RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 WTAPQ15007 396 aa27.21■■□□□ 1.95
SYNGR3-201ENST00000248121 SEC23AQ15436 765 aa27.21■■□□□ 1.95
SYNGR3-201ENST00000248121 CCDC183Q5T5S1 534 aa27.21■■□□□ 1.95
SYNGR3-201ENST00000248121 APOBEC3HQ6NTF7 200 aaKnown RBP27.21■■□□□ 1.95
SYNGR3-201ENST00000248121 ESR2Q92731 530 aa27.21■■□□□ 1.95
SYNGR3-201ENST00000248121 C8orf76Q96K31 380 aa27.21■■□□□ 1.95
SYNGR3-201ENST00000248121 IARSP41252 1262 aaKnown RBP27.21■■□□□ 1.95
SYNGR3-201ENST00000248121 SART3Q15020 963 aaKnown RBP27.21■■□□□ 1.95
SYNGR3-201ENST00000248121 C12orf60Q5U649 245 aa27.21■■□□□ 1.95
SYNGR3-201ENST00000248121 DDX4Q9NQI0 724 aaKnown RBP27.21■■□□□ 1.95
SYNGR3-201ENST00000248121 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.21■■□□□ 1.95
SYNGR3-201ENST00000248121 FKBP1AP62942 108 aaKnown RBP27.2■■□□□ 1.95
SYNGR3-201ENST00000248121 SOGA3Q5TF21 947 aa27.2■■□□□ 1.95
SYNGR3-201ENST00000248121 PHKBQ93100 1093 aa27.2■■□□□ 1.95
SYNGR3-201ENST00000248121 TEKT1Q969V4 418 aa27.2■■□□□ 1.95
SYNGR3-201ENST00000248121 AIFM3Q96NN9 605 aa27.2■■□□□ 1.95
SYNGR3-201ENST00000248121 FTOQ9C0B1 505 aaKnown RBP eCLIP27.2■■□□□ 1.95
SYNGR3-201ENST00000248121 PSMD14O00487 310 aa27.2■■□□□ 1.94
SYNGR3-201ENST00000248121 PICALMQ13492 652 aa27.2■■□□□ 1.94
SYNGR3-201ENST00000248121 PGBD1Q96JS3 809 aa27.2■■□□□ 1.94
SYNGR3-201ENST00000248121 WDHD1O75717 1129 aaPredicted RBP27.19■■□□□ 1.94
SYNGR3-201ENST00000248121 PRELPP51888 382 aa27.19■■□□□ 1.94
SYNGR3-201ENST00000248121 RASSF7Q02833 373 aa27.19■■□□□ 1.94
SYNGR3-201ENST00000248121 SLC44A5Q8NCS7 719 aa27.19■■□□□ 1.94
SYNGR3-201ENST00000248121 TAOK3Q9H2K8 898 aa27.19■■□□□ 1.94
SYNGR3-201ENST00000248121 TNKSO95271 1327 aa27.19■■□□□ 1.94
SYNGR3-201ENST00000248121 CDKL5O76039 1030 aa27.18■■□□□ 1.94
SYNGR3-201ENST00000248121 CDC42EP5Q6NZY7 148 aa27.18■■□□□ 1.94
SYNGR3-201ENST00000248121 HHIPL2Q6UWX4 724 aa27.18■■□□□ 1.94
SYNGR3-201ENST00000248121 ZBTB12Q9Y330 459 aaPredicted RBP27.18■■□□□ 1.94
SYNGR3-201ENST00000248121 PCP11498 1178 aaKnown RBP27.18■■□□□ 1.94
SYNGR3-201ENST00000248121 PLCG2P16885 1265 aa27.18■■□□□ 1.94
SYNGR3-201ENST00000248121 USP28Q96RU2 1077 aa27.18■■□□□ 1.94
SYNGR3-201ENST00000248121 UBAC1Q9BSL1 405 aa27.18■■□□□ 1.94
SYNGR3-201ENST00000248121 SPON1Q9HCB6 807 aa27.18■■□□□ 1.94
SYNGR3-201ENST00000248121 CFAP45Q9UL16 551 aa27.18■■□□□ 1.94
SYNGR3-201ENST00000248121 ERICH2A1L162 156 aa27.17■■□□□ 1.94
SYNGR3-201ENST00000248121 LIG1P18858 919 aa27.17■■□□□ 1.94
SYNGR3-201ENST00000248121 CACNB3P54284 484 aa27.17■■□□□ 1.94
SYNGR3-201ENST00000248121 USP40Q9NVE5 1235 aa27.17■■□□□ 1.94
SYNGR3-201ENST00000248121 ROBO3Q96MS0 1386 aa27.17■■□□□ 1.94
SYNGR3-201ENST00000248121 UBE2Q2LH0YL09 131 aa27.17■■□□□ 1.94
SYNGR3-201ENST00000248121 NASPP49321 788 aaPredicted RBP27.17■■□□□ 1.94
SYNGR3-201ENST00000248121 TMTC2Q8N394 836 aa27.17■■□□□ 1.94
SYNGR3-201ENST00000248121 ENAHQ8N8S7 591 aaPredicted RBP27.17■■□□□ 1.94
SYNGR3-201ENST00000248121 CEBPZQ03701 1054 aaKnown RBP27.16■■□□□ 1.94
SYNGR3-201ENST00000248121 NFIAQ12857 509 aa27.16■■□□□ 1.94
SYNGR3-201ENST00000248121 FAM47AQ5JRC9 791 aa27.16■■□□□ 1.94
SYNGR3-201ENST00000248121 CPLX2Q6PUV4 134 aaKnown RBP27.16■■□□□ 1.94
SYNGR3-201ENST00000248121 ZDHHC15Q96MV8 337 aa27.16■■□□□ 1.94
SYNGR3-201ENST00000248121 ALG1Q9BT22 464 aa27.16■■□□□ 1.94
SYNGR3-201ENST00000248121 ORC4O43929 436 aa27.15■■□□□ 1.94
SYNGR3-201ENST00000248121 SYNE3Q6ZMZ3 975 aa27.15■■□□□ 1.94
SYNGR3-201ENST00000248121 CERS3Q8IU89 383 aa27.15■■□□□ 1.94
SYNGR3-201ENST00000248121 NIM1KQ8IY84 436 aa27.15■■□□□ 1.94
SYNGR3-201ENST00000248121 ZNF654Q8IZM8 581 aa27.15■■□□□ 1.94
SYNGR3-201ENST00000248121 RGS22Q8NE09 1264 aa27.15■■□□□ 1.94
SYNGR3-201ENST00000248121 ZSCAN10Q96SZ4 725 aaPredicted RBP27.15■■□□□ 1.94
SYNGR3-201ENST00000248121 RCOR1Q9UKL0 485 aa27.15■■□□□ 1.94
SYNGR3-201ENST00000248121 SIPA1L1O43166 1804 aa27.15■■□□□ 1.94
SYNGR3-201ENST00000248121 KIF28PB7ZC32 967 aa27.15■■□□□ 1.94
SYNGR3-201ENST00000248121 NMT2O60551 498 aa27.15■■□□□ 1.94
SYNGR3-201ENST00000248121 RBM5P52756 815 aaKnown RBP eCLIP27.15■■□□□ 1.94
SYNGR3-201ENST00000248121 RSBN1LQ6PCB5 846 aaPredicted RBP27.15■■□□□ 1.94
SYNGR3-201ENST00000248121 POLR3DP05423 398 aaPredicted RBP27.14■■□□□ 1.94
SYNGR3-201ENST00000248121 IFNAR1P17181 557 aa27.14■■□□□ 1.94
SYNGR3-201ENST00000248121 RCAN1P53805 252 aa27.14■■□□□ 1.94
SYNGR3-201ENST00000248121 ZNRF3Q9ULT6 936 aa27.14■■□□□ 1.94
SYNGR3-201ENST00000248121 VIL1P09327 827 aaKnown RBP27.13■■□□□ 1.93
SYNGR3-201ENST00000248121 KIF23Q02241 960 aaPredicted RBP27.13■■□□□ 1.93
SYNGR3-201ENST00000248121 RTN1Q16799 776 aa27.13■■□□□ 1.93
SYNGR3-201ENST00000248121 ATL3Q6DD88 541 aa27.13■■□□□ 1.93
SYNGR3-201ENST00000248121 FHDC1Q9C0D6 1143 aaPredicted RBP27.13■■□□□ 1.93
SYNGR3-201ENST00000248121 STK36Q9NRP7 1315 aa27.13■■□□□ 1.93
SYNGR3-201ENST00000248121 GMLQ99445 158 aa27.13■■□□□ 1.93
SYNGR3-201ENST00000248121 FMNL1O95466 1100 aaPredicted RBP27.12■■□□□ 1.93
SYNGR3-201ENST00000248121 SLURP2P0DP57 97 aa27.12■■□□□ 1.93
SYNGR3-201ENST00000248121 NBPF11Q86T75 865 aa27.12■■□□□ 1.93
SYNGR3-201ENST00000248121 ZFPM1Q8IX07 1006 aa27.12■■□□□ 1.93
SYNGR3-201ENST00000248121 FANCBQ8NB91 859 aa27.12■■□□□ 1.93
SYNGR3-201ENST00000248121 ZNF396Q96N95 335 aaPredicted RBP27.12■■□□□ 1.93
SYNGR3-201ENST00000248121 TSPY26PQ9H489 355 aa27.12■■□□□ 1.93
SYNGR3-201ENST00000248121 MYH8P13535 1937 aa27.12■■□□□ 1.93
SYNGR3-201ENST00000248121 CXCL9Q07325 125 aa27.12■■□□□ 1.93
SYNGR3-201ENST00000248121 SLC26A6Q9BXS9 759 aa27.12■■□□□ 1.93
SYNGR3-201ENST00000248121 VPS33BQ9H267 617 aa27.12■■□□□ 1.93
SYNGR3-201ENST00000248121 CFAP100Q494V2 611 aa27.11■■□□□ 1.93
SYNGR3-201ENST00000248121 KRT40Q6A162 431 aa27.11■■□□□ 1.93
SYNGR3-201ENST00000248121 SERPINA10Q9UK55 444 aa27.11■■□□□ 1.93
SYNGR3-201ENST00000248121 GUCY1A2P33402 732 aa27.1■■□□□ 1.93
SYNGR3-201ENST00000248121 SSRP1Q08945 709 aaKnown RBP27.1■■□□□ 1.93
SYNGR3-201ENST00000248121 NUP133Q8WUM0 1156 aa27.1■■□□□ 1.93
SYNGR3-201ENST00000248121 GOLGA6L4A6NEF3 574 aa27.1■■□□□ 1.93
SYNGR3-201ENST00000248121 LETM1O95202 739 aaPredicted RBP27.1■■□□□ 1.93
SYNGR3-201ENST00000248121 HDLBPQ00341 1268 aaKnown RBP27.1■■□□□ 1.93
SYNGR3-201ENST00000248121 PDE4BQ07343 736 aa27.1■■□□□ 1.93
SYNGR3-201ENST00000248121 IQCA1Q86XH1 822 aa27.1■■□□□ 1.93
SYNGR3-201ENST00000248121 CMTR1Q8N1G2 835 aaKnown RBP27.1■■□□□ 1.93
SYNGR3-201ENST00000248121 MRIQ9BWK5 157 aa27.1■■□□□ 1.93
SYNGR3-201ENST00000248121 SHTN1A0MZ66 631 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms