Q5T5N4 469 aa6.46□□□□□ -1.38
TCN1-201ENST00000257264 YOD1Q5VVQ6 348 aaPredicted RBP6.46□□□□□ -1.38
TCN1-201ENST00000257264 CEP135Q66GS9 1140 aa6.46□□□□□ -1.38
TCN1-201ENST00000257264 MPRIPQ6WCQ1 1025 aa6.46□□□□□ -1.38
TCN1-201ENST00000257264 VN1R5Q7Z5H4 357 aa6.46□□□□□ -1.38
TCN1-201ENST00000257264 PDZD3Q86UT5 571 aa6.46□□□□□ -1.38
TCN1-201ENST00000257264 SPATS2Q86XZ4 545 aaKnown RBP6.46□□□□□ -1.38
TCN1-201ENST00000257264 RTFDC1Q9BY42 306 aaPredicted RBP6.46□□□□□ -1.38
TCN1-201ENST00000257264 STRN4Q9NRL3 753 aa6.46□□□□□ -1.38
TCN1-201ENST00000257264 MARK1Q9P0L2 795 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms