RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 LRP6O75581 1613 aa16.77■□□□□ 0.28
CNOT3-201ENST00000221232 TOP1P11387 765 aaKnown RBP16.77■□□□□ 0.27
CNOT3-201ENST00000221232 IFIT1BQ5T764 474 aaKnown RBP16.77■□□□□ 0.27
CNOT3-201ENST00000221232 CCDC150Q8NCX0 1101 aa16.77■□□□□ 0.27
CNOT3-201ENST00000221232 AATFQ9NY61 560 aaKnown RBP eCLIP16.77■□□□□ 0.27
CNOT3-201ENST00000221232 CCDC196A0A1B0GTZ2 297 aa16.76■□□□□ 0.27
CNOT3-201ENST00000221232 IKBKBO14920 756 aa16.76■□□□□ 0.27
CNOT3-201ENST00000221232 ELF2Q15723 593 aa16.76■□□□□ 0.27
CNOT3-201ENST00000221232 CAVIN4Q5BKX8 364 aa16.76■□□□□ 0.27
CNOT3-201ENST00000221232 PNPLA7Q6ZV29 1317 aa16.76■□□□□ 0.27
CNOT3-201ENST00000221232 NUP98P52948 1817 aa16.76■□□□□ 0.27
CNOT3-201ENST00000221232 PTPREP23469 700 aa16.76■□□□□ 0.27
CNOT3-201ENST00000221232 MDM2Q00987 491 aaPredicted RBP16.76■□□□□ 0.27
CNOT3-201ENST00000221232 RILPL1Q5EBL4 403 aa16.76■□□□□ 0.27
CNOT3-201ENST00000221232 ZNF384Q8TF68 577 aa16.76■□□□□ 0.27
CNOT3-201ENST00000221232 AK7Q96M32 723 aa16.76■□□□□ 0.27
CNOT3-201ENST00000221232 SAMSN1Q9NSI8 373 aaKnown RBP16.76■□□□□ 0.27
CNOT3-201ENST00000221232 GNL3LQ9NVN8 582 aaKnown RBP16.76■□□□□ 0.27
CNOT3-201ENST00000221232 MINPP1Q9UNW1 487 aa16.76■□□□□ 0.27
CNOT3-201ENST00000221232 NFE2L3Q9Y4A8 694 aa16.76■□□□□ 0.27
CNOT3-201ENST00000221232 CYP2D6P10635 497 aa16.75■□□□□ 0.27
CNOT3-201ENST00000221232 VEGFAP15692 232 aaPredicted RBP16.75■□□□□ 0.27
CNOT3-201ENST00000221232 ADKP55263 362 aaKnown RBP16.75■□□□□ 0.27
CNOT3-201ENST00000221232 CREBRFQ8IUR6 639 aa16.75■□□□□ 0.27
CNOT3-201ENST00000221232 SMYD4Q8IYR2 804 aaPredicted RBP16.75■□□□□ 0.27
CNOT3-201ENST00000221232 SMARCE1Q969G3 411 aa16.75■□□□□ 0.27
CNOT3-201ENST00000221232 FAM84BQ96KN1 310 aaPredicted RBP16.75■□□□□ 0.27
CNOT3-201ENST00000221232 ZSCAN10Q96SZ4 725 aaPredicted RBP16.75■□□□□ 0.27
CNOT3-201ENST00000221232 DNAI1Q9UI46 699 aa16.75■□□□□ 0.27
CNOT3-201ENST00000221232 MYH7P12883 1935 aa16.75■□□□□ 0.27
CNOT3-201ENST00000221232 FAM182BQ5T319 152 aa16.75■□□□□ 0.27
CNOT3-201ENST00000221232 TMTC2Q8N394 836 aa16.75■□□□□ 0.27
CNOT3-201ENST00000221232 FOXP1Q9H334 677 aaPredicted RBP16.75■□□□□ 0.27
CNOT3-201ENST00000221232 C4AP0C0L4 1744 aa16.75■□□□□ 0.27
CNOT3-201ENST00000221232 C4BP0C0L5 1744 aa16.75■□□□□ 0.27
CNOT3-201ENST00000221232 STK36Q9NRP7 1315 aa16.75■□□□□ 0.27
CNOT3-201ENST00000221232 SEC23AQ15436 765 aa16.75■□□□□ 0.27
CNOT3-201ENST00000221232 RIOK1Q9BRS2 568 aaKnown RBP16.75■□□□□ 0.27
CNOT3-201ENST00000221232 INTS13Q9NVM9 706 aa16.75■□□□□ 0.27
CNOT3-201ENST00000221232 SRP68Q9UHB9 627 aaKnown RBP16.75■□□□□ 0.27
CNOT3-201ENST00000221232 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.74■□□□□ 0.27
CNOT3-201ENST00000221232 BAZ2BQ9UIF8 2168 aaKnown RBP16.74■□□□□ 0.27
CNOT3-201ENST00000221232 A0A087X0B3 334 aa16.74■□□□□ 0.27
CNOT3-201ENST00000221232 NRDCO43847 1150 aa16.74■□□□□ 0.27
CNOT3-201ENST00000221232 PKN1Q16512 942 aa16.74■□□□□ 0.27
CNOT3-201ENST00000221232 CATIPQ7Z7H3 387 aa16.74■□□□□ 0.27
CNOT3-201ENST00000221232 SPATA31A1Q5TZJ5 1347 aa16.74■□□□□ 0.27
CNOT3-201ENST00000221232 TBC1D9BQ66K14 1250 aa16.74■□□□□ 0.27
CNOT3-201ENST00000221232 CPLX3Q8WVH0 158 aa16.74■□□□□ 0.27
CNOT3-201ENST00000221232 COL4A1P02462 1669 aa16.73■□□□□ 0.27
CNOT3-201ENST00000221232 ADAMTS3O15072 1205 aa16.73■□□□□ 0.27
CNOT3-201ENST00000221232 CTR9Q6PD62 1173 aa16.73■□□□□ 0.27
CNOT3-201ENST00000221232 LINC00116Q8NCU8 138 aa16.73■□□□□ 0.27
CNOT3-201ENST00000221232 TRIM75PA6NK02 468 aa16.73■□□□□ 0.27
CNOT3-201ENST00000221232 PRDX5P30044 214 aa16.73■□□□□ 0.27
CNOT3-201ENST00000221232 FAM98CQ17RN3 349 aaKnown RBP16.73■□□□□ 0.27
CNOT3-201ENST00000221232 HOOK1Q9UJC3 728 aaKnown RBP16.73■□□□□ 0.27
CNOT3-201ENST00000221232 ZNF652Q9Y2D9 606 aa16.73■□□□□ 0.27
CNOT3-201ENST00000221232 ABCA3Q99758 1704 aa16.73■□□□□ 0.27
CNOT3-201ENST00000221232 CBFA2T2O43439 604 aa16.72■□□□□ 0.27
CNOT3-201ENST00000221232 ERCC6LQ2NKX8 1250 aa16.72■□□□□ 0.27
CNOT3-201ENST00000221232 IQCA1Q86XH1 822 aa16.72■□□□□ 0.27
CNOT3-201ENST00000221232 VSTM4Q8IW00 320 aa16.72■□□□□ 0.27
CNOT3-201ENST00000221232 MED15Q96RN5 788 aa16.72■□□□□ 0.27
CNOT3-201ENST00000221232 SRPRBQ9Y5M8 271 aaKnown RBP16.72■□□□□ 0.27
CNOT3-201ENST00000221232 FAM237AA0A1B0GTK4 181 aa16.72■□□□□ 0.27
CNOT3-201ENST00000221232 VWA3AA6NCI4 1184 aa16.72■□□□□ 0.27
CNOT3-201ENST00000221232 PIP4K2BP78356 416 aa16.72■□□□□ 0.27
CNOT3-201ENST00000221232 MECOMQ03112 1051 aa16.72■□□□□ 0.27
CNOT3-201ENST00000221232 SLU7O95391 586 aaKnown RBP16.71■□□□□ 0.27
CNOT3-201ENST00000221232 CDC25AP30304 524 aa16.71■□□□□ 0.27
CNOT3-201ENST00000221232 KRT2P35908 639 aa16.71■□□□□ 0.27
CNOT3-201ENST00000221232 TXNRD3Q86VQ6 643 aa16.71■□□□□ 0.27
CNOT3-201ENST00000221232 KMT5BQ4FZB7 885 aa16.71■□□□□ 0.27
CNOT3-201ENST00000221232 SYMPKQ92797 1274 aaKnown RBP16.71■□□□□ 0.27
CNOT3-201ENST00000221232 BLZF1Q9H2G9 400 aa16.71■□□□□ 0.27
CNOT3-201ENST00000221232 MYH3P11055 1940 aa16.71■□□□□ 0.27
CNOT3-201ENST00000221232 ACTN4O43707 911 aaKnown RBP16.71■□□□□ 0.26
CNOT3-201ENST00000221232 XBP1P17861 261 aa16.71■□□□□ 0.26
CNOT3-201ENST00000221232 ZHX1Q9UKY1 873 aaPredicted RBP16.71■□□□□ 0.26
CNOT3-201ENST00000221232 STRCQ7RTU9 1775 aa16.71■□□□□ 0.26
CNOT3-201ENST00000221232 URI1O94763 535 aaPredicted RBP16.7■□□□□ 0.26
CNOT3-201ENST00000221232 SRBD1Q8N5C6 995 aaKnown RBP16.7■□□□□ 0.26
CNOT3-201ENST00000221232 RNF26Q9BY78 433 aaPredicted RBP16.7■□□□□ 0.26
CNOT3-201ENST00000221232 BSDC1Q9NW68 430 aaPredicted RBP16.7■□□□□ 0.26
CNOT3-201ENST00000221232 COL1A1P02452 1464 aaPredicted RBP16.7■□□□□ 0.26
CNOT3-201ENST00000221232 MCM7P33993 719 aa16.7■□□□□ 0.26
CNOT3-201ENST00000221232 UBE4AQ14139 1066 aa16.7■□□□□ 0.26
CNOT3-201ENST00000221232 PIK3AP1Q6ZUJ8 805 aa16.7■□□□□ 0.26
CNOT3-201ENST00000221232 DESI2Q9BSY9 194 aa16.7■□□□□ 0.26
CNOT3-201ENST00000221232 CEP131Q9UPN4 1083 aa16.7■□□□□ 0.26
CNOT3-201ENST00000221232 TROAPQ12815 778 aa16.69■□□□□ 0.26
CNOT3-201ENST00000221232 TEX33O43247 280 aa16.69■□□□□ 0.26
CNOT3-201ENST00000221232 CD44P16070 742 aaKnown RBP16.69■□□□□ 0.26
CNOT3-201ENST00000221232 NLRP5P59047 1200 aa16.69■□□□□ 0.26
CNOT3-201ENST00000221232 RPS8P62241 208 aaKnown RBP16.69■□□□□ 0.26
CNOT3-201ENST00000221232 PTGDRQ13258 359 aa16.69■□□□□ 0.26
CNOT3-201ENST00000221232 MORC3Q14149 939 aa16.69■□□□□ 0.26
CNOT3-201ENST00000221232 FBXO38Q6PIJ6 1188 aa16.69■□□□□ 0.26
CNOT3-201ENST00000221232 CGNQ9P2M7 1197 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms