RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 NMT2O60551 498 aa11.72□□□□□ -0.53
RTCB-201ENST00000216038 GABPAQ06546 454 aa11.72□□□□□ -0.53
RTCB-201ENST00000216038 SHROOM1Q2M3G4 852 aaPredicted RBP11.72□□□□□ -0.53
RTCB-201ENST00000216038 DHX32Q7L7V1 743 aaKnown RBP11.72□□□□□ -0.53
RTCB-201ENST00000216038 APOBEC3FQ8IUX4 373 aaKnown RBP11.72□□□□□ -0.53
RTCB-201ENST00000216038 TRIM34Q9BYJ4 488 aa11.72□□□□□ -0.53
RTCB-201ENST00000216038 KRT23Q9C075 422 aa11.72□□□□□ -0.53
RTCB-201ENST00000216038 CNNM2Q9H8M5 875 aa11.72□□□□□ -0.53
RTCB-201ENST00000216038 PDRG1Q9NUG6 133 aa11.72□□□□□ -0.53
RTCB-201ENST00000216038 PGAP2Q9UHJ9 254 aa11.72□□□□□ -0.53
RTCB-201ENST00000216038 TSPY2A6NKD2 308 aa11.72□□□□□ -0.53
RTCB-201ENST00000216038 RASA1P20936 1047 aa11.72□□□□□ -0.53
RTCB-201ENST00000216038 MCM5P33992 734 aa11.72□□□□□ -0.53
RTCB-201ENST00000216038 SHMT1P34896 483 aa11.72□□□□□ -0.53
RTCB-201ENST00000216038 FGD1P98174 961 aa11.72□□□□□ -0.53
RTCB-201ENST00000216038 Q6ZUG5 572 aa11.72□□□□□ -0.53
RTCB-201ENST00000216038 KRT26Q7Z3Y9 468 aa11.72□□□□□ -0.53
RTCB-201ENST00000216038 ESR2Q92731 530 aa11.72□□□□□ -0.53
RTCB-201ENST00000216038 PCNTO95613 3336 aa11.72□□□□□ -0.53
RTCB-201ENST00000216038 ORC4O43929 436 aa11.71□□□□□ -0.53
RTCB-201ENST00000216038 HMGB1P09429 215 aaKnown RBP11.71□□□□□ -0.53
RTCB-201ENST00000216038 FGRP09769 529 aa11.71□□□□□ -0.53
RTCB-201ENST00000216038 XRCC6P12956 609 aaKnown RBP eCLIP11.71□□□□□ -0.53
RTCB-201ENST00000216038 AK2P54819 239 aa11.71□□□□□ -0.53
RTCB-201ENST00000216038 TFAP4Q01664 338 aa11.71□□□□□ -0.53
RTCB-201ENST00000216038 EXOSC10Q01780 885 aaKnown RBP11.71□□□□□ -0.53
RTCB-201ENST00000216038 PRKG1Q13976 671 aa11.71□□□□□ -0.53
RTCB-201ENST00000216038 MAP1SQ66K74 1059 aaPredicted RBP11.71□□□□□ -0.53
RTCB-201ENST00000216038 USP48Q86UV5 1035 aa11.71□□□□□ -0.53
RTCB-201ENST00000216038 PNMA8AQ86V59 439 aaPredicted RBP11.71□□□□□ -0.53
RTCB-201ENST00000216038 SULF1Q8IWU6 871 aa11.71□□□□□ -0.53
RTCB-201ENST00000216038 ZNF444Q8N0Y2 327 aaPredicted RBP11.71□□□□□ -0.53
RTCB-201ENST00000216038 TTC14Q96N46 770 aa11.71□□□□□ -0.53
RTCB-201ENST00000216038 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.71□□□□□ -0.53
RTCB-201ENST00000216038 ST18O60284 1047 aa11.7□□□□□ -0.54
RTCB-201ENST00000216038 GDF11O95390 407 aa11.7□□□□□ -0.54
RTCB-201ENST00000216038 MRE11P49959 708 aa11.7□□□□□ -0.54
RTCB-201ENST00000216038 FOXP4Q8IVH2 680 aaPredicted RBP11.7□□□□□ -0.54
RTCB-201ENST00000216038 GLIS2Q9BZE0 524 aaPredicted RBP11.7□□□□□ -0.54
RTCB-201ENST00000216038 EHD4Q9H223 541 aa11.7□□□□□ -0.54
RTCB-201ENST00000216038 SENP2Q9HC62 589 aa11.7□□□□□ -0.54
RTCB-201ENST00000216038 COL2A1P02458 1487 aaPredicted RBP11.7□□□□□ -0.54
RTCB-201ENST00000216038 PITPNM2Q9BZ72 1349 aa11.7□□□□□ -0.54
RTCB-201ENST00000216038 MPHOSPH10O00566 681 aaKnown RBP11.7□□□□□ -0.54
RTCB-201ENST00000216038 TSPY3P0CV98 308 aa11.7□□□□□ -0.54
RTCB-201ENST00000216038 TSPY8P0CW00 308 aa11.7□□□□□ -0.54
RTCB-201ENST00000216038 AKR1B1P15121 316 aa11.7□□□□□ -0.54
RTCB-201ENST00000216038 FMR1Q06787 632 aaKnown RBP eCLIP11.7□□□□□ -0.54
RTCB-201ENST00000216038 TOB2Q14106 344 aaPredicted RBP11.7□□□□□ -0.54
RTCB-201ENST00000216038 RRP1BQ14684 758 aaKnown RBP11.7□□□□□ -0.54
RTCB-201ENST00000216038 CLEC10AQ8IUN9 316 aa11.7□□□□□ -0.54
RTCB-201ENST00000216038 BRF1Q92994 677 aa11.7□□□□□ -0.54
RTCB-201ENST00000216038 CHMP4CQ96CF2 233 aa11.7□□□□□ -0.54
RTCB-201ENST00000216038 MAP7D2Q96T17 732 aa11.7□□□□□ -0.54
RTCB-201ENST00000216038 ZNF287Q9HBT7 754 aa11.7□□□□□ -0.54
RTCB-201ENST00000216038 IFIT3O14879 490 aaKnown RBP11.69□□□□□ -0.54
RTCB-201ENST00000216038 PCP11498 1178 aaKnown RBP11.69□□□□□ -0.54
RTCB-201ENST00000216038 TERF1P54274 439 aa11.69□□□□□ -0.54
RTCB-201ENST00000216038 JAG1P78504 1218 aa11.69□□□□□ -0.54
RTCB-201ENST00000216038 CERKLQ49MI3 558 aaPredicted RBP11.69□□□□□ -0.54
RTCB-201ENST00000216038 ZC3H15Q8WU90 426 aaKnown RBP11.69□□□□□ -0.54
RTCB-201ENST00000216038 UBAC1Q9BSL1 405 aa11.69□□□□□ -0.54
RTCB-201ENST00000216038 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.69□□□□□ -0.54
RTCB-201ENST00000216038 SWAP70Q9UH65 585 aa11.69□□□□□ -0.54
RTCB-201ENST00000216038 NAP1L2Q9ULW6 460 aaPredicted RBP11.69□□□□□ -0.54
RTCB-201ENST00000216038 TNKSO95271 1327 aa11.69□□□□□ -0.54
RTCB-201ENST00000216038 DTNBO60941 627 aa11.69□□□□□ -0.54
RTCB-201ENST00000216038 APOBRQ0VD83 1088 aa11.69□□□□□ -0.54
RTCB-201ENST00000216038 TMEM67Q5HYA8 995 aa11.69□□□□□ -0.54
RTCB-201ENST00000216038 METTL16Q86W50 562 aaKnown RBP11.69□□□□□ -0.54
RTCB-201ENST00000216038 RAB11FIP4Q86YS3 637 aa11.69□□□□□ -0.54
RTCB-201ENST00000216038 TBC1D2Q9BYX2 928 aa11.69□□□□□ -0.54
RTCB-201ENST00000216038 IL17RBQ9NRM6 502 aa11.69□□□□□ -0.54
RTCB-201ENST00000216038 HERC5Q9UII4 1024 aaKnown RBP11.69□□□□□ -0.54
RTCB-201ENST00000216038 TRAF5O00463 557 aa11.68□□□□□ -0.54
RTCB-201ENST00000216038 STK3Q13188 491 aa11.68□□□□□ -0.54
RTCB-201ENST00000216038 TATDN1Q6P1N9 297 aa11.68□□□□□ -0.54
RTCB-201ENST00000216038 IQCA1Q86XH1 822 aa11.68□□□□□ -0.54
RTCB-201ENST00000216038 ENAHQ8N8S7 591 aaPredicted RBP11.68□□□□□ -0.54
RTCB-201ENST00000216038 IGDCC4Q8TDY8 1250 aa11.68□□□□□ -0.54
RTCB-201ENST00000216038 ZSCAN10Q96SZ4 725 aaPredicted RBP11.68□□□□□ -0.54
RTCB-201ENST00000216038 ESPNB1AK53 854 aa11.67□□□□□ -0.54
RTCB-201ENST00000216038 LARGE1O95461 756 aa11.67□□□□□ -0.54
RTCB-201ENST00000216038 SPRYD3Q8NCJ5 442 aa11.67□□□□□ -0.54
RTCB-201ENST00000216038 MYL10Q9BUA6 226 aa11.67□□□□□ -0.54
RTCB-201ENST00000216038 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.67□□□□□ -0.54
RTCB-201ENST00000216038 GPBP1L1Q9HC44 474 aaPredicted RBP11.67□□□□□ -0.54
RTCB-201ENST00000216038 TPCN1Q9ULQ1 816 aa11.67□□□□□ -0.54
RTCB-201ENST00000216038 STX8Q9UNK0 236 aa11.67□□□□□ -0.54
RTCB-201ENST00000216038 SSC5DA1L4H1 1573 aa11.67□□□□□ -0.54
RTCB-201ENST00000216038 ERICH2A1L162 156 aa11.67□□□□□ -0.54
RTCB-201ENST00000216038 SH2B2O14492 632 aaPredicted RBP11.67□□□□□ -0.54
RTCB-201ENST00000216038 GH2P01242 217 aa11.67□□□□□ -0.54
RTCB-201ENST00000216038 WTAPQ15007 396 aa11.67□□□□□ -0.54
RTCB-201ENST00000216038 SART3Q15020 963 aaKnown RBP11.67□□□□□ -0.54
RTCB-201ENST00000216038 RAB3GAP1Q15042 981 aa11.67□□□□□ -0.54
RTCB-201ENST00000216038 ABCB5Q2M3G0 1257 aa11.67□□□□□ -0.54
RTCB-201ENST00000216038 NFXL1Q6ZNB6 911 aa11.67□□□□□ -0.54
RTCB-201ENST00000216038 CDC37L1Q7L3B6 337 aa11.67□□□□□ -0.54
RTCB-201ENST00000216038 CCDC84Q86UT8 332 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms