RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 PAPOLAP51003 745 aaKnown RBP6.44□□□□□ -1.38
RFX4-201ENST00000229387 PDE1AP54750 535 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 USP4Q13107 963 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 TSR1Q2NL82 804 aaKnown RBP6.44□□□□□ -1.38
RFX4-201ENST00000229387 LRRC23Q53EV4 343 aaPredicted RBP6.44□□□□□ -1.38
RFX4-201ENST00000229387 TMEM164Q5U3C3 297 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 KRT28Q7Z3Y7 464 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 RPAP2Q8IXW5 612 aaPredicted RBP6.44□□□□□ -1.38
RFX4-201ENST00000229387 RBM46Q8TBY0 533 aaKnown RBP6.44□□□□□ -1.38
RFX4-201ENST00000229387 BHMTQ93088 406 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 RSRC1Q96IZ7 334 aaKnown RBP6.44□□□□□ -1.38
RFX4-201ENST00000229387 FAM81BQ96LP2 452 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 BIN2Q9UBW5 565 aaPredicted RBP6.44□□□□□ -1.38
RFX4-201ENST00000229387 PTCH1Q13635 1447 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 USP27XA6NNY8 438 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 GOLGA6L19H0YKK7 550 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 RNF8O76064 485 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 CPA1P15085 419 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 EIF4BP23588 611 aaKnown RBP6.44□□□□□ -1.38
RFX4-201ENST00000229387 NAA25Q14CX7 972 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 KBTBD12Q3ZCT8 623 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 CAPRIN2Q6IMN6 1127 aaKnown RBP6.44□□□□□ -1.38
RFX4-201ENST00000229387 HDXQ7Z353 690 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 FAM114A1Q8IWE2 563 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 SMYD1Q8NB12 490 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 CNNM3Q8NE01 707 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 SLC35B4Q969S0 331 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 EVI5LQ96CN4 794 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 CDHR5Q9HBB8 845 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 GPCPD1Q9NPB8 672 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 DNAAF2Q9NVR5 837 aaKnown RBP6.44□□□□□ -1.38
RFX4-201ENST00000229387 ANKIB1Q9P2G1 1089 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 PALD1Q9ULE6 856 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 NDUFB9Q9Y6M9 179 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 RGS12O14924 1447 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 TECPR2O15040 1411 aa6.44□□□□□ -1.38
RFX4-201ENST00000229387 NPHP1O15259 732 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 ST18O60284 1047 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 HMMRO75330 724 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 CCDC192P0DO97 292 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 STIP1P31948 543 aaKnown RBP6.43□□□□□ -1.38
RFX4-201ENST00000229387 USP5P45974 858 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 NEK4P51957 841 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 MPP3Q13368 585 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 LONRF2Q1L5Z9 754 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 LRRFIP1Q32MZ4 808 aaKnown RBP6.43□□□□□ -1.38
RFX4-201ENST00000229387 C1orf141Q5JVX7 400 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 AKNAD1Q5T1N1 836 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 RABGGTAQ92696 567 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 GORASP1Q9BQQ3 440 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 RETREG1Q9H6L5 497 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 SLAIN2Q9P270 581 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 DNAI1Q9UI46 699 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 G3BP2Q9UN86 482 aaKnown RBP6.43□□□□□ -1.38
RFX4-201ENST00000229387 TIMM44O43615 452 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 ZEB2O60315 1214 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 SMNDC1O75940 238 aaKnown RBP eCLIP6.43□□□□□ -1.38
RFX4-201ENST00000229387 HOXA10P31260 410 aaPredicted RBP6.43□□□□□ -1.38
RFX4-201ENST00000229387 MAGEA10P43363 369 aaPredicted RBP6.43□□□□□ -1.38
RFX4-201ENST00000229387 UBE2HP62256 183 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 SNW1Q13573 536 aaKnown RBP6.43□□□□□ -1.38
RFX4-201ENST00000229387 DHX8Q14562 1220 aaKnown RBP6.43□□□□□ -1.38
RFX4-201ENST00000229387 SLC4A8Q2Y0W8 1093 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 CEP85LQ5SZL2 805 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 THEMIS2Q5TEJ8 643 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 RSRC2Q7L4I2 434 aaKnown RBP6.43□□□□□ -1.38
RFX4-201ENST00000229387 USP48Q86UV5 1035 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 LRRN4CLQ8ND94 238 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 NUP133Q8WUM0 1156 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 UPF1Q92900 1129 aaKnown RBP eCLIP6.43□□□□□ -1.38
RFX4-201ENST00000229387 CUL5Q93034 780 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 PAGR1Q9BTK6 254 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 LRRCC1Q9C099 1032 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 IRF2BPLQ9H1B7 796 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 RTEL1Q9NZ71 1219 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 GABBR1Q9UBS5 961 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 ZNF510Q9Y2H8 683 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 CAPN7Q9Y6W3 813 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 GPR37L1O60883 481 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 PARNO95453 639 aaKnown RBP6.43□□□□□ -1.38
RFX4-201ENST00000229387 ARHGAP25P42331 645 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 CCT4P50991 539 aaKnown RBP6.43□□□□□ -1.38
RFX4-201ENST00000229387 PTGDRQ13258 359 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 CCDC57Q2TAC2 916 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 GJC2Q5T442 439 aaPredicted RBP6.43□□□□□ -1.38
RFX4-201ENST00000229387 IP6K1Q92551 441 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 SRCIN1Q9C0H9 1055 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 TMEM165Q9HC07 324 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 HMX1Q9NP08 348 aaPredicted RBP6.43□□□□□ -1.38
RFX4-201ENST00000229387 C9orf78Q9NZ63 289 aaPredicted RBP6.43□□□□□ -1.38
RFX4-201ENST00000229387 SPG7Q9UQ90 795 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 MAP3K2Q9Y2U5 619 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.43□□□□□ -1.38
RFX4-201ENST00000229387 ATP10DQ9P241 1426 aa6.43□□□□□ -1.38
RFX4-201ENST00000229387 USP31Q70CQ4 1352 aa6.42□□□□□ -1.38
RFX4-201ENST00000229387 ENO4A6NNW6 628 aa6.42□□□□□ -1.38
RFX4-201ENST00000229387 GADD45BO75293 160 aaPredicted RBP6.42□□□□□ -1.38
RFX4-201ENST00000229387 EIF4A1P60842 406 aaKnown RBP6.42□□□□□ -1.38
RFX4-201ENST00000229387 TUBB4BP68371 445 aa6.42□□□□□ -1.38
RFX4-201ENST00000229387 SLC7A5Q01650 507 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms