RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 TMEM87AQ8NBN3 555 aa16.56■□□□□ 0.24
SDF2-201ENST00000247020 GMLQ99445 158 aa16.56■□□□□ 0.24
SDF2-201ENST00000247020 MAP3K14Q99558 947 aa16.56■□□□□ 0.24
SDF2-201ENST00000247020 EHD4Q9H223 541 aa16.56■□□□□ 0.24
SDF2-201ENST00000247020 DHX36Q9H2U1 1008 aaKnown RBP16.56■□□□□ 0.24
SDF2-201ENST00000247020 SAP30BPQ9UHR5 308 aaKnown RBP16.56■□□□□ 0.24
SDF2-201ENST00000247020 SIPA1L1O43166 1804 aa16.56■□□□□ 0.24
SDF2-201ENST00000247020 PLIN4Q96Q06 1357 aa16.56■□□□□ 0.24
SDF2-201ENST00000247020 GREB1LQ9C091 1923 aaPredicted RBP16.56■□□□□ 0.24
SDF2-201ENST00000247020 PSDA5PKW4 1024 aaPredicted RBP16.55■□□□□ 0.24
SDF2-201ENST00000247020 HLA-DOAP06340 250 aa16.55■□□□□ 0.24
SDF2-201ENST00000247020 RASA1P20936 1047 aa16.55■□□□□ 0.24
SDF2-201ENST00000247020 CDC27P30260 824 aa16.55■□□□□ 0.24
SDF2-201ENST00000247020 GABPAQ06546 454 aa16.55■□□□□ 0.24
SDF2-201ENST00000247020 CSPP1Q1MSJ5 1256 aa16.55■□□□□ 0.24
SDF2-201ENST00000247020 FOXD4L5Q5VV16 416 aaPredicted RBP16.55■□□□□ 0.24
SDF2-201ENST00000247020 FOXD4L4Q8WXT5 416 aaPredicted RBP16.55■□□□□ 0.24
SDF2-201ENST00000247020 WASF1Q92558 559 aa16.55■□□□□ 0.24
SDF2-201ENST00000247020 FAM217BQ9NTX9 383 aaPredicted RBP16.55■□□□□ 0.24
SDF2-201ENST00000247020 ORC3Q9UBD5 711 aaPredicted RBP16.55■□□□□ 0.24
SDF2-201ENST00000247020 PSMD14O00487 310 aa16.55■□□□□ 0.24
SDF2-201ENST00000247020 TRAK2O60296 914 aa16.55■□□□□ 0.24
SDF2-201ENST00000247020 TSPY3P0CV98 308 aa16.55■□□□□ 0.24
SDF2-201ENST00000247020 TSPY8P0CW00 308 aa16.55■□□□□ 0.24
SDF2-201ENST00000247020 ADD1P35611 737 aaKnown RBP16.55■□□□□ 0.24
SDF2-201ENST00000247020 TFAP4Q01664 338 aa16.55■□□□□ 0.24
SDF2-201ENST00000247020 EVX2Q03828 476 aa16.55■□□□□ 0.24
SDF2-201ENST00000247020 FANCBQ8NB91 859 aa16.55■□□□□ 0.24
SDF2-201ENST00000247020 JDP2Q8WYK2 163 aa16.55■□□□□ 0.24
SDF2-201ENST00000247020 DYNLL2Q96FJ2 89 aa16.55■□□□□ 0.24
SDF2-201ENST00000247020 DDX4Q9NQI0 724 aaKnown RBP16.55■□□□□ 0.24
SDF2-201ENST00000247020 LMBRD1Q9NUN5 540 aa16.55■□□□□ 0.24
SDF2-201ENST00000247020 DICER1Q9UPY3 1922 aaKnown RBP16.55■□□□□ 0.24
SDF2-201ENST00000247020 RBM5P52756 815 aaKnown RBP eCLIP16.54■□□□□ 0.24
SDF2-201ENST00000247020 TROAPQ12815 778 aa16.54■□□□□ 0.24
SDF2-201ENST00000247020 PICALMQ13492 652 aa16.54■□□□□ 0.24
SDF2-201ENST00000247020 FAM47AQ5JRC9 791 aa16.54■□□□□ 0.24
SDF2-201ENST00000247020 MTMR14Q8NCE2 650 aa16.54■□□□□ 0.24
SDF2-201ENST00000247020 NEDD1Q8NHV4 660 aa16.54■□□□□ 0.24
SDF2-201ENST00000247020 SPON1Q9HCB6 807 aa16.54■□□□□ 0.24
SDF2-201ENST00000247020 PPP1R1BQ9UD71 204 aaPredicted RBP16.54■□□□□ 0.24
SDF2-201ENST00000247020 NFKBIEO00221 500 aa16.53■□□□□ 0.24
SDF2-201ENST00000247020 ENTPD3O75355 529 aa16.53■□□□□ 0.24
SDF2-201ENST00000247020 FMNL1O95466 1100 aaPredicted RBP16.53■□□□□ 0.24
SDF2-201ENST00000247020 CFAP100Q494V2 611 aa16.53■□□□□ 0.24
SDF2-201ENST00000247020 TRIM22Q8IYM9 498 aa16.53■□□□□ 0.24
SDF2-201ENST00000247020 OGFOD1Q8N543 542 aa16.53■□□□□ 0.24
SDF2-201ENST00000247020 SERPINB13Q9UIV8 391 aa16.53■□□□□ 0.24
SDF2-201ENST00000247020 ATRNL1Q5VV63 1379 aa16.53■□□□□ 0.24
SDF2-201ENST00000247020 RXRAP19793 462 aa16.52■□□□□ 0.24
SDF2-201ENST00000247020 NOVP48745 357 aa16.52■□□□□ 0.24
SDF2-201ENST00000247020 SSRP1Q08945 709 aaKnown RBP16.52■□□□□ 0.24
SDF2-201ENST00000247020 RESTQ13127 1097 aa16.52■□□□□ 0.24
SDF2-201ENST00000247020 KLHL40Q2TBA0 621 aa16.52■□□□□ 0.24
SDF2-201ENST00000247020 ATL3Q6DD88 541 aa16.52■□□□□ 0.24
SDF2-201ENST00000247020 RCSD1Q6JBY9 416 aa16.52■□□□□ 0.24
SDF2-201ENST00000247020 RAB11FIP4Q86YS3 637 aa16.52■□□□□ 0.24
SDF2-201ENST00000247020 FBXO18Q8NFZ0 1043 aa16.52■□□□□ 0.24
SDF2-201ENST00000247020 C8orf76Q96K31 380 aa16.52■□□□□ 0.24
SDF2-201ENST00000247020 MYL10Q9BUA6 226 aa16.52■□□□□ 0.24
SDF2-201ENST00000247020 RNF26Q9BY78 433 aaPredicted RBP16.52■□□□□ 0.24
SDF2-201ENST00000247020 KAT14Q9H8E8 782 aa16.52■□□□□ 0.24
SDF2-201ENST00000247020 BCS1LQ9Y276 419 aa16.52■□□□□ 0.24
SDF2-201ENST00000247020 RAD17O75943 681 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 DEXIO95424 95 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 MBD3O95983 291 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 KRT85P78386 507 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 TNIP1Q15025 636 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 SLC4A8Q2Y0W8 1093 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 PPP4R3BQ5MIZ7 849 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 CIAPIN1Q6FI81 312 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 IL17RBQ9NRM6 502 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 RPS12P25398 132 aaKnown RBP16.51■□□□□ 0.23
SDF2-201ENST00000247020 KIF5BP33176 963 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 FKBP1CQ5VVH2 108 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 CCDC144CPQ8IYA2 1237 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 KLHL34Q8N239 644 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 CRACR2BQ8N4Y2 399 aaPredicted RBP16.51■□□□□ 0.23
SDF2-201ENST00000247020 SLC44A5Q8NCS7 719 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 CTCFLQ8NI51 663 aaPredicted RBP16.51■□□□□ 0.23
SDF2-201ENST00000247020 NUP133Q8WUM0 1156 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 TMOD2Q9NZR1 351 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 FAM198AQ9UFP1 575 aa16.51■□□□□ 0.23
SDF2-201ENST00000247020 ELP1O95163 1332 aa16.5■□□□□ 0.23
SDF2-201ENST00000247020 DTNBO60941 627 aa16.5■□□□□ 0.23
SDF2-201ENST00000247020 PRPF40AO75400 957 aaKnown RBP16.5■□□□□ 0.23
SDF2-201ENST00000247020 CXCL9Q07325 125 aa16.5■□□□□ 0.23
SDF2-201ENST00000247020 NFIAQ12857 509 aa16.5■□□□□ 0.23
SDF2-201ENST00000247020 NBPF11Q86T75 865 aa16.5■□□□□ 0.23
SDF2-201ENST00000247020 CCDC17Q96LX7 622 aa16.5■□□□□ 0.23
SDF2-201ENST00000247020 ALG1Q9BT22 464 aa16.5■□□□□ 0.23
SDF2-201ENST00000247020 SCAND2PQ9GZW5 306 aaPredicted RBP16.5■□□□□ 0.23
SDF2-201ENST00000247020 RBM27Q9P2N5 1060 aaKnown RBP16.5■□□□□ 0.23
SDF2-201ENST00000247020 PI4KBQ9UBF8 816 aa16.5■□□□□ 0.23
SDF2-201ENST00000247020 NMT2O60551 498 aa16.49■□□□□ 0.23
SDF2-201ENST00000247020 GNAQP50148 359 aa16.49■□□□□ 0.23
SDF2-201ENST00000247020 DNM1Q05193 864 aaKnown RBP16.49■□□□□ 0.23
SDF2-201ENST00000247020 DLGAP5Q15398 846 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms