RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 DPEP1P16444 411 aa15.51■□□□□ 0.07
SIX4-201ENST00000216513 KIF4BQ2VIQ3 1234 aa15.51■□□□□ 0.07
SIX4-201ENST00000216513 RAET1EQ8TD07 263 aa15.51■□□□□ 0.07
SIX4-201ENST00000216513 TDRD3Q9H7E2 651 aaKnown RBP15.51■□□□□ 0.07
SIX4-201ENST00000216513 ADCY5O95622 1261 aa15.51■□□□□ 0.07
SIX4-201ENST00000216513 TMX3Q96JJ7 454 aa15.51■□□□□ 0.07
SIX4-201ENST00000216513 TMEM87BQ96K49 555 aa15.51■□□□□ 0.07
SIX4-201ENST00000216513 FERMT1Q9BQL6 677 aa15.51■□□□□ 0.07
SIX4-201ENST00000216513 STK25O00506 426 aa15.51■□□□□ 0.07
SIX4-201ENST00000216513 FBXO11Q86XK2 927 aa15.51■□□□□ 0.07
SIX4-201ENST00000216513 ZHX2Q9Y6X8 837 aa15.51■□□□□ 0.07
SIX4-201ENST00000216513 VWA3AA6NCI4 1184 aa15.51■□□□□ 0.07
SIX4-201ENST00000216513 PDE6AP16499 860 aa15.51■□□□□ 0.07
SIX4-201ENST00000216513 DYNLL1P63167 89 aaKnown RBP15.51■□□□□ 0.07
SIX4-201ENST00000216513 FTOQ9C0B1 505 aaKnown RBP eCLIP15.51■□□□□ 0.07
SIX4-201ENST00000216513 SPATA31A5Q5VU36 1347 aa15.5■□□□□ 0.07
SIX4-201ENST00000216513 SPATA31A7Q8IWB4 1347 aa15.5■□□□□ 0.07
SIX4-201ENST00000216513 MYOM2P54296 1465 aa15.5■□□□□ 0.07
SIX4-201ENST00000216513 ZBTB7BO15156 539 aaPredicted RBP15.5■□□□□ 0.07
SIX4-201ENST00000216513 KRT19P08727 400 aa15.5■□□□□ 0.07
SIX4-201ENST00000216513 TRPC3Q13507 836 aa15.5■□□□□ 0.07
SIX4-201ENST00000216513 CCDC183Q5T5S1 534 aa15.5■□□□□ 0.07
SIX4-201ENST00000216513 MARCH10Q8NA82 808 aaPredicted RBP15.5■□□□□ 0.07
SIX4-201ENST00000216513 NOP2P46087 812 aaKnown RBP15.5■□□□□ 0.07
SIX4-201ENST00000216513 PRPF4BQ13523 1007 aaKnown RBP15.5■□□□□ 0.07
SIX4-201ENST00000216513 CCDC125Q86Z20 511 aa15.5■□□□□ 0.07
SIX4-201ENST00000216513 APOBEC3FQ8IUX4 373 aaKnown RBP15.5■□□□□ 0.07
SIX4-201ENST00000216513 PRDM5Q9NQX1 630 aaPredicted RBP15.5■□□□□ 0.07
SIX4-201ENST00000216513 ZNF341Q9BYN7 854 aa15.5■□□□□ 0.07
SIX4-201ENST00000216513 UBXN2AP68543 259 aa15.5■□□□□ 0.07
SIX4-201ENST00000216513 POLA2Q14181 598 aa15.5■□□□□ 0.07
SIX4-201ENST00000216513 SMC1AQ14683 1233 aaKnown RBP15.5■□□□□ 0.07
SIX4-201ENST00000216513 BEND3Q5T5X7 828 aa15.5■□□□□ 0.07
SIX4-201ENST00000216513 MICAL1Q8TDZ2 1067 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 SPAG5Q96R06 1193 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 ZBTB40Q9NUA8 1239 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 ADGRB3O60242 1522 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 TOP1P11387 765 aaKnown RBP15.49■□□□□ 0.07
SIX4-201ENST00000216513 PTGS1P23219 599 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 MIER3Q7Z3K6 550 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 MICALL2Q8IY33 904 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 POTEB2H3BUK9 544 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 GAS7O60861 476 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 CRKP46108 304 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 SLC8A3P57103 927 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 ARID5AQ03989 594 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 KCTD1Q719H9 257 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 TPH2Q8IWU9 490 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 ZSCAN16Q9H4T2 348 aaPredicted RBP15.49■□□□□ 0.07
SIX4-201ENST00000216513 TMCO5BA8MYB1 307 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 ABL1P00519 1130 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 GBP2P32456 591 aaPredicted RBP15.49■□□□□ 0.07
SIX4-201ENST00000216513 DNM1Q05193 864 aaKnown RBP15.49■□□□□ 0.07
SIX4-201ENST00000216513 SESTD1Q86VW0 696 aa15.49■□□□□ 0.07
SIX4-201ENST00000216513 CHMLP26374 656 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 ARID4AP29374 1257 aaPredicted RBP15.48■□□□□ 0.07
SIX4-201ENST00000216513 CASQ1P31415 396 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 BIRC2Q13490 618 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 HAUS3Q68CZ6 603 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 ZBBXA8MT70 800 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 CYP19A1P11511 503 aaPredicted RBP15.48■□□□□ 0.07
SIX4-201ENST00000216513 APOL6Q9BWW8 343 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 MYL3P08590 195 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 RAD51AP2Q09MP3 1159 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 GRIPAP1Q4V328 841 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 CEP135Q66GS9 1140 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 RSPH3Q86UC2 560 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 IFNL3Q8IZI9 196 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 BRIP1Q9BX63 1249 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 SYNMO15061 1565 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 YY1P25490 414 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 LEKR1Q6ZMV7 388 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 BSDC1Q9NW68 430 aaPredicted RBP15.48■□□□□ 0.07
SIX4-201ENST00000216513 CELF2O95319 508 aaKnown RBP15.48■□□□□ 0.07
SIX4-201ENST00000216513 DCAF17Q5H9S7 520 aaPredicted RBP15.48■□□□□ 0.07
SIX4-201ENST00000216513 LZTS2Q9BRK4 669 aa15.48■□□□□ 0.07
SIX4-201ENST00000216513 DEXIO95424 95 aa15.47■□□□□ 0.07
SIX4-201ENST00000216513 ZSCAN23Q3MJ62 389 aa15.47■□□□□ 0.07
SIX4-201ENST00000216513 ARHGAP31Q2M1Z3 1444 aa15.47■□□□□ 0.07
SIX4-201ENST00000216513 RUFY3Q7L099 469 aa15.47■□□□□ 0.07
SIX4-201ENST00000216513 SSX2IPQ9Y2D8 614 aa15.47■□□□□ 0.07
SIX4-201ENST00000216513 CMTR1Q8N1G2 835 aaKnown RBP15.47■□□□□ 0.07
SIX4-201ENST00000216513 PSTPIP2Q9H939 334 aa15.47■□□□□ 0.07
SIX4-201ENST00000216513 PI4KBQ9UBF8 816 aa15.47■□□□□ 0.07
SIX4-201ENST00000216513 CNOT7Q9UIV1 285 aaKnown RBP15.47■□□□□ 0.07
SIX4-201ENST00000216513 MYO3BQ8WXR4 1341 aa15.47■□□□□ 0.07
SIX4-201ENST00000216513 GOLGA6L10A6NI86 522 aa15.47■□□□□ 0.07
SIX4-201ENST00000216513 PLEKHM2Q8IWE5 1019 aa15.47■□□□□ 0.07
SIX4-201ENST00000216513 OTUD6BQ8N6M0 293 aa15.47■□□□□ 0.07
SIX4-201ENST00000216513 RTEL1Q9NZ71 1219 aa15.47■□□□□ 0.07
SIX4-201ENST00000216513 NONOQ15233 471 aaKnown RBP eCLIP15.47■□□□□ 0.07
SIX4-201ENST00000216513 YEATS4O95619 227 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 KRT5P13647 590 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 SFPQP23246 707 aaKnown RBP eCLIP15.46■□□□□ 0.07
SIX4-201ENST00000216513 C9orf131Q5VYM1 1079 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 SV2BQ7L1I2 683 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 ADD3Q9UEY8 706 aaKnown RBP15.46■□□□□ 0.07
SIX4-201ENST00000216513 SWAP70Q9UH65 585 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 STX17P56962 302 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 PTPN14Q15678 1187 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms