RNA–Protein interactions for RNA: ENST00000216014.8

KDELR3-201, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDELR3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-201ENST00000216014 TOMM22Q9NS69 142 aa23.67■■□□□ 1.38
KDELR3-201ENST00000216014 ZNF112Q9UJU3 913 aa23.67■■□□□ 1.38
KDELR3-201ENST00000216014 RBM46Q8TBY0 533 aaKnown RBP23.66■■□□□ 1.38
KDELR3-201ENST00000216014 UPF3BQ9BZI7 483 aaKnown RBP23.66■■□□□ 1.38
KDELR3-201ENST00000216014 ZSWIM5Q9P217 1185 aa23.66■■□□□ 1.38
KDELR3-201ENST00000216014 SWAP70Q9UH65 585 aa23.66■■□□□ 1.38
KDELR3-201ENST00000216014 RANBP6O60518 1105 aaKnown RBP23.65■■□□□ 1.38
KDELR3-201ENST00000216014 CELF2O95319 508 aaKnown RBP23.65■■□□□ 1.38
KDELR3-201ENST00000216014 ZKSCAN1P17029 563 aaPredicted RBP23.65■■□□□ 1.38
KDELR3-201ENST00000216014 MCCP23508 829 aa23.65■■□□□ 1.38
KDELR3-201ENST00000216014 PDE4BQ07343 736 aa23.65■■□□□ 1.38
KDELR3-201ENST00000216014 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.65■■□□□ 1.38
KDELR3-201ENST00000216014 WRNIP1Q96S55 665 aa23.65■■□□□ 1.38
KDELR3-201ENST00000216014 ZKSCAN3Q9BRR0 538 aa23.65■■□□□ 1.38
KDELR3-201ENST00000216014 ZNF341Q9BYN7 854 aa23.65■■□□□ 1.38
KDELR3-201ENST00000216014 LRRC2Q9BYS8 371 aa23.65■■□□□ 1.38
KDELR3-201ENST00000216014 SLC3A2P08195 630 aaKnown RBP23.64■■□□□ 1.38
KDELR3-201ENST00000216014 TFAP4Q01664 338 aa23.64■■□□□ 1.38
KDELR3-201ENST00000216014 CERKLQ49MI3 558 aaPredicted RBP23.64■■□□□ 1.38
KDELR3-201ENST00000216014 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.64■■□□□ 1.38
KDELR3-201ENST00000216014 SMC1BQ8NDV3 1235 aa23.64■■□□□ 1.38
KDELR3-201ENST00000216014 CLMNQ96JQ2 1002 aa23.64■■□□□ 1.38
KDELR3-201ENST00000216014 TRIM34Q9BYJ4 488 aa23.64■■□□□ 1.38
KDELR3-201ENST00000216014 SENP2Q9HC62 589 aa23.64■■□□□ 1.38
KDELR3-201ENST00000216014 IL17RBQ9NRM6 502 aa23.64■■□□□ 1.38
KDELR3-201ENST00000216014 ANGEL1Q9UNK9 670 aaKnown RBP23.64■■□□□ 1.38
KDELR3-201ENST00000216014 UBE2Q2LH0YL09 131 aa23.64■■□□□ 1.37
KDELR3-201ENST00000216014 NEK1Q96PY6 1258 aa23.64■■□□□ 1.37
KDELR3-201ENST00000216014 RNF41Q9H4P4 317 aaPredicted RBP23.64■■□□□ 1.37
KDELR3-201ENST00000216014 EIF5BO60841 1220 aaKnown RBP23.63■■□□□ 1.37
KDELR3-201ENST00000216014 GH2P01242 217 aa23.63■■□□□ 1.37
KDELR3-201ENST00000216014 CASTP20810 708 aaKnown RBP23.63■■□□□ 1.37
KDELR3-201ENST00000216014 CAP2P40123 477 aa23.63■■□□□ 1.37
KDELR3-201ENST00000216014 ANAPC15P60006 121 aa23.63■■□□□ 1.37
KDELR3-201ENST00000216014 DCAF15Q66K64 600 aa23.63■■□□□ 1.37
KDELR3-201ENST00000216014 UPF2Q9HAU5 1272 aaKnown RBP23.63■■□□□ 1.37
KDELR3-201ENST00000216014 NCOA7Q8NI08 942 aa23.62■■□□□ 1.37
KDELR3-201ENST00000216014 CNKSR2Q8WXI2 1034 aa23.62■■□□□ 1.37
KDELR3-201ENST00000216014 ZSWIM6Q9HCJ5 1215 aa23.62■■□□□ 1.37
KDELR3-201ENST00000216014 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.62■■□□□ 1.37
KDELR3-201ENST00000216014 MYH4Q9Y623 1939 aa23.62■■□□□ 1.37
KDELR3-201ENST00000216014 IGKV6D-41A0A0C4DH26 115 aa23.62■■□□□ 1.37
KDELR3-201ENST00000216014 EXOSC10Q01780 885 aaKnown RBP23.62■■□□□ 1.37
KDELR3-201ENST00000216014 VGLL4Q14135 290 aa23.62■■□□□ 1.37
KDELR3-201ENST00000216014 SEPT2Q15019 361 aa23.62■■□□□ 1.37
KDELR3-201ENST00000216014 SIAH1Q8IUQ4 282 aa23.62■■□□□ 1.37
KDELR3-201ENST00000216014 ZNF444Q8N0Y2 327 aaPredicted RBP23.62■■□□□ 1.37
KDELR3-201ENST00000216014 ZBTB21Q9ULJ3 1066 aa23.62■■□□□ 1.37
KDELR3-201ENST00000216014 MPHOSPH10O00566 681 aaKnown RBP23.61■■□□□ 1.37
KDELR3-201ENST00000216014 ABCB5Q2M3G0 1257 aa23.61■■□□□ 1.37
KDELR3-201ENST00000216014 SNCAIPQ9Y6H5 919 aa23.61■■□□□ 1.37
KDELR3-201ENST00000216014 PLIN4Q96Q06 1357 aa23.6■■□□□ 1.37
KDELR3-201ENST00000216014 TSPY2A6NKD2 308 aa23.6■■□□□ 1.37
KDELR3-201ENST00000216014 PCP11498 1178 aaKnown RBP23.6■■□□□ 1.37
KDELR3-201ENST00000216014 TTLL12Q14166 644 aaPredicted RBP23.6■■□□□ 1.37
KDELR3-201ENST00000216014 MAP3K11Q16584 847 aa23.6■■□□□ 1.37
KDELR3-201ENST00000216014 RCSD1Q6JBY9 416 aa23.6■■□□□ 1.37
KDELR3-201ENST00000216014 NEDD1Q8NHV4 660 aa23.6■■□□□ 1.37
KDELR3-201ENST00000216014 ESR2Q92731 530 aa23.6■■□□□ 1.37
KDELR3-201ENST00000216014 KRT23Q9C075 422 aa23.6■■□□□ 1.37
KDELR3-201ENST00000216014 CNNM2Q9H8M5 875 aa23.6■■□□□ 1.37
KDELR3-201ENST00000216014 GBA2Q9HCG7 927 aaPredicted RBP23.6■■□□□ 1.37
KDELR3-201ENST00000216014 PRC1O43663 620 aa23.59■■□□□ 1.37
KDELR3-201ENST00000216014 RPS6KB1P23443 525 aa23.59■■□□□ 1.37
KDELR3-201ENST00000216014 NF2P35240 595 aa23.59■■□□□ 1.37
KDELR3-201ENST00000216014 KRT32Q14532 448 aa23.59■■□□□ 1.37
KDELR3-201ENST00000216014 LDLRAD1Q5T700 205 aa23.59■■□□□ 1.37
KDELR3-201ENST00000216014 RALYLQ86SE5 291 aaKnown RBP23.59■■□□□ 1.37
KDELR3-201ENST00000216014 HOOK2Q96ED9 719 aa23.59■■□□□ 1.37
KDELR3-201ENST00000216014 CEP95Q96GE4 821 aa23.59■■□□□ 1.37
KDELR3-201ENST00000216014 TM6SF1Q9BZW5 370 aa23.59■■□□□ 1.37
KDELR3-201ENST00000216014 PPP1R12BO60237 982 aaPredicted RBP23.59■■□□□ 1.37
KDELR3-201ENST00000216014 TSPY3P0CV98 308 aa23.59■■□□□ 1.37
KDELR3-201ENST00000216014 TSPY8P0CW00 308 aa23.59■■□□□ 1.37
KDELR3-201ENST00000216014 CTNND1O60716 968 aaKnown RBP23.58■■□□□ 1.37
KDELR3-201ENST00000216014 MAP3K9P80192 1104 aa23.58■■□□□ 1.37
KDELR3-201ENST00000216014 TRDNQ13061 729 aa23.58■■□□□ 1.37
KDELR3-201ENST00000216014 BLOC1S2Q6QNY1 142 aa23.58■■□□□ 1.37
KDELR3-201ENST00000216014 RUFY3Q7L099 469 aa23.58■■□□□ 1.37
KDELR3-201ENST00000216014 IGDCC4Q8TDY8 1250 aa23.58■■□□□ 1.37
KDELR3-201ENST00000216014 LARP6Q9BRS8 491 aaKnown RBP23.58■■□□□ 1.37
KDELR3-201ENST00000216014 PTPRFP10586 1907 aa23.57■■□□□ 1.36
KDELR3-201ENST00000216014 CD2BP2O95400 341 aaKnown RBP23.57■■□□□ 1.36
KDELR3-201ENST00000216014 RAB3GAP1Q15042 981 aa23.57■■□□□ 1.36
KDELR3-201ENST00000216014 SEC23AQ15436 765 aa23.57■■□□□ 1.36
KDELR3-201ENST00000216014 DHX32Q7L7V1 743 aaKnown RBP23.57■■□□□ 1.36
KDELR3-201ENST00000216014 SCYL3Q8IZE3 742 aa23.57■■□□□ 1.36
KDELR3-201ENST00000216014 ENAHQ8N8S7 591 aaPredicted RBP23.57■■□□□ 1.36
KDELR3-201ENST00000216014 CCDC17Q96LX7 622 aa23.57■■□□□ 1.36
KDELR3-201ENST00000216014 TTC14Q96N46 770 aa23.57■■□□□ 1.36
KDELR3-201ENST00000216014 A0A1W2PRG0 241 aa23.56■■□□□ 1.36
KDELR3-201ENST00000216014 MCM5P33992 734 aa23.56■■□□□ 1.36
KDELR3-201ENST00000216014 NOL9Q5SY16 702 aaKnown RBP23.56■■□□□ 1.36
KDELR3-201ENST00000216014 RASGRP2Q7LDG7 609 aa23.56■■□□□ 1.36
KDELR3-201ENST00000216014 ACER1Q8TDN7 264 aa23.56■■□□□ 1.36
KDELR3-201ENST00000216014 ELP3Q9H9T3 547 aa23.56■■□□□ 1.36
KDELR3-201ENST00000216014 ZNF287Q9HBT7 754 aa23.56■■□□□ 1.36
KDELR3-201ENST00000216014 TAOK2Q9UL54 1235 aa23.56■■□□□ 1.36
KDELR3-201ENST00000216014 TNKSO95271 1327 aa23.56■■□□□ 1.36
KDELR3-201ENST00000216014 IREB2P48200 963 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms