RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 KCNG1Q9UIX4 513 aa16.9■□□□□ 0.3
UBE4B-201ENST00000253251 CD163L1Q9NR16 1453 aa16.9■□□□□ 0.3
UBE4B-201ENST00000253251 PRPHP41219 470 aa16.9■□□□□ 0.3
UBE4B-201ENST00000253251 RBM6P78332 1123 aaKnown RBP16.9■□□□□ 0.3
UBE4B-201ENST00000253251 TRIM14Q14142 442 aa16.9■□□□□ 0.3
UBE4B-201ENST00000253251 PDIA3P30101 505 aaKnown RBP16.9■□□□□ 0.3
UBE4B-201ENST00000253251 APBB1IPQ7Z5R6 666 aaPredicted RBP16.9■□□□□ 0.3
UBE4B-201ENST00000253251 NOSTRINQ8IVI9 506 aa16.9■□□□□ 0.3
UBE4B-201ENST00000253251 IMPG2Q9BZV3 1241 aa16.9■□□□□ 0.3
UBE4B-201ENST00000253251 SETD1BQ9UPS6 1966 aaKnown RBP16.9■□□□□ 0.3
UBE4B-201ENST00000253251 CYP21A2P08686 494 aa16.89■□□□□ 0.3
UBE4B-201ENST00000253251 TCP10Q12799 353 aa16.89■□□□□ 0.3
UBE4B-201ENST00000253251 COA1Q9GZY4 146 aa16.89■□□□□ 0.3
UBE4B-201ENST00000253251 TRMT1Q9NXH9 659 aaKnown RBP16.89■□□□□ 0.3
UBE4B-201ENST00000253251 LRWD1Q9UFC0 647 aa16.89■□□□□ 0.3
UBE4B-201ENST00000253251 CPDO75976 1380 aa16.89■□□□□ 0.29
UBE4B-201ENST00000253251 LUZP1Q86V48 1076 aa16.89■□□□□ 0.29
UBE4B-201ENST00000253251 GJD4Q96KN9 370 aaPredicted RBP16.89■□□□□ 0.29
UBE4B-201ENST00000253251 USP8P40818 1118 aa16.89■□□□□ 0.29
UBE4B-201ENST00000253251 CNGA4Q8IV77 575 aa16.89■□□□□ 0.29
UBE4B-201ENST00000253251 PLA2G12BQ9BX93 195 aa16.89■□□□□ 0.29
UBE4B-201ENST00000253251 LMBRD1Q9NUN5 540 aa16.89■□□□□ 0.29
UBE4B-201ENST00000253251 MTMR6Q9Y217 621 aa16.89■□□□□ 0.29
UBE4B-201ENST00000253251 TUBB4BP68371 445 aa16.89■□□□□ 0.29
UBE4B-201ENST00000253251 CUL4AQ13619 759 aa16.89■□□□□ 0.29
UBE4B-201ENST00000253251 HLFQ16534 295 aa16.89■□□□□ 0.29
UBE4B-201ENST00000253251 RC3H1Q5TC82 1133 aaKnown RBP16.89■□□□□ 0.29
UBE4B-201ENST00000253251 CARMIL3Q8ND23 1372 aa16.89■□□□□ 0.29
UBE4B-201ENST00000253251 C16orf45Q96MC5 204 aaPredicted RBP16.89■□□□□ 0.29
UBE4B-201ENST00000253251 ZKSCAN5Q9Y2L8 839 aa16.89■□□□□ 0.29
UBE4B-201ENST00000253251 ANKRD62A6NC57 917 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 hCG_1984214I3L0E3 225 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 ZNF202O95125 648 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 SCG2P13521 617 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 CERKLQ49MI3 558 aaPredicted RBP16.88■□□□□ 0.29
UBE4B-201ENST00000253251 GPATCH4Q5T3I0 446 aaKnown RBP16.88■□□□□ 0.29
UBE4B-201ENST00000253251 BLIDQ8IZY5 108 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 ZNF713Q8N859 430 aaPredicted RBP16.88■□□□□ 0.29
UBE4B-201ENST00000253251 CRACR2AQ9BSW2 395 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 RNF26Q9BY78 433 aaPredicted RBP16.88■□□□□ 0.29
UBE4B-201ENST00000253251 NT5C3AQ9H0P0 336 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 DHX36Q9H2U1 1008 aaKnown RBP16.88■□□□□ 0.29
UBE4B-201ENST00000253251 CKAP4Q07065 602 aaKnown RBP16.88■□□□□ 0.29
UBE4B-201ENST00000253251 ENOX2Q16206 610 aaKnown RBP16.88■□□□□ 0.29
UBE4B-201ENST00000253251 BARGINQ6ZT62 677 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 CCDC93Q567U6 631 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 NEK11Q8NG66 645 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 MASTLQ96GX5 879 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 BACH1O14867 736 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 CCDC175P0C221 793 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 CALCRLQ16602 461 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 OTUD7BQ6GQQ9 843 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 FCHSD1Q86WN1 690 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 TAOK3Q9H2K8 898 aa16.88■□□□□ 0.29
UBE4B-201ENST00000253251 ITSN1Q15811 1721 aa16.87■□□□□ 0.29
UBE4B-201ENST00000253251 GNG11P61952 73 aa16.87■□□□□ 0.29
UBE4B-201ENST00000253251 LEKR1Q6ZMV7 388 aa16.87■□□□□ 0.29
UBE4B-201ENST00000253251 RASEFQ8IZ41 740 aa16.87■□□□□ 0.29
UBE4B-201ENST00000253251 SMCO2A6NFE2 343 aa16.87■□□□□ 0.29
UBE4B-201ENST00000253251 NLRP12P59046 1061 aa16.87■□□□□ 0.29
UBE4B-201ENST00000253251 DOK7Q18PE1 504 aa16.87■□□□□ 0.29
UBE4B-201ENST00000253251 TTC12Q9H892 705 aaPredicted RBP16.87■□□□□ 0.29
UBE4B-201ENST00000253251 BCS1LQ9Y276 419 aa16.87■□□□□ 0.29
UBE4B-201ENST00000253251 SLIT1O75093 1534 aa16.87■□□□□ 0.29
UBE4B-201ENST00000253251 KDM3AQ9Y4C1 1321 aa16.87■□□□□ 0.29
UBE4B-201ENST00000253251 TRAPPC10P48553 1259 aa16.87■□□□□ 0.29
UBE4B-201ENST00000253251 ASPRV1Q53RT3 343 aa16.87■□□□□ 0.29
UBE4B-201ENST00000253251 CEP135Q66GS9 1140 aa16.87■□□□□ 0.29
UBE4B-201ENST00000253251 TRMT1LQ7Z2T5 733 aaKnown RBP16.87■□□□□ 0.29
UBE4B-201ENST00000253251 KIAA0825Q8IV33 1275 aa16.87■□□□□ 0.29
UBE4B-201ENST00000253251 VPS54Q9P1Q0 977 aa16.87■□□□□ 0.29
UBE4B-201ENST00000253251 POLR2DO15514 142 aaKnown RBP16.86■□□□□ 0.29
UBE4B-201ENST00000253251 PHACTR2O75167 634 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 RTKN2Q8IZC4 609 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 LMBR1Q8WVP7 490 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 MTA3Q9BTC8 594 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 SRRTQ9BXP5 876 aaKnown RBP16.86■□□□□ 0.29
UBE4B-201ENST00000253251 SRP68Q9UHB9 627 aaKnown RBP16.86■□□□□ 0.29
UBE4B-201ENST00000253251 IQSEC2Q5JU85 1478 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 KLRF2D3W0D1 207 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 M0R2C6 588 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 NEBLO76041 1014 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 TXKP42681 527 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 NOP2P46087 812 aaKnown RBP16.86■□□□□ 0.29
UBE4B-201ENST00000253251 SMTNP53814 917 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 PDE4DQ08499 809 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 RABL6Q3YEC7 729 aaPredicted RBP16.86■□□□□ 0.29
UBE4B-201ENST00000253251 FBXO18Q8NFZ0 1043 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 MMRN2Q9H8L6 949 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 MRPL11Q9Y3B7 192 aaKnown RBP16.86■□□□□ 0.29
UBE4B-201ENST00000253251 SEPT7Q16181 437 aaKnown RBP16.86■□□□□ 0.29
UBE4B-201ENST00000253251 CGNQ9P2M7 1197 aaKnown RBP16.86■□□□□ 0.29
UBE4B-201ENST00000253251 WWC3Q9ULE0 1092 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 KCNJ14Q9UNX9 436 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 CEMIPQ8WUJ3 1361 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 EPHA10Q5JZY3 1008 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 CERKQ8TCT0 537 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 IFNKQ9P0W0 207 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 EXOC7Q9UPT5 735 aa16.86■□□□□ 0.29
UBE4B-201ENST00000253251 LUC7L2Q9Y383 392 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms