RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 ZNF654Q8IZM8 581 aa21.87■■□□□ 1.09
TNFSF9-201ENST00000245817 NUP133Q8WUM0 1156 aa21.87■■□□□ 1.09
TNFSF9-201ENST00000245817 MYL10Q9BUA6 226 aa21.87■■□□□ 1.09
TNFSF9-201ENST00000245817 DDX4Q9NQI0 724 aaKnown RBP21.87■■□□□ 1.09
TNFSF9-201ENST00000245817 MTMR6Q9Y217 621 aa21.87■■□□□ 1.09
TNFSF9-201ENST00000245817 F13A1P00488 732 aa21.86■■□□□ 1.09
TNFSF9-201ENST00000245817 PPP2R5BQ15173 497 aa21.86■■□□□ 1.09
TNFSF9-201ENST00000245817 MCTP1Q6DN14 999 aa21.86■■□□□ 1.09
TNFSF9-201ENST00000245817 TMOD2Q9NZR1 351 aa21.86■■□□□ 1.09
TNFSF9-201ENST00000245817 CALM1P0DP23 149 aa21.85■■□□□ 1.09
TNFSF9-201ENST00000245817 CALM2P0DP24 149 aa21.85■■□□□ 1.09
TNFSF9-201ENST00000245817 CALM3P0DP25 149 aa21.85■■□□□ 1.09
TNFSF9-201ENST00000245817 ADD1P35611 737 aaKnown RBP21.85■■□□□ 1.09
TNFSF9-201ENST00000245817 CXCL9Q07325 125 aa21.85■■□□□ 1.09
TNFSF9-201ENST00000245817 DLGAP5Q15398 846 aa21.85■■□□□ 1.09
TNFSF9-201ENST00000245817 RTN1Q16799 776 aa21.85■■□□□ 1.09
TNFSF9-201ENST00000245817 IDI2Q9BXS1 227 aa21.85■■□□□ 1.09
TNFSF9-201ENST00000245817 DHX36Q9H2U1 1008 aaKnown RBP21.85■■□□□ 1.09
TNFSF9-201ENST00000245817 SLC44A5Q8NCS7 719 aa21.85■■□□□ 1.09
TNFSF9-201ENST00000245817 GMLQ99445 158 aa21.85■■□□□ 1.09
TNFSF9-201ENST00000245817 ORC3Q9UBD5 711 aaPredicted RBP21.85■■□□□ 1.09
TNFSF9-201ENST00000245817 SWAP70Q9UH65 585 aa21.85■■□□□ 1.09
TNFSF9-201ENST00000245817 ZBTB12Q9Y330 459 aaPredicted RBP21.85■■□□□ 1.09
TNFSF9-201ENST00000245817 PCDHAC2Q9Y5I4 1007 aa21.85■■□□□ 1.09
TNFSF9-201ENST00000245817 RASA1P20936 1047 aa21.84■■□□□ 1.09
TNFSF9-201ENST00000245817 RASSF7Q02833 373 aa21.84■■□□□ 1.09
TNFSF9-201ENST00000245817 DGKHQ86XP1 1220 aa21.84■■□□□ 1.09
TNFSF9-201ENST00000245817 ZSCAN29Q8IWY8 852 aaPredicted RBP21.84■■□□□ 1.09
TNFSF9-201ENST00000245817 TDRD3Q9H7E2 651 aaKnown RBP21.84■■□□□ 1.09
TNFSF9-201ENST00000245817 TCP11L1Q9NUJ3 509 aa21.84■■□□□ 1.09
TNFSF9-201ENST00000245817 SERPINB13Q9UIV8 391 aa21.84■■□□□ 1.09
TNFSF9-201ENST00000245817 NPM3O75607 178 aaKnown RBP21.83■■□□□ 1.09
TNFSF9-201ENST00000245817 CDC27P30260 824 aa21.83■■□□□ 1.09
TNFSF9-201ENST00000245817 EIF6P56537 245 aaKnown RBP21.83■■□□□ 1.09
TNFSF9-201ENST00000245817 TCP10Q12799 353 aa21.83■■□□□ 1.09
TNFSF9-201ENST00000245817 NFIAQ12857 509 aa21.83■■□□□ 1.09
TNFSF9-201ENST00000245817 FANCBQ8NB91 859 aa21.83■■□□□ 1.09
TNFSF9-201ENST00000245817 PRMT6Q96LA8 375 aaPredicted RBP21.83■■□□□ 1.09
TNFSF9-201ENST00000245817 KAT14Q9H8E8 782 aa21.83■■□□□ 1.09
TNFSF9-201ENST00000245817 COL4A5P29400 1685 aa21.83■■□□□ 1.08
TNFSF9-201ENST00000245817 NMT2O60551 498 aa21.82■■□□□ 1.08
TNFSF9-201ENST00000245817 PPFIA3O75145 1194 aa21.82■■□□□ 1.08
TNFSF9-201ENST00000245817 DDAH1O94760 285 aa21.82■■□□□ 1.08
TNFSF9-201ENST00000245817 CACNB3P54284 484 aa21.82■■□□□ 1.08
TNFSF9-201ENST00000245817 TRIM34Q9BYJ4 488 aa21.82■■□□□ 1.08
TNFSF9-201ENST00000245817 NID2Q14112 1375 aa21.82■■□□□ 1.08
TNFSF9-201ENST00000245817 SPDYE2BA6NHP3 402 aa21.82■■□□□ 1.08
TNFSF9-201ENST00000245817 SPDYE6P0CI01 402 aa21.82■■□□□ 1.08
TNFSF9-201ENST00000245817 MMP14P50281 582 aa21.82■■□□□ 1.08
TNFSF9-201ENST00000245817 SSRP1Q08945 709 aaKnown RBP21.82■■□□□ 1.08
TNFSF9-201ENST00000245817 FOXD4L6Q3SYB3 417 aaPredicted RBP21.82■■□□□ 1.08
TNFSF9-201ENST00000245817 FOXD4L3Q6VB84 417 aaPredicted RBP21.82■■□□□ 1.08
TNFSF9-201ENST00000245817 CDC37L1Q7L3B6 337 aa21.82■■□□□ 1.08
TNFSF9-201ENST00000245817 CRACR2BQ8N4Y2 399 aaPredicted RBP21.82■■□□□ 1.08
TNFSF9-201ENST00000245817 RBM28Q9NW13 759 aaKnown RBP21.82■■□□□ 1.08
TNFSF9-201ENST00000245817 LMNB1P20700 586 aa21.81■■□□□ 1.08
TNFSF9-201ENST00000245817 TRIM22Q8IYM9 498 aa21.81■■□□□ 1.08
TNFSF9-201ENST00000245817 PI4KBQ9UBF8 816 aa21.81■■□□□ 1.08
TNFSF9-201ENST00000245817 CDK5RAP2Q96SN8 1893 aa21.81■■□□□ 1.08
TNFSF9-201ENST00000245817 MYO1BO43795 1136 aa21.8■■□□□ 1.08
TNFSF9-201ENST00000245817 ENTPD3O75355 529 aa21.8■■□□□ 1.08
TNFSF9-201ENST00000245817 FDPSP14324 419 aaKnown RBP21.8■■□□□ 1.08
TNFSF9-201ENST00000245817 RPS12P25398 132 aaKnown RBP21.8■■□□□ 1.08
TNFSF9-201ENST00000245817 GABPAQ06546 454 aa21.8■■□□□ 1.08
TNFSF9-201ENST00000245817 NEDD1Q8NHV4 660 aa21.8■■□□□ 1.08
TNFSF9-201ENST00000245817 CTCFLQ8NI51 663 aaPredicted RBP21.8■■□□□ 1.08
TNFSF9-201ENST00000245817 WASF1Q92558 559 aa21.8■■□□□ 1.08
TNFSF9-201ENST00000245817 C8orf76Q96K31 380 aa21.8■■□□□ 1.08
TNFSF9-201ENST00000245817 EHD4Q9H223 541 aa21.8■■□□□ 1.08
TNFSF9-201ENST00000245817 FAM217BQ9NTX9 383 aaPredicted RBP21.8■■□□□ 1.08
TNFSF9-201ENST00000245817 FAM198AQ9UFP1 575 aa21.8■■□□□ 1.08
TNFSF9-201ENST00000245817 MYH1P12882 1939 aa21.8■■□□□ 1.08
TNFSF9-201ENST00000245817 ZNF646O15015 1829 aaPredicted RBP21.8■■□□□ 1.08
TNFSF9-201ENST00000245817 IFNAR1P17181 557 aa21.79■■□□□ 1.08
TNFSF9-201ENST00000245817 FOSBP53539 338 aa21.79■■□□□ 1.08
TNFSF9-201ENST00000245817 SKOR2Q2VWA4 1001 aaPredicted RBP21.79■■□□□ 1.08
TNFSF9-201ENST00000245817 ANKS1AQ92625 1134 aa21.79■■□□□ 1.08
TNFSF9-201ENST00000245817 ZSCAN16Q9H4T2 348 aaPredicted RBP21.79■■□□□ 1.08
TNFSF9-201ENST00000245817 IL17RBQ9NRM6 502 aa21.79■■□□□ 1.08
TNFSF9-201ENST00000245817 TAOK2Q9UL54 1235 aa21.79■■□□□ 1.08
TNFSF9-201ENST00000245817 PSME4Q14997 1843 aa21.79■■□□□ 1.08
TNFSF9-201ENST00000245817 DDX60LQ5H9U9 1706 aaKnown RBP21.79■■□□□ 1.08
TNFSF9-201ENST00000245817 ADAMTSL1Q8N6G6 1762 aa21.79■■□□□ 1.08
TNFSF9-201ENST00000245817 FOCADQ5VW36 1801 aa21.79■■□□□ 1.08
TNFSF9-201ENST00000245817 SBF1O95248 1867 aa21.79■■□□□ 1.08
TNFSF9-201ENST00000245817 FERMT3Q86UX7 667 aa21.79■■□□□ 1.08
TNFSF9-201ENST00000245817 MTMR14Q8NCE2 650 aa21.79■■□□□ 1.08
TNFSF9-201ENST00000245817 SLC26A6Q9BXS9 759 aa21.79■■□□□ 1.08
TNFSF9-201ENST00000245817 STX8Q9UNK0 236 aa21.79■■□□□ 1.08
TNFSF9-201ENST00000245817 AKAP17AQ02040 695 aaKnown RBP21.78■■□□□ 1.08
TNFSF9-201ENST00000245817 NTRK3Q16288 839 aa21.78■■□□□ 1.08
TNFSF9-201ENST00000245817 FOXP4Q8IVH2 680 aaPredicted RBP21.78■■□□□ 1.08
TNFSF9-201ENST00000245817 ZFPM1Q8IX07 1006 aa21.78■■□□□ 1.08
TNFSF9-201ENST00000245817 PHKBQ93100 1093 aa21.78■■□□□ 1.08
TNFSF9-201ENST00000245817 TRAK2O60296 914 aa21.77■■□□□ 1.08
TNFSF9-201ENST00000245817 FMNL1O95466 1100 aaPredicted RBP21.77■■□□□ 1.08
TNFSF9-201ENST00000245817 NCLP19338 710 aaKnown RBP21.77■■□□□ 1.08
TNFSF9-201ENST00000245817 KIF5BP33176 963 aa21.77■■□□□ 1.08
TNFSF9-201ENST00000245817 PRELPP51888 382 aa21.77■■□□□ 1.08
TNFSF9-201ENST00000245817 TROAPQ12815 778 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms