RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 FAM198AQ9UFP1 575 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 ZDHHC9Q9Y397 364 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 SLC12A7Q9Y666 1083 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 NID2Q14112 1375 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 ZBTB43O43298 467 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 RASA1P20936 1047 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 SYT1P21579 422 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 TFAP4Q01664 338 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 DLGAP5Q15398 846 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 FAM47AQ5JRC9 791 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 CLEC17AQ6ZS10 378 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 ZNF444Q8N0Y2 327 aaPredicted RBP11.08□□□□□ -0.64
NIP7-202ENST00000254941 SERPINB13Q9UIV8 391 aa11.08□□□□□ -0.64
NIP7-202ENST00000254941 COL2A1P02458 1487 aaPredicted RBP11.07□□□□□ -0.64
NIP7-202ENST00000254941 GREB1LQ9C091 1923 aaPredicted RBP11.07□□□□□ -0.64
NIP7-202ENST00000254941 STX6O43752 255 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 JAK2O60674 1132 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 DTNBO60941 627 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 ENTPD3O75355 529 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 LMNB1P20700 586 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 PDCP20941 246 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 METAP2P50579 478 aaKnown RBP eCLIP11.07□□□□□ -0.64
NIP7-202ENST00000254941 CACNB3P54284 484 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 EIF6P56537 245 aaKnown RBP11.07□□□□□ -0.64
NIP7-202ENST00000254941 HMGN5P82970 282 aaKnown RBP11.07□□□□□ -0.64
NIP7-202ENST00000254941 NFKBIBQ15653 356 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 IFIT1BQ5T764 474 aaKnown RBP11.07□□□□□ -0.64
NIP7-202ENST00000254941 SYNE3Q6ZMZ3 975 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 ARHGAP27Q6ZUM4 889 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 MICU3Q86XE3 530 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 ZFPM1Q8IX07 1006 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 DPF2Q92785 391 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 ZBED3Q96IU2 234 aaPredicted RBP11.07□□□□□ -0.64
NIP7-202ENST00000254941 EHD4Q9H223 541 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 TCP11L1Q9NUJ3 509 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 TAOK2Q9UL54 1235 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 ATRNL1Q5VV63 1379 aa11.07□□□□□ -0.64
NIP7-202ENST00000254941 WDR33Q9C0J8 1336 aaKnown RBP11.06□□□□□ -0.64
NIP7-202ENST00000254941 NMT2O60551 498 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 HLA-DOAP06340 250 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 TSPY3P0CV98 308 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 TSPY8P0CW00 308 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 ZNF280AP59817 542 aaPredicted RBP11.06□□□□□ -0.64
NIP7-202ENST00000254941 TCP10Q12799 353 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 CCDC178Q5BJE1 867 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 RCSD1Q6JBY9 416 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 ZNF654Q8IZM8 581 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 IL17RBQ9NRM6 502 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 SWAP70Q9UH65 585 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 MYH4Q9Y623 1939 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 PTPDC1A2A3K4 754 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 FXR2P51116 673 aaKnown RBP eCLIP11.06□□□□□ -0.64
NIP7-202ENST00000254941 PPP2R5BQ15173 497 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 SPDYE2Q495Y8 402 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 FKBP1CQ5VVH2 108 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 LARP1BQ659C4 914 aaKnown RBP11.06□□□□□ -0.64
NIP7-202ENST00000254941 DGKHQ86XP1 1220 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 ANKS1AQ92625 1134 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 MYL10Q9BUA6 226 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 FAM217BQ9NTX9 383 aaPredicted RBP11.06□□□□□ -0.64
NIP7-202ENST00000254941 TMOD2Q9NZR1 351 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 PI4KBQ9UBF8 816 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 KIF3AQ9Y496 699 aa11.06□□□□□ -0.64
NIP7-202ENST00000254941 PLIN4Q96Q06 1357 aa11.05□□□□□ -0.64
NIP7-202ENST00000254941 DDTLA6NHG4 134 aaPredicted RBP11.05□□□□□ -0.64
NIP7-202ENST00000254941 GOLGA8AA7E2F4 631 aa11.05□□□□□ -0.64
NIP7-202ENST00000254941 WNT10BO00744 389 aa11.05□□□□□ -0.64
NIP7-202ENST00000254941 CPLX1O14810 134 aa11.05□□□□□ -0.64
NIP7-202ENST00000254941 RXRAP19793 462 aa11.05□□□□□ -0.64
NIP7-202ENST00000254941 KCNA4P22459 653 aa11.05□□□□□ -0.64
NIP7-202ENST00000254941 CDC27P30260 824 aa11.05□□□□□ -0.64
NIP7-202ENST00000254941 ADD1P35611 737 aaKnown RBP11.05□□□□□ -0.64
NIP7-202ENST00000254941 NTRK3Q16288 839 aa11.05□□□□□ -0.64
NIP7-202ENST00000254941 SH3BP5LQ7L8J4 393 aa11.05□□□□□ -0.64
NIP7-202ENST00000254941 METTL16Q86W50 562 aaKnown RBP11.05□□□□□ -0.64
NIP7-202ENST00000254941 RAB11FIP4Q86YS3 637 aa11.05□□□□□ -0.64
NIP7-202ENST00000254941 NEDD1Q8NHV4 660 aa11.05□□□□□ -0.64
NIP7-202ENST00000254941 MYOZ2Q9NPC6 264 aa11.05□□□□□ -0.64
NIP7-202ENST00000254941 ZNF70Q9UC06 446 aaPredicted RBP11.05□□□□□ -0.64
NIP7-202ENST00000254941 BAZ2BQ9UIF8 2168 aaKnown RBP11.05□□□□□ -0.64
NIP7-202ENST00000254941 CCDC196A0A1B0GTZ2 297 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 MYO1BO43795 1136 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 ZSCAN22P10073 491 aaPredicted RBP11.04□□□□□ -0.64
NIP7-202ENST00000254941 YBX3P16989 372 aaKnown RBP eCLIP11.04□□□□□ -0.64
NIP7-202ENST00000254941 GMPSP49915 693 aaPredicted RBP11.04□□□□□ -0.64
NIP7-202ENST00000254941 TROAPQ12815 778 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 CPLX2Q6PUV4 134 aaKnown RBP11.04□□□□□ -0.64
NIP7-202ENST00000254941 CATIPQ7Z7H3 387 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 FAM184AQ8NB25 1140 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 FANCBQ8NB91 859 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 DDX11Q96FC9 970 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 GBP4Q96PP9 640 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 MTMR6Q9Y217 621 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 ZNF541Q9H0D2 1346 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 SHTN1A0MZ66 631 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 CLRN2A0PK11 232 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 CDKL5O76039 1030 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 DDAH1O94760 285 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 CALM1P0DP23 149 aa11.04□□□□□ -0.64
NIP7-202ENST00000254941 CALM2P0DP24 149 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms