RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 TAOK3Q9H2K8 898 aa27.73■■■□□ 2.03
RRP9-201ENST00000232888 RBM28Q9NW13 759 aaKnown RBP27.73■■■□□ 2.03
RRP9-201ENST00000232888 RASA1P20936 1047 aa27.72■■■□□ 2.03
RRP9-201ENST00000232888 MYL10Q9BUA6 226 aa27.72■■■□□ 2.03
RRP9-201ENST00000232888 OSBPL5Q9H0X9 879 aaPredicted RBP27.72■■■□□ 2.03
RRP9-201ENST00000232888 BRCA1P38398 1863 aaKnown RBP27.72■■■□□ 2.03
RRP9-201ENST00000232888 TSPY3P0CV98 308 aa27.71■■■□□ 2.03
RRP9-201ENST00000232888 TSPY8P0CW00 308 aa27.71■■■□□ 2.03
RRP9-201ENST00000232888 SSRP1Q08945 709 aaKnown RBP27.71■■■□□ 2.03
RRP9-201ENST00000232888 C8orf76Q96K31 380 aa27.71■■■□□ 2.03
RRP9-201ENST00000232888 SWAP70Q9UH65 585 aa27.71■■■□□ 2.03
RRP9-201ENST00000232888 MYH1P12882 1939 aa27.71■■■□□ 2.03
RRP9-201ENST00000232888 FMNL1O95466 1100 aaPredicted RBP27.7■■■□□ 2.03
RRP9-201ENST00000232888 RXRAP19793 462 aa27.7■■■□□ 2.03
RRP9-201ENST00000232888 RBM5P52756 815 aaKnown RBP eCLIP27.7■■■□□ 2.03
RRP9-201ENST00000232888 RESTQ13127 1097 aa27.7■■■□□ 2.03
RRP9-201ENST00000232888 PICALMQ13492 652 aa27.7■■■□□ 2.03
RRP9-201ENST00000232888 TRIM22Q8IYM9 498 aa27.7■■■□□ 2.03
RRP9-201ENST00000232888 GMLQ99445 158 aa27.7■■■□□ 2.03
RRP9-201ENST00000232888 MAP3K14Q99558 947 aa27.7■■■□□ 2.03
RRP9-201ENST00000232888 DHX36Q9H2U1 1008 aaKnown RBP27.7■■■□□ 2.03
RRP9-201ENST00000232888 DDX4Q9NQI0 724 aaKnown RBP27.7■■■□□ 2.03
RRP9-201ENST00000232888 PPP1R1BQ9UD71 204 aaPredicted RBP27.7■■■□□ 2.03
RRP9-201ENST00000232888 HDAC9Q9UKV0 1011 aa27.7■■■□□ 2.03
RRP9-201ENST00000232888 LTBP3Q9NS15 1303 aa27.7■■■□□ 2.02
RRP9-201ENST00000232888 HLA-DOAP06340 250 aa27.69■■■□□ 2.02
RRP9-201ENST00000232888 MMP14P50281 582 aa27.69■■■□□ 2.02
RRP9-201ENST00000232888 KRT85P78386 507 aa27.69■■■□□ 2.02
RRP9-201ENST00000232888 GABPAQ06546 454 aa27.69■■■□□ 2.02
RRP9-201ENST00000232888 TROAPQ12815 778 aa27.69■■■□□ 2.02
RRP9-201ENST00000232888 FBXO18Q8NFZ0 1043 aa27.69■■■□□ 2.02
RRP9-201ENST00000232888 NEDD1Q8NHV4 660 aa27.69■■■□□ 2.02
RRP9-201ENST00000232888 NUP133Q8WUM0 1156 aa27.69■■■□□ 2.02
RRP9-201ENST00000232888 DDX49Q9Y6V7 483 aaKnown RBP27.69■■■□□ 2.02
RRP9-201ENST00000232888 PSDA5PKW4 1024 aaPredicted RBP27.69■■■□□ 2.02
RRP9-201ENST00000232888 MBD3O95983 291 aa27.69■■■□□ 2.02
RRP9-201ENST00000232888 SLC4A8Q2Y0W8 1093 aa27.69■■■□□ 2.02
RRP9-201ENST00000232888 ATL3Q6DD88 541 aa27.69■■■□□ 2.02
RRP9-201ENST00000232888 CCDC144CPQ8IYA2 1237 aa27.69■■■□□ 2.02
RRP9-201ENST00000232888 AGBL3Q8NEM8 1001 aa27.69■■■□□ 2.02
RRP9-201ENST00000232888 EHD4Q9H223 541 aa27.69■■■□□ 2.02
RRP9-201ENST00000232888 PSMD14O00487 310 aa27.68■■■□□ 2.02
RRP9-201ENST00000232888 NCLP19338 710 aaKnown RBP27.68■■■□□ 2.02
RRP9-201ENST00000232888 RCSD1Q6JBY9 416 aa27.68■■■□□ 2.02
RRP9-201ENST00000232888 FERMT3Q86UX7 667 aa27.68■■■□□ 2.02
RRP9-201ENST00000232888 DNM1Q05193 864 aaKnown RBP27.67■■■□□ 2.02
RRP9-201ENST00000232888 CRACR2BQ8N4Y2 399 aaPredicted RBP27.67■■■□□ 2.02
RRP9-201ENST00000232888 JDP2Q8WYK2 163 aa27.67■■■□□ 2.02
RRP9-201ENST00000232888 KAT14Q9H8E8 782 aa27.67■■■□□ 2.02
RRP9-201ENST00000232888 IL17RBQ9NRM6 502 aa27.67■■■□□ 2.02
RRP9-201ENST00000232888 SERPINB13Q9UIV8 391 aa27.67■■■□□ 2.02
RRP9-201ENST00000232888 FER1L6Q2WGJ9 1857 aa27.67■■■□□ 2.02
RRP9-201ENST00000232888 RAD17O75943 681 aa27.66■■■□□ 2.02
RRP9-201ENST00000232888 CFAP100Q494V2 611 aa27.66■■■□□ 2.02
RRP9-201ENST00000232888 ECM29Q5VYK3 1845 aa27.66■■■□□ 2.02
RRP9-201ENST00000232888 USP48Q86UV5 1035 aa27.66■■■□□ 2.02
RRP9-201ENST00000232888 OGFOD1Q8N543 542 aa27.66■■■□□ 2.02
RRP9-201ENST00000232888 SLC44A5Q8NCS7 719 aa27.66■■■□□ 2.02
RRP9-201ENST00000232888 CHAMP1Q96JM3 812 aa27.66■■■□□ 2.02
RRP9-201ENST00000232888 ALG1Q9BT22 464 aa27.66■■■□□ 2.02
RRP9-201ENST00000232888 SCAND2PQ9GZW5 306 aaPredicted RBP27.66■■■□□ 2.02
RRP9-201ENST00000232888 CNPY2Q9Y2B0 182 aa27.66■■■□□ 2.02
RRP9-201ENST00000232888 PLIN4Q96Q06 1357 aa27.65■■■□□ 2.02
RRP9-201ENST00000232888 NMT2O60551 498 aa27.65■■■□□ 2.02
RRP9-201ENST00000232888 GSE1Q14687 1217 aa27.65■■■□□ 2.02
RRP9-201ENST00000232888 FOXD4L6Q3SYB3 417 aaPredicted RBP27.65■■■□□ 2.02
RRP9-201ENST00000232888 FOXD4L3Q6VB84 417 aaPredicted RBP27.65■■■□□ 2.02
RRP9-201ENST00000232888 CTCFLQ8NI51 663 aaPredicted RBP27.65■■■□□ 2.02
RRP9-201ENST00000232888 RNF26Q9BY78 433 aaPredicted RBP27.65■■■□□ 2.02
RRP9-201ENST00000232888 ENTPD3O75355 529 aa27.65■■■□□ 2.02
RRP9-201ENST00000232888 KIF5BP33176 963 aa27.65■■■□□ 2.02
RRP9-201ENST00000232888 NBPF11Q86T75 865 aa27.65■■■□□ 2.02
RRP9-201ENST00000232888 PHKBQ93100 1093 aa27.65■■■□□ 2.02
RRP9-201ENST00000232888 SLC26A6Q9BXS9 759 aa27.65■■■□□ 2.02
RRP9-201ENST00000232888 BCS1LQ9Y276 419 aa27.65■■■□□ 2.02
RRP9-201ENST00000232888 COL4A5P29400 1685 aa27.64■■■□□ 2.02
RRP9-201ENST00000232888 ADAMTSL1Q8N6G6 1762 aa27.64■■■□□ 2.01
RRP9-201ENST00000232888 DEXIO95424 95 aa27.64■■■□□ 2.01
RRP9-201ENST00000232888 NOVP48745 357 aa27.64■■■□□ 2.01
RRP9-201ENST00000232888 KLHL34Q8N239 644 aa27.64■■■□□ 2.01
RRP9-201ENST00000232888 CFAP45Q9UL16 551 aa27.64■■■□□ 2.01
RRP9-201ENST00000232888 COL2A1P02458 1487 aaPredicted RBP27.63■■■□□ 2.01
RRP9-201ENST00000232888 ELP1O95163 1332 aa27.63■■■□□ 2.01
RRP9-201ENST00000232888 NFKBIEO00221 500 aa27.63■■■□□ 2.01
RRP9-201ENST00000232888 NFIAQ12857 509 aa27.63■■■□□ 2.01
RRP9-201ENST00000232888 TRIM29Q14134 588 aa27.63■■■□□ 2.01
RRP9-201ENST00000232888 TNIP1Q15025 636 aa27.63■■■□□ 2.01
RRP9-201ENST00000232888 BRAPQ7Z569 592 aa27.63■■■□□ 2.01
RRP9-201ENST00000232888 MTMR14Q8NCE2 650 aa27.63■■■□□ 2.01
RRP9-201ENST00000232888 SPON1Q9HCB6 807 aa27.63■■■□□ 2.01
RRP9-201ENST00000232888 PPFIA3O75145 1194 aa27.62■■■□□ 2.01
RRP9-201ENST00000232888 PPP4R3BQ5MIZ7 849 aa27.62■■■□□ 2.01
RRP9-201ENST00000232888 TMOD2Q9NZR1 351 aa27.62■■■□□ 2.01
RRP9-201ENST00000232888 PI4KBQ9UBF8 816 aa27.62■■■□□ 2.01
RRP9-201ENST00000232888 FAM198AQ9UFP1 575 aa27.62■■■□□ 2.01
RRP9-201ENST00000232888 GNAQP50148 359 aa27.61■■■□□ 2.01
RRP9-201ENST00000232888 AKAP17AQ02040 695 aaKnown RBP27.61■■■□□ 2.01
RRP9-201ENST00000232888 CXCL9Q07325 125 aa27.61■■■□□ 2.01
RRP9-201ENST00000232888 CIAPIN1Q6FI81 312 aa27.61■■■□□ 2.01
RRP9-201ENST00000232888 TMTC3Q6ZXV5 915 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms