RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 CCDC178Q5BJE1 867 aa17.97■□□□□ 0.47
RFX1-201ENST00000254325 PCP11498 1178 aaKnown RBP17.96■□□□□ 0.47
RFX1-201ENST00000254325 PIK3AP1Q6ZUJ8 805 aa17.96■□□□□ 0.47
RFX1-201ENST00000254325 STK36Q9NRP7 1315 aa17.96■□□□□ 0.47
RFX1-201ENST00000254325 RC3H1Q5TC82 1133 aaKnown RBP17.96■□□□□ 0.47
RFX1-201ENST00000254325 ENAHQ8N8S7 591 aaPredicted RBP17.96■□□□□ 0.47
RFX1-201ENST00000254325 CYP2D6P10635 497 aa17.96■□□□□ 0.47
RFX1-201ENST00000254325 KLRK1P26718 216 aa17.96■□□□□ 0.47
RFX1-201ENST00000254325 CALML3P27482 149 aa17.96■□□□□ 0.47
RFX1-201ENST00000254325 LEMD3Q9Y2U8 911 aa17.96■□□□□ 0.47
RFX1-201ENST00000254325 XDHP47989 1333 aa17.95■□□□□ 0.46
RFX1-201ENST00000254325 USP17L8P0C7I0 530 aa17.95■□□□□ 0.46
RFX1-201ENST00000254325 RBM6P78332 1123 aaKnown RBP17.95■□□□□ 0.46
RFX1-201ENST00000254325 UBE2Q2LH0YL09 131 aa17.95■□□□□ 0.46
RFX1-201ENST00000254325 DYNC1I1O14576 645 aa17.95■□□□□ 0.46
RFX1-201ENST00000254325 SNW1Q13573 536 aaKnown RBP17.95■□□□□ 0.46
RFX1-201ENST00000254325 DIXDC1Q155Q3 683 aa17.95■□□□□ 0.46
RFX1-201ENST00000254325 MAP7D2Q96T17 732 aa17.95■□□□□ 0.46
RFX1-201ENST00000254325 SERTAD1Q9UHV2 236 aa17.95■□□□□ 0.46
RFX1-201ENST00000254325 MPHOSPH10O00566 681 aaKnown RBP17.95■□□□□ 0.46
RFX1-201ENST00000254325 TTC38Q5R3I4 469 aa17.95■□□□□ 0.46
RFX1-201ENST00000254325 KRBA2Q6ZNG9 492 aa17.95■□□□□ 0.46
RFX1-201ENST00000254325 ILDR1Q86SU0 546 aaPredicted RBP17.95■□□□□ 0.46
RFX1-201ENST00000254325 CCDC150Q8NCX0 1101 aa17.95■□□□□ 0.46
RFX1-201ENST00000254325 MRFAP1L1Q96HT8 127 aa17.95■□□□□ 0.46
RFX1-201ENST00000254325 ZNF219Q9P2Y4 722 aaPredicted RBP17.95■□□□□ 0.46
RFX1-201ENST00000254325 WDHD1O75717 1129 aaPredicted RBP17.94■□□□□ 0.46
RFX1-201ENST00000254325 PLCG2P16885 1265 aa17.94■□□□□ 0.46
RFX1-201ENST00000254325 GRAPQ13588 217 aa17.94■□□□□ 0.46
RFX1-201ENST00000254325 CTR9Q6PD62 1173 aa17.94■□□□□ 0.46
RFX1-201ENST00000254325 ADGRA1Q86SQ6 560 aa17.94■□□□□ 0.46
RFX1-201ENST00000254325 ZSCAN29Q8IWY8 852 aaPredicted RBP17.94■□□□□ 0.46
RFX1-201ENST00000254325 SEPT12Q8IYM1 358 aa17.94■□□□□ 0.46
RFX1-201ENST00000254325 GRAPLQ8TC17 118 aaPredicted RBP17.94■□□□□ 0.46
RFX1-201ENST00000254325 DDAH1O94760 285 aa17.94■□□□□ 0.46
RFX1-201ENST00000254325 PLEKHA8P1O95397 391 aa17.94■□□□□ 0.46
RFX1-201ENST00000254325 PTF1AQ7RTS3 328 aa17.94■□□□□ 0.46
RFX1-201ENST00000254325 NSUN4Q96CB9 384 aaKnown RBP17.94■□□□□ 0.46
RFX1-201ENST00000254325 ZC3H12CQ9C0D7 883 aaKnown RBP17.94■□□□□ 0.46
RFX1-201ENST00000254325 XPO4Q9C0E2 1151 aaKnown RBP17.94■□□□□ 0.46
RFX1-201ENST00000254325 RRP9O43818 475 aaKnown RBP17.94■□□□□ 0.46
RFX1-201ENST00000254325 FANCCQ00597 558 aa17.94■□□□□ 0.46
RFX1-201ENST00000254325 POSTNQ15063 836 aa17.94■□□□□ 0.46
RFX1-201ENST00000254325 AEBP2Q6ZN18 517 aaPredicted RBP17.94■□□□□ 0.46
RFX1-201ENST00000254325 DCP1AQ9NPI6 582 aaPredicted RBP17.94■□□□□ 0.46
RFX1-201ENST00000254325 PPFIBP1Q86W92 1011 aa17.94■□□□□ 0.46
RFX1-201ENST00000254325 PCDHB6Q9Y5E3 794 aa17.94■□□□□ 0.46
RFX1-201ENST00000254325 FAM177A1Q8N128 213 aaPredicted RBP17.93■□□□□ 0.46
RFX1-201ENST00000254325 ENGASEQ8NFI3 743 aa17.93■□□□□ 0.46
RFX1-201ENST00000254325 MTA3Q9BTC8 594 aa17.93■□□□□ 0.46
RFX1-201ENST00000254325 CCP110O43303 1012 aa17.93■□□□□ 0.46
RFX1-201ENST00000254325 SERPINB2P05120 415 aa17.93■□□□□ 0.46
RFX1-201ENST00000254325 NFIXQ14938 502 aa17.93■□□□□ 0.46
RFX1-201ENST00000254325 MFSD14BQ5SR56 506 aa17.93■□□□□ 0.46
RFX1-201ENST00000254325 MTERF4Q7Z6M4 381 aaKnown RBP17.93■□□□□ 0.46
RFX1-201ENST00000254325 CCDC148Q8NFR7 591 aa17.93■□□□□ 0.46
RFX1-201ENST00000254325 KIAA1524Q8TCG1 905 aa17.93■□□□□ 0.46
RFX1-201ENST00000254325 PCDHA5Q9Y5H7 936 aa17.93■□□□□ 0.46
RFX1-201ENST00000254325 NMT2O60551 498 aa17.93■□□□□ 0.46
RFX1-201ENST00000254325 FBXO33Q7Z6M2 555 aa17.93■□□□□ 0.46
RFX1-201ENST00000254325 PNMA1Q8ND90 353 aa17.93■□□□□ 0.46
RFX1-201ENST00000254325 ZNF622Q969S3 477 aaKnown RBP eCLIP17.93■□□□□ 0.46
RFX1-201ENST00000254325 TIGD1Q96MW7 591 aa17.93■□□□□ 0.46
RFX1-201ENST00000254325 TUBGCP6Q96RT7 1819 aa17.93■□□□□ 0.46
RFX1-201ENST00000254325 AP5Z1O43299 807 aa17.92■□□□□ 0.46
RFX1-201ENST00000254325 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.92■□□□□ 0.46
RFX1-201ENST00000254325 TRPC5Q9UL62 973 aaPredicted RBP17.92■□□□□ 0.46
RFX1-201ENST00000254325 UBA7P41226 1012 aa17.92■□□□□ 0.46
RFX1-201ENST00000254325 TSR1Q2NL82 804 aaKnown RBP17.92■□□□□ 0.46
RFX1-201ENST00000254325 OXER1Q8TDS5 423 aa17.92■□□□□ 0.46
RFX1-201ENST00000254325 ROBO1Q9Y6N7 1651 aa17.92■□□□□ 0.46
RFX1-201ENST00000254325 IKQ13123 557 aaPredicted RBP17.92■□□□□ 0.46
RFX1-201ENST00000254325 RBM43Q6ZSC3 357 aaKnown RBP17.92■□□□□ 0.46
RFX1-201ENST00000254325 DYNLL2Q96FJ2 89 aa17.92■□□□□ 0.46
RFX1-201ENST00000254325 SCG2P13521 617 aa17.91■□□□□ 0.46
RFX1-201ENST00000254325 NAPAP54920 295 aa17.91■□□□□ 0.46
RFX1-201ENST00000254325 STX17P56962 302 aa17.91■□□□□ 0.46
RFX1-201ENST00000254325 LONRF3Q496Y0 759 aa17.91■□□□□ 0.46
RFX1-201ENST00000254325 SLC10A5Q5PT55 438 aa17.91■□□□□ 0.46
RFX1-201ENST00000254325 CEP135Q66GS9 1140 aa17.91■□□□□ 0.46
RFX1-201ENST00000254325 CACTINQ8WUQ7 758 aaKnown RBP17.91■□□□□ 0.46
RFX1-201ENST00000254325 PCMTD1Q96MG8 357 aaPredicted RBP17.91■□□□□ 0.46
RFX1-201ENST00000254325 TERF1P54274 439 aa17.91■□□□□ 0.46
RFX1-201ENST00000254325 CCDC12Q8WUD4 166 aaPredicted RBP17.91■□□□□ 0.46
RFX1-201ENST00000254325 CDK5RAP3Q96JB5 506 aa17.91■□□□□ 0.46
RFX1-201ENST00000254325 GJD4Q96KN9 370 aaPredicted RBP17.91■□□□□ 0.46
RFX1-201ENST00000254325 ATP2B4P23634 1241 aa17.91■□□□□ 0.46
RFX1-201ENST00000254325 PRPF3O43395 683 aaKnown RBP17.91■□□□□ 0.46
RFX1-201ENST00000254325 HMGB2P26583 209 aaKnown RBP17.91■□□□□ 0.46
RFX1-201ENST00000254325 BTDP43251 543 aa17.91■□□□□ 0.46
RFX1-201ENST00000254325 SHC4Q6S5L8 630 aa17.91■□□□□ 0.46
RFX1-201ENST00000254325 U2AF2P26368 475 aaKnown RBP eCLIP17.9■□□□□ 0.46
RFX1-201ENST00000254325 IQCB1Q15051 598 aa17.9■□□□□ 0.46
RFX1-201ENST00000254325 ZNF827Q17R98 1081 aa17.9■□□□□ 0.46
RFX1-201ENST00000254325 KIF18AQ8NI77 898 aa17.9■□□□□ 0.46
RFX1-201ENST00000254325 CSRNP2Q9H175 543 aa17.9■□□□□ 0.46
RFX1-201ENST00000254325 NTRK3Q16288 839 aa17.9■□□□□ 0.46
RFX1-201ENST00000254325 PLA2G4DQ86XP0 818 aa17.9■□□□□ 0.46
RFX1-201ENST00000254325 RIOK1Q9BRS2 568 aaKnown RBP17.9■□□□□ 0.46
RFX1-201ENST00000254325 CRYBG1Q9Y4K1 1723 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms