RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 GJA8P48165 433 aa18.27■□□□□ 0.52
UPK3A-201ENST00000216211 BACE1P56817 501 aa18.27■□□□□ 0.52
UPK3A-201ENST00000216211 NKX2-3Q8TAU0 364 aa18.27■□□□□ 0.52
UPK3A-201ENST00000216211 RHPN1Q8TCX5 695 aa18.27■□□□□ 0.52
UPK3A-201ENST00000216211 COA7Q96BR5 231 aa18.27■□□□□ 0.52
UPK3A-201ENST00000216211 UNC93B1Q9H1C4 597 aa18.27■□□□□ 0.52
UPK3A-201ENST00000216211 TAOK2Q9UL54 1235 aa18.27■□□□□ 0.52
UPK3A-201ENST00000216211 GJB1P08034 283 aa18.26■□□□□ 0.51
UPK3A-201ENST00000216211 MS4A1P11836 297 aa18.26■□□□□ 0.51
UPK3A-201ENST00000216211 GCLCP48506 637 aaPredicted RBP18.26■□□□□ 0.51
UPK3A-201ENST00000216211 MAP3K12Q12852 859 aa18.26■□□□□ 0.51
UPK3A-201ENST00000216211 IRF5Q13568 498 aa18.26■□□□□ 0.51
UPK3A-201ENST00000216211 HSP90AB4PQ58FF6 505 aa18.26■□□□□ 0.51
UPK3A-201ENST00000216211 TMOD4Q9NZQ9 345 aa18.26■□□□□ 0.51
UPK3A-201ENST00000216211 ZBTB21Q9ULJ3 1066 aa18.26■□□□□ 0.51
UPK3A-201ENST00000216211 COG6Q9Y2V7 657 aa18.26■□□□□ 0.51
UPK3A-201ENST00000216211 INHAP05111 366 aa18.25■□□□□ 0.51
UPK3A-201ENST00000216211 HABP4Q5JVS0 413 aaKnown RBP18.25■□□□□ 0.51
UPK3A-201ENST00000216211 PXYLP1Q8TE99 480 aa18.25■□□□□ 0.51
UPK3A-201ENST00000216211 BCL11AQ9H165 835 aa18.25■□□□□ 0.51
UPK3A-201ENST00000216211 MYH8P13535 1937 aa18.25■□□□□ 0.51
UPK3A-201ENST00000216211 MYH7P12883 1935 aa18.24■□□□□ 0.51
UPK3A-201ENST00000216211 C19orf81C9J6K1 198 aa18.24■□□□□ 0.51
UPK3A-201ENST00000216211 USP17L10C9JJH3 530 aa18.24■□□□□ 0.51
UPK3A-201ENST00000216211 IRX3P78415 501 aaPredicted RBP18.24■□□□□ 0.51
UPK3A-201ENST00000216211 CERS3Q8IU89 383 aa18.24■□□□□ 0.51
UPK3A-201ENST00000216211 RPAP2Q8IXW5 612 aaPredicted RBP18.24■□□□□ 0.51
UPK3A-201ENST00000216211 U2AF1L4Q8WU68 220 aaKnown RBP18.24■□□□□ 0.51
UPK3A-201ENST00000216211 GINM1Q9NU53 330 aa18.24■□□□□ 0.51
UPK3A-201ENST00000216211 DDX19BQ9UMR2 479 aa18.24■□□□□ 0.51
UPK3A-201ENST00000216211 HOXA7P31268 230 aaPredicted RBP18.23■□□□□ 0.51
UPK3A-201ENST00000216211 SIRT2Q8IXJ6 389 aa18.23■□□□□ 0.51
UPK3A-201ENST00000216211 CLASRPQ8N2M8 674 aaKnown RBP18.23■□□□□ 0.51
UPK3A-201ENST00000216211 KIF1BPQ96EK5 621 aa18.23■□□□□ 0.51
UPK3A-201ENST00000216211 P2RX7Q99572 595 aaKnown RBP18.23■□□□□ 0.51
UPK3A-201ENST00000216211 RIOK1Q9BRS2 568 aaKnown RBP18.23■□□□□ 0.51
UPK3A-201ENST00000216211 CEP290O15078 2479 aa18.23■□□□□ 0.51
UPK3A-201ENST00000216211 PEX10O60683 326 aa18.22■□□□□ 0.51
UPK3A-201ENST00000216211 SGPL1O95470 568 aa18.22■□□□□ 0.51
UPK3A-201ENST00000216211 GH2P01242 217 aa18.22■□□□□ 0.51
UPK3A-201ENST00000216211 TTF1Q15361 905 aaPredicted RBP18.22■□□□□ 0.51
UPK3A-201ENST00000216211 TATDN1Q6P1N9 297 aa18.22■□□□□ 0.51
UPK3A-201ENST00000216211 TMED8Q6PL24 325 aaPredicted RBP18.22■□□□□ 0.51
UPK3A-201ENST00000216211 DPF3Q92784 378 aa18.22■□□□□ 0.51
UPK3A-201ENST00000216211 DNAJC2Q99543 621 aaKnown RBP18.22■□□□□ 0.51
UPK3A-201ENST00000216211 ZBTB40Q9NUA8 1239 aa18.22■□□□□ 0.51
UPK3A-201ENST00000216211 MORF4L1Q9UBU8 362 aa18.22■□□□□ 0.51
UPK3A-201ENST00000216211 SERPINB13Q9UIV8 391 aa18.22■□□□□ 0.51
UPK3A-201ENST00000216211 BAZ2AQ9UIF9 1905 aaKnown RBP18.21■□□□□ 0.51
UPK3A-201ENST00000216211 MAGEB6P1A0A0J9YX57 407 aa18.21■□□□□ 0.51
UPK3A-201ENST00000216211 H0YGN5 161 aa18.21■□□□□ 0.51
UPK3A-201ENST00000216211 HMMRO75330 724 aa18.21■□□□□ 0.51
UPK3A-201ENST00000216211 IFIT2P09913 472 aaKnown RBP18.21■□□□□ 0.51
UPK3A-201ENST00000216211 PDE6AP16499 860 aa18.21■□□□□ 0.51
UPK3A-201ENST00000216211 HERVK_113P62684 666 aa18.21■□□□□ 0.51
UPK3A-201ENST00000216211 SLC9C2Q5TAH2 1124 aa18.21■□□□□ 0.51
UPK3A-201ENST00000216211 UBE2Q1Q7Z7E8 422 aa18.21■□□□□ 0.51
UPK3A-201ENST00000216211 EHD4Q9H223 541 aa18.21■□□□□ 0.51
UPK3A-201ENST00000216211 TXNRD2Q9NNW7 524 aa18.21■□□□□ 0.51
UPK3A-201ENST00000216211 ALPK3Q96L96 1907 aa18.21■□□□□ 0.51
UPK3A-201ENST00000216211 GOLIM4O00461 696 aa18.2■□□□□ 0.5
UPK3A-201ENST00000216211 FARP2O94887 1054 aaPredicted RBP18.2■□□□□ 0.5
UPK3A-201ENST00000216211 PLCD1P51178 756 aa18.2■□□□□ 0.5
UPK3A-201ENST00000216211 ZYXQ15942 572 aaKnown RBP18.2■□□□□ 0.5
UPK3A-201ENST00000216211 USP17L2Q6R6M4 530 aa18.2■□□□□ 0.5
UPK3A-201ENST00000216211 TTC6Q86TZ1 520 aa18.2■□□□□ 0.5
UPK3A-201ENST00000216211 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.2■□□□□ 0.5
UPK3A-201ENST00000216211 DEFB118Q96PH6 123 aa18.2■□□□□ 0.5
UPK3A-201ENST00000216211 EMILIN3Q9NT22 766 aa18.2■□□□□ 0.5
UPK3A-201ENST00000216211 GJD2Q9UKL4 321 aa18.2■□□□□ 0.5
UPK3A-201ENST00000216211 COLQQ9Y215 455 aaPredicted RBP18.2■□□□□ 0.5
UPK3A-201ENST00000216211 TFRCP02786 760 aaKnown RBP18.19■□□□□ 0.5
UPK3A-201ENST00000216211 RAB3GAP1Q15042 981 aa18.19■□□□□ 0.5
UPK3A-201ENST00000216211 CERKLQ49MI3 558 aaPredicted RBP18.19■□□□□ 0.5
UPK3A-201ENST00000216211 EDC3Q96F86 508 aaKnown RBP18.19■□□□□ 0.5
UPK3A-201ENST00000216211 PAK6Q9NQU5 681 aaPredicted RBP18.19■□□□□ 0.5
UPK3A-201ENST00000216211 RCAN3Q9UKA8 241 aa18.19■□□□□ 0.5
UPK3A-201ENST00000216211 GTF3C3Q9Y5Q9 886 aa18.19■□□□□ 0.5
UPK3A-201ENST00000216211 ZNF532Q9HCE3 1301 aa18.19■□□□□ 0.5
UPK3A-201ENST00000216211 RAB11FIP3O75154 756 aa18.18■□□□□ 0.5
UPK3A-201ENST00000216211 POLR3DP05423 398 aaPredicted RBP18.18■□□□□ 0.5
UPK3A-201ENST00000216211 TRIM32Q13049 653 aa18.18■□□□□ 0.5
UPK3A-201ENST00000216211 ABCB5Q2M3G0 1257 aa18.18■□□□□ 0.5
UPK3A-201ENST00000216211 Q3C1V9 767 aa18.18■□□□□ 0.5
UPK3A-201ENST00000216211 GPRC5AQ8NFJ5 357 aa18.18■□□□□ 0.5
UPK3A-201ENST00000216211 FEZ1Q99689 392 aa18.18■□□□□ 0.5
UPK3A-201ENST00000216211 HTATIP2Q9BUP3 242 aa18.18■□□□□ 0.5
UPK3A-201ENST00000216211 CRNKL1Q9BZJ0 848 aaKnown RBP18.18■□□□□ 0.5
UPK3A-201ENST00000216211 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.18■□□□□ 0.5
UPK3A-201ENST00000216211 PCDH10Q9P2E7 1040 aa18.18■□□□□ 0.5
UPK3A-201ENST00000216211 RBPJLQ9UBG7 517 aa18.18■□□□□ 0.5
UPK3A-201ENST00000216211 TCRBV5S4A2TA0A5A2 114 aa18.17■□□□□ 0.5
UPK3A-201ENST00000216211 HMGCRP04035 888 aa18.17■□□□□ 0.5
UPK3A-201ENST00000216211 SHMT1P34896 483 aa18.17■□□□□ 0.5
UPK3A-201ENST00000216211 ERVK-9P63128 1117 aa18.17■□□□□ 0.5
UPK3A-201ENST00000216211 ERVK-24P63145 666 aa18.17■□□□□ 0.5
UPK3A-201ENST00000216211 EVX2Q03828 476 aa18.17■□□□□ 0.5
UPK3A-201ENST00000216211 PAGR1Q9BTK6 254 aa18.17■□□□□ 0.5
UPK3A-201ENST00000216211 CYP2B6P20813 491 aa18.16■□□□□ 0.5
UPK3A-201ENST00000216211 C20orf194Q5TEA3 1177 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms