RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 CCDC196A0A1B0GTZ2 297 aa16.51■□□□□ 0.23
HIF3A-202ENST00000244303 MINDY4BA8MYZ0 360 aa16.51■□□□□ 0.23
HIF3A-202ENST00000244303 CBFA2T2O43439 604 aa16.51■□□□□ 0.23
HIF3A-202ENST00000244303 NRDCO43847 1150 aa16.51■□□□□ 0.23
HIF3A-202ENST00000244303 PTPREP23469 700 aa16.51■□□□□ 0.23
HIF3A-202ENST00000244303 PDE4BQ07343 736 aa16.51■□□□□ 0.23
HIF3A-202ENST00000244303 SMIM5Q71RC9 77 aa16.51■□□□□ 0.23
HIF3A-202ENST00000244303 MTA3Q9BTC8 594 aa16.51■□□□□ 0.23
HIF3A-202ENST00000244303 ABCF2Q9UG63 623 aa16.51■□□□□ 0.23
HIF3A-202ENST00000244303 ZNF831Q5JPB2 1677 aa16.51■□□□□ 0.23
HIF3A-202ENST00000244303 CNTNAP4Q9C0A0 1308 aa16.51■□□□□ 0.23
HIF3A-202ENST00000244303 CACNA1SQ13698 1873 aa16.51■□□□□ 0.23
HIF3A-202ENST00000244303 UBAP1LF5GYI3 381 aa16.5■□□□□ 0.23
HIF3A-202ENST00000244303 SMIM22K7EJ46 135 aa16.5■□□□□ 0.23
HIF3A-202ENST00000244303 SF3B3Q15393 1217 aaKnown RBP16.5■□□□□ 0.23
HIF3A-202ENST00000244303 BICDL1Q6ZP65 573 aa16.5■□□□□ 0.23
HIF3A-202ENST00000244303 OXER1Q8TDS5 423 aa16.5■□□□□ 0.23
HIF3A-202ENST00000244303 UBAC1Q9BSL1 405 aa16.5■□□□□ 0.23
HIF3A-202ENST00000244303 CGNQ9P2M7 1197 aaKnown RBP16.5■□□□□ 0.23
HIF3A-202ENST00000244303 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.5■□□□□ 0.23
HIF3A-202ENST00000244303 V9GYY5 206 aaPredicted RBP16.5■□□□□ 0.23
HIF3A-202ENST00000244303 POLR2DO15514 142 aaKnown RBP16.5■□□□□ 0.23
HIF3A-202ENST00000244303 POSTNQ15063 836 aa16.5■□□□□ 0.23
HIF3A-202ENST00000244303 PTPN21Q16825 1174 aa16.5■□□□□ 0.23
HIF3A-202ENST00000244303 ANKRD18AQ8IVF6 992 aa16.5■□□□□ 0.23
HIF3A-202ENST00000244303 ELOA2Q8IYF1 753 aaPredicted RBP16.5■□□□□ 0.23
HIF3A-202ENST00000244303 TNKSO95271 1327 aa16.5■□□□□ 0.23
HIF3A-202ENST00000244303 TMEM232C9JQI7 657 aa16.49■□□□□ 0.23
HIF3A-202ENST00000244303 PRR29P0C7W0 189 aa16.49■□□□□ 0.23
HIF3A-202ENST00000244303 VSTM4Q8IW00 320 aa16.49■□□□□ 0.23
HIF3A-202ENST00000244303 SERTAD1Q9UHV2 236 aa16.49■□□□□ 0.23
HIF3A-202ENST00000244303 HOOK1Q9UJC3 728 aaKnown RBP16.49■□□□□ 0.23
HIF3A-202ENST00000244303 MAN1B1Q9UKM7 699 aa16.49■□□□□ 0.23
HIF3A-202ENST00000244303 MAGEB6P1A0A0J9YX57 407 aa16.49■□□□□ 0.23
HIF3A-202ENST00000244303 ATP2B1P20020 1258 aa16.49■□□□□ 0.23
HIF3A-202ENST00000244303 RCAN1P53805 252 aa16.49■□□□□ 0.23
HIF3A-202ENST00000244303 SEC23AQ15436 765 aa16.49■□□□□ 0.23
HIF3A-202ENST00000244303 TBC1D9BQ66K14 1250 aa16.49■□□□□ 0.23
HIF3A-202ENST00000244303 SYT10Q6XYQ8 523 aa16.49■□□□□ 0.23
HIF3A-202ENST00000244303 RAI14Q9P0K7 980 aa16.49■□□□□ 0.23
HIF3A-202ENST00000244303 DUOX1Q9NRD9 1551 aa16.49■□□□□ 0.23
HIF3A-202ENST00000244303 COL1A1P02452 1464 aaPredicted RBP16.49■□□□□ 0.23
HIF3A-202ENST00000244303 WTIPA6NIX2 430 aaPredicted RBP16.48■□□□□ 0.23
HIF3A-202ENST00000244303 GYG1P46976 350 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 HSP90AA4PQ58FG1 418 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 FNBP4Q8N3X1 1017 aaPredicted RBP16.48■□□□□ 0.23
HIF3A-202ENST00000244303 ESR2Q92731 530 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 ERO1AQ96HE7 468 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 CABP5Q9NP86 173 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 ZNF804BA4D1E1 1349 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 DLEC1Q9Y238 1755 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 RGL2O15211 777 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 MYO1BO43795 1136 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 SLU7O95391 586 aaKnown RBP16.48■□□□□ 0.23
HIF3A-202ENST00000244303 GOLGA8FQ08AF8 430 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 GOLGA8DPQ0D2H9 430 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 SLC10A5Q5PT55 438 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 GRAMD1CQ8IYS0 662 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 PDILTQ8N807 584 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 SHISA4Q96DD7 197 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 FEZ1Q99689 392 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 BSDC1Q9NW68 430 aaPredicted RBP16.48■□□□□ 0.23
HIF3A-202ENST00000244303 ANAPC4Q9UJX5 808 aa16.48■□□□□ 0.23
HIF3A-202ENST00000244303 SRPRBQ9Y5M8 271 aaKnown RBP16.48■□□□□ 0.23
HIF3A-202ENST00000244303 RPS6KA4O75676 772 aa16.47■□□□□ 0.23
HIF3A-202ENST00000244303 TOP1P11387 765 aaKnown RBP16.47■□□□□ 0.23
HIF3A-202ENST00000244303 GTF2E1P29083 439 aaPredicted RBP16.47■□□□□ 0.23
HIF3A-202ENST00000244303 RC3H1Q5TC82 1133 aaKnown RBP16.47■□□□□ 0.23
HIF3A-202ENST00000244303 NT5DC1Q5TFE4 455 aa16.47■□□□□ 0.23
HIF3A-202ENST00000244303 ZNF579Q8NAF0 562 aaKnown RBP16.47■□□□□ 0.23
HIF3A-202ENST00000244303 RNF26Q9BY78 433 aaPredicted RBP16.47■□□□□ 0.23
HIF3A-202ENST00000244303 INTS13Q9NVM9 706 aa16.47■□□□□ 0.23
HIF3A-202ENST00000244303 SCN7AQ01118 1682 aa16.47■□□□□ 0.23
HIF3A-202ENST00000244303 MYH13Q9UKX3 1938 aa16.47■□□□□ 0.23
HIF3A-202ENST00000244303 ZNF827Q17R98 1081 aa16.47■□□□□ 0.23
HIF3A-202ENST00000244303 USP49Q70CQ1 688 aa16.47■□□□□ 0.23
HIF3A-202ENST00000244303 RIOK1Q9BRS2 568 aaKnown RBP16.47■□□□□ 0.23
HIF3A-202ENST00000244303 CSRNP2Q9H175 543 aa16.47■□□□□ 0.23
HIF3A-202ENST00000244303 TMX1Q9H3N1 280 aa16.47■□□□□ 0.23
HIF3A-202ENST00000244303 NARFQ9UHQ1 456 aa16.47■□□□□ 0.23
HIF3A-202ENST00000244303 CEP131Q9UPN4 1083 aa16.47■□□□□ 0.23
HIF3A-202ENST00000244303 CYP2D7A0A087X1C5 515 aa16.46■□□□□ 0.23
HIF3A-202ENST00000244303 FAM205CA6NFA0 338 aa16.46■□□□□ 0.23
HIF3A-202ENST00000244303 SARSP49591 514 aaKnown RBP16.46■□□□□ 0.23
HIF3A-202ENST00000244303 FMR1Q06787 632 aaKnown RBP eCLIP16.46■□□□□ 0.23
HIF3A-202ENST00000244303 UBE4AQ14139 1066 aa16.46■□□□□ 0.23
HIF3A-202ENST00000244303 ELF2Q15723 593 aa16.46■□□□□ 0.23
HIF3A-202ENST00000244303 ENAHQ8N8S7 591 aaPredicted RBP16.46■□□□□ 0.23
HIF3A-202ENST00000244303 SMARCE1Q969G3 411 aa16.46■□□□□ 0.23
HIF3A-202ENST00000244303 VPS54Q9P1Q0 977 aa16.46■□□□□ 0.23
HIF3A-202ENST00000244303 SRP68Q9UHB9 627 aaKnown RBP16.46■□□□□ 0.23
HIF3A-202ENST00000244303 MINPP1Q9UNW1 487 aa16.46■□□□□ 0.23
HIF3A-202ENST00000244303 ACTN4O43707 911 aaKnown RBP16.45■□□□□ 0.22
HIF3A-202ENST00000244303 DYNLL1P63167 89 aaKnown RBP16.45■□□□□ 0.22
HIF3A-202ENST00000244303 AKAP17AQ02040 695 aaKnown RBP16.45■□□□□ 0.22
HIF3A-202ENST00000244303 MORC3Q14149 939 aa16.45■□□□□ 0.22
HIF3A-202ENST00000244303 CELF1Q92879 486 aaKnown RBP16.45■□□□□ 0.22
HIF3A-202ENST00000244303 L2HGDHQ9H9P8 463 aa16.45■□□□□ 0.22
HIF3A-202ENST00000244303 USP21Q9UK80 565 aa16.45■□□□□ 0.22
HIF3A-202ENST00000244303 hCG_1642624A0A1W2PR95 340 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms