RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 CCDC196A0A1B0GTZ2 297 aa20.12■□□□□ 0.81
PCCB-201ENST00000251654 FMNL1O95466 1100 aaPredicted RBP20.12■□□□□ 0.81
PCCB-201ENST00000251654 TGFB2P61812 414 aa20.12■□□□□ 0.81
PCCB-201ENST00000251654 TFAP4Q01664 338 aa20.12■□□□□ 0.81
PCCB-201ENST00000251654 PPP2R5BQ15173 497 aa20.12■□□□□ 0.81
PCCB-201ENST00000251654 CSPP1Q1MSJ5 1256 aa20.12■□□□□ 0.81
PCCB-201ENST00000251654 OTUD7BQ6GQQ9 843 aa20.12■□□□□ 0.81
PCCB-201ENST00000251654 CDC42EP5Q6NZY7 148 aa20.12■□□□□ 0.81
PCCB-201ENST00000251654 ILDR1Q86SU0 546 aaPredicted RBP20.12■□□□□ 0.81
PCCB-201ENST00000251654 TTC6Q86TZ1 520 aa20.12■□□□□ 0.81
PCCB-201ENST00000251654 NUP133Q8WUM0 1156 aa20.12■□□□□ 0.81
PCCB-201ENST00000251654 AIFM3Q96NN9 605 aa20.12■□□□□ 0.81
PCCB-201ENST00000251654 MKNK2Q9HBH9 465 aa20.12■□□□□ 0.81
PCCB-201ENST00000251654 DDX4Q9NQI0 724 aaKnown RBP20.12■□□□□ 0.81
PCCB-201ENST00000251654 IL17RBQ9NRM6 502 aa20.12■□□□□ 0.81
PCCB-201ENST00000251654 MYH6P13533 1939 aa20.12■□□□□ 0.81
PCCB-201ENST00000251654 RASA1P20936 1047 aa20.11■□□□□ 0.81
PCCB-201ENST00000251654 HDLBPQ00341 1268 aaKnown RBP20.11■□□□□ 0.81
PCCB-201ENST00000251654 CATIPQ7Z7H3 387 aa20.11■□□□□ 0.81
PCCB-201ENST00000251654 NBPF11Q86T75 865 aa20.11■□□□□ 0.81
PCCB-201ENST00000251654 UBE2Q2LH0YL09 131 aa20.11■□□□□ 0.81
PCCB-201ENST00000251654 DDAH1O94760 285 aa20.11■□□□□ 0.81
PCCB-201ENST00000251654 POLD1P28340 1107 aa20.11■□□□□ 0.81
PCCB-201ENST00000251654 UBE2HP62256 183 aa20.11■□□□□ 0.81
PCCB-201ENST00000251654 R3HDM1Q15032 1099 aaKnown RBP20.11■□□□□ 0.81
PCCB-201ENST00000251654 ALG1Q9BT22 464 aa20.11■□□□□ 0.81
PCCB-201ENST00000251654 SCAND2PQ9GZW5 306 aaPredicted RBP20.11■□□□□ 0.81
PCCB-201ENST00000251654 USP40Q9NVE5 1235 aa20.11■□□□□ 0.81
PCCB-201ENST00000251654 UTRNP46939 3433 aa20.11■□□□□ 0.81
PCCB-201ENST00000251654 MYH8P13535 1937 aa20.11■□□□□ 0.81
PCCB-201ENST00000251654 FER1L6Q2WGJ9 1857 aa20.1■□□□□ 0.81
PCCB-201ENST00000251654 CDK8P49336 464 aa20.1■□□□□ 0.81
PCCB-201ENST00000251654 PICALMQ13492 652 aa20.1■□□□□ 0.81
PCCB-201ENST00000251654 SLC26A6Q9BXS9 759 aa20.1■□□□□ 0.81
PCCB-201ENST00000251654 ZNF287Q9HBT7 754 aa20.1■□□□□ 0.81
PCCB-201ENST00000251654 TMEM63CQ9P1W3 806 aa20.1■□□□□ 0.81
PCCB-201ENST00000251654 CALM1P0DP23 149 aa20.09■□□□□ 0.81
PCCB-201ENST00000251654 CALM2P0DP24 149 aa20.09■□□□□ 0.81
PCCB-201ENST00000251654 CALM3P0DP25 149 aa20.09■□□□□ 0.81
PCCB-201ENST00000251654 SSRP1Q08945 709 aaKnown RBP20.09■□□□□ 0.81
PCCB-201ENST00000251654 CMTR1Q8N1G2 835 aaKnown RBP20.09■□□□□ 0.81
PCCB-201ENST00000251654 CRACR2BQ8N4Y2 399 aaPredicted RBP20.09■□□□□ 0.81
PCCB-201ENST00000251654 ANKS1AQ92625 1134 aa20.09■□□□□ 0.81
PCCB-201ENST00000251654 SGIP1Q9BQI5 828 aa20.09■□□□□ 0.81
PCCB-201ENST00000251654 TCP11L1Q9NUJ3 509 aa20.09■□□□□ 0.81
PCCB-201ENST00000251654 PIM2Q9P1W9 311 aa20.09■□□□□ 0.81
PCCB-201ENST00000251654 RBM27Q9P2N5 1060 aaKnown RBP20.09■□□□□ 0.81
PCCB-201ENST00000251654 TFIP11Q9UBB9 837 aaKnown RBP20.09■□□□□ 0.81
PCCB-201ENST00000251654 PCDHAC2Q9Y5I4 1007 aa20.09■□□□□ 0.81
PCCB-201ENST00000251654 FSD2A1L4K1 749 aa20.09■□□□□ 0.81
PCCB-201ENST00000251654 FUT2Q10981 343 aa20.09■□□□□ 0.81
PCCB-201ENST00000251654 DGKHQ86XP1 1220 aa20.09■□□□□ 0.81
PCCB-201ENST00000251654 LEO1Q8WVC0 666 aaPredicted RBP20.09■□□□□ 0.81
PCCB-201ENST00000251654 ZNF277Q9NRM2 450 aaPredicted RBP20.09■□□□□ 0.81
PCCB-201ENST00000251654 SERPINA10Q9UK55 444 aa20.09■□□□□ 0.81
PCCB-201ENST00000251654 TSPY3P0CV98 308 aa20.08■□□□□ 0.8
PCCB-201ENST00000251654 TSPY8P0CW00 308 aa20.08■□□□□ 0.8
PCCB-201ENST00000251654 GUCY1A2P33402 732 aa20.08■□□□□ 0.8
PCCB-201ENST00000251654 GABPAQ06546 454 aa20.08■□□□□ 0.8
PCCB-201ENST00000251654 NFIAQ12857 509 aa20.08■□□□□ 0.8
PCCB-201ENST00000251654 ZSCAN23Q3MJ62 389 aa20.08■□□□□ 0.8
PCCB-201ENST00000251654 SOGA3Q5TF21 947 aa20.08■□□□□ 0.8
PCCB-201ENST00000251654 ZNF444Q8N0Y2 327 aaPredicted RBP20.08■□□□□ 0.8
PCCB-201ENST00000251654 OSBPL5Q9H0X9 879 aaPredicted RBP20.08■□□□□ 0.8
PCCB-201ENST00000251654 SIPA1L1O43166 1804 aa20.07■□□□□ 0.8
PCCB-201ENST00000251654 KIF23Q02241 960 aaPredicted RBP20.07■□□□□ 0.8
PCCB-201ENST00000251654 TRIM22Q8IYM9 498 aa20.07■□□□□ 0.8
PCCB-201ENST00000251654 RBM28Q9NW13 759 aaKnown RBP20.07■□□□□ 0.8
PCCB-201ENST00000251654 KRT40Q6A162 431 aa20.06■□□□□ 0.8
PCCB-201ENST00000251654 LARGE2Q8N3Y3 721 aa20.06■□□□□ 0.8
PCCB-201ENST00000251654 CCDC82Q8N4S0 544 aa20.06■□□□□ 0.8
PCCB-201ENST00000251654 UPF1Q92900 1129 aaKnown RBP eCLIP20.06■□□□□ 0.8
PCCB-201ENST00000251654 SPATA32Q96LK8 384 aa20.06■□□□□ 0.8
PCCB-201ENST00000251654 RNF26Q9BY78 433 aaPredicted RBP20.06■□□□□ 0.8
PCCB-201ENST00000251654 VPS33BQ9H267 617 aa20.06■□□□□ 0.8
PCCB-201ENST00000251654 KIF28PB7ZC32 967 aa20.06■□□□□ 0.8
PCCB-201ENST00000251654 PLEKHA8P1O95397 391 aa20.06■□□□□ 0.8
PCCB-201ENST00000251654 DEXIO95424 95 aa20.06■□□□□ 0.8
PCCB-201ENST00000251654 CCDC178Q5BJE1 867 aa20.06■□□□□ 0.8
PCCB-201ENST00000251654 ATL3Q6DD88 541 aa20.06■□□□□ 0.8
PCCB-201ENST00000251654 WASF1Q92558 559 aa20.06■□□□□ 0.8
PCCB-201ENST00000251654 CFAP45Q9UL16 551 aa20.06■□□□□ 0.8
PCCB-201ENST00000251654 DALRD3Q5D0E6 543 aaKnown RBP20.05■□□□□ 0.8
PCCB-201ENST00000251654 TMTC3Q6ZXV5 915 aa20.05■□□□□ 0.8
PCCB-201ENST00000251654 BRAPQ7Z569 592 aa20.05■□□□□ 0.8
PCCB-201ENST00000251654 NEDD1Q8NHV4 660 aa20.05■□□□□ 0.8
PCCB-201ENST00000251654 USP28Q96RU2 1077 aa20.05■□□□□ 0.8
PCCB-201ENST00000251654 FTOQ9C0B1 505 aaKnown RBP eCLIP20.05■□□□□ 0.8
PCCB-201ENST00000251654 PLIN4Q96Q06 1357 aa20.05■□□□□ 0.8
PCCB-201ENST00000251654 ZNF445P59923 1031 aa20.04■□□□□ 0.8
PCCB-201ENST00000251654 PNMA1Q8ND90 353 aa20.04■□□□□ 0.8
PCCB-201ENST00000251654 IDI2Q9BXS1 227 aa20.04■□□□□ 0.8
PCCB-201ENST00000251654 KAT14Q9H8E8 782 aa20.04■□□□□ 0.8
PCCB-201ENST00000251654 MYO3BQ8WXR4 1341 aa20.04■□□□□ 0.8
PCCB-201ENST00000251654 RBM5P52756 815 aaKnown RBP eCLIP20.04■□□□□ 0.8
PCCB-201ENST00000251654 RSBN1LQ6PCB5 846 aaPredicted RBP20.04■□□□□ 0.8
PCCB-201ENST00000251654 GAS2L3Q86XJ1 694 aa20.04■□□□□ 0.8
PCCB-201ENST00000251654 CTCFLQ8NI51 663 aaPredicted RBP20.04■□□□□ 0.8
PCCB-201ENST00000251654 SERPINB13Q9UIV8 391 aa20.04■□□□□ 0.8
PCCB-201ENST00000251654 GREB1LQ9C091 1923 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms