RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 DDX41Q9UJV9 622 aaKnown RBP17.21■□□□□ 0.35
EFNB1-201ENST00000204961 CTNND2Q9UQB3 1225 aa17.21■□□□□ 0.35
EFNB1-201ENST00000204961 CASQ1P31415 396 aa17.21■□□□□ 0.35
EFNB1-201ENST00000204961 UBE3CQ15386 1083 aa17.21■□□□□ 0.35
EFNB1-201ENST00000204961 KCTD19Q17RG1 926 aaPredicted RBP17.21■□□□□ 0.35
EFNB1-201ENST00000204961 RESP18Q5W5W9 173 aa17.21■□□□□ 0.35
EFNB1-201ENST00000204961 SYMPKQ92797 1274 aaKnown RBP17.21■□□□□ 0.35
EFNB1-201ENST00000204961 MAGEB6P1A0A0J9YX57 407 aa17.21■□□□□ 0.34
EFNB1-201ENST00000204961 PP2D1A8MPX8 630 aa17.21■□□□□ 0.34
EFNB1-201ENST00000204961 MMP1P03956 469 aa17.21■□□□□ 0.34
EFNB1-201ENST00000204961 GOLGA8HP0CJ92 632 aa17.21■□□□□ 0.34
EFNB1-201ENST00000204961 ATL3Q6DD88 541 aa17.21■□□□□ 0.34
EFNB1-201ENST00000204961 NLRP5P59047 1200 aa17.2■□□□□ 0.34
EFNB1-201ENST00000204961 MRPS25P82663 173 aaKnown RBP17.2■□□□□ 0.34
EFNB1-201ENST00000204961 MCM6Q14566 821 aa17.2■□□□□ 0.34
EFNB1-201ENST00000204961 OSBPL5Q9H0X9 879 aaPredicted RBP17.2■□□□□ 0.34
EFNB1-201ENST00000204961 TAB2Q9NYJ8 693 aa17.2■□□□□ 0.34
EFNB1-201ENST00000204961 LAMA4Q16363 1823 aa17.2■□□□□ 0.34
EFNB1-201ENST00000204961 CUTAO60888 179 aa17.2■□□□□ 0.34
EFNB1-201ENST00000204961 CRKLP46109 303 aaKnown RBP17.2■□□□□ 0.34
EFNB1-201ENST00000204961 RRAGBQ5VZM2 374 aa17.2■□□□□ 0.34
EFNB1-201ENST00000204961 CRACR2BQ8N4Y2 399 aaPredicted RBP17.2■□□□□ 0.34
EFNB1-201ENST00000204961 ACRBPQ8NEB7 543 aa17.2■□□□□ 0.34
EFNB1-201ENST00000204961 TMEM87BQ96K49 555 aa17.2■□□□□ 0.34
EFNB1-201ENST00000204961 UQCRFS1P1P0C7P4 283 aa17.19■□□□□ 0.34
EFNB1-201ENST00000204961 CD44P16070 742 aaKnown RBP17.19■□□□□ 0.34
EFNB1-201ENST00000204961 TCRBV5S4A2TA0A5A2 114 aa17.19■□□□□ 0.34
EFNB1-201ENST00000204961 PPFIBP1Q86W92 1011 aa17.19■□□□□ 0.34
EFNB1-201ENST00000204961 VGLL2Q8N8G2 317 aa17.19■□□□□ 0.34
EFNB1-201ENST00000204961 NEK11Q8NG66 645 aa17.19■□□□□ 0.34
EFNB1-201ENST00000204961 MED15Q96RN5 788 aa17.19■□□□□ 0.34
EFNB1-201ENST00000204961 FEZ1Q99689 392 aa17.19■□□□□ 0.34
EFNB1-201ENST00000204961 RIC1Q4ADV7 1423 aa17.19■□□□□ 0.34
EFNB1-201ENST00000204961 TRIM75PA6NK02 468 aa17.19■□□□□ 0.34
EFNB1-201ENST00000204961 TMCO3Q6UWJ1 677 aa17.19■□□□□ 0.34
EFNB1-201ENST00000204961 VSTM4Q8IW00 320 aa17.19■□□□□ 0.34
EFNB1-201ENST00000204961 IGSF22Q8N9C0 903 aa17.19■□□□□ 0.34
EFNB1-201ENST00000204961 CDC5LQ99459 802 aaKnown RBP17.19■□□□□ 0.34
EFNB1-201ENST00000204961 MRPL44Q9H9J2 332 aaKnown RBP17.19■□□□□ 0.34
EFNB1-201ENST00000204961 MYO5AQ9Y4I1 1855 aaKnown RBP17.19■□□□□ 0.34
EFNB1-201ENST00000204961 OVOS2A0A0G2JMS6 1433 aa17.19■□□□□ 0.34
EFNB1-201ENST00000204961 PIP4K2BP78356 416 aa17.18■□□□□ 0.34
EFNB1-201ENST00000204961 RBL2Q08999 1139 aa17.18■□□□□ 0.34
EFNB1-201ENST00000204961 PTGDRQ13258 359 aa17.18■□□□□ 0.34
EFNB1-201ENST00000204961 ERFEQ4G0M1 354 aa17.18■□□□□ 0.34
EFNB1-201ENST00000204961 PTF1AQ7RTS3 328 aa17.18■□□□□ 0.34
EFNB1-201ENST00000204961 SHISA4Q96DD7 197 aa17.18■□□□□ 0.34
EFNB1-201ENST00000204961 PCMTD1Q96MG8 357 aaPredicted RBP17.18■□□□□ 0.34
EFNB1-201ENST00000204961 SUGCTQ9HAC7 445 aa17.18■□□□□ 0.34
EFNB1-201ENST00000204961 SAP30BPQ9UHR5 308 aaKnown RBP17.18■□□□□ 0.34
EFNB1-201ENST00000204961 CBFA2T2O43439 604 aa17.18■□□□□ 0.34
EFNB1-201ENST00000204961 DNA2P51530 1060 aa17.18■□□□□ 0.34
EFNB1-201ENST00000204961 ZNF569Q5MCW4 686 aa17.18■□□□□ 0.34
EFNB1-201ENST00000204961 DYNLL2Q96FJ2 89 aa17.18■□□□□ 0.34
EFNB1-201ENST00000204961 PLEKHA4Q9H4M7 779 aa17.18■□□□□ 0.34
EFNB1-201ENST00000204961 STX8Q9UNK0 236 aa17.18■□□□□ 0.34
EFNB1-201ENST00000204961 CPDO75976 1380 aa17.18■□□□□ 0.34
EFNB1-201ENST00000204961 FMNL1O95466 1100 aaPredicted RBP17.18■□□□□ 0.34
EFNB1-201ENST00000204961 CASP14P31944 242 aa17.18■□□□□ 0.34
EFNB1-201ENST00000204961 ENAHQ8N8S7 591 aaPredicted RBP17.18■□□□□ 0.34
EFNB1-201ENST00000204961 CELF1Q92879 486 aaKnown RBP17.18■□□□□ 0.34
EFNB1-201ENST00000204961 KRT23Q9C075 422 aa17.18■□□□□ 0.34
EFNB1-201ENST00000204961 FBXO2Q9UK22 296 aaPredicted RBP17.18■□□□□ 0.34
EFNB1-201ENST00000204961 TSPY2A6NKD2 308 aa17.17■□□□□ 0.34
EFNB1-201ENST00000204961 N4BP3O15049 544 aa17.17■□□□□ 0.34
EFNB1-201ENST00000204961 PRDX5P30044 214 aa17.17■□□□□ 0.34
EFNB1-201ENST00000204961 KIF4BQ2VIQ3 1234 aa17.17■□□□□ 0.34
EFNB1-201ENST00000204961 NUP88Q99567 741 aaPredicted RBP17.17■□□□□ 0.34
EFNB1-201ENST00000204961 CRYBG1Q9Y4K1 1723 aa17.17■□□□□ 0.34
EFNB1-201ENST00000204961 SLIT3O75094 1523 aa17.17■□□□□ 0.34
EFNB1-201ENST00000204961 TRIM49BA6NDI0 452 aa17.17■□□□□ 0.34
EFNB1-201ENST00000204961 SLC44A5Q8NCS7 719 aa17.17■□□□□ 0.34
EFNB1-201ENST00000204961 ENC1O14682 589 aa17.16■□□□□ 0.34
EFNB1-201ENST00000204961 TEX13AQ9BXU3 409 aaPredicted RBP17.16■□□□□ 0.34
EFNB1-201ENST00000204961 IMPACTQ9P2X3 320 aa17.16■□□□□ 0.34
EFNB1-201ENST00000204961 GDAQ9Y2T3 454 aa17.16■□□□□ 0.34
EFNB1-201ENST00000204961 IFNAR1P17181 557 aa17.16■□□□□ 0.34
EFNB1-201ENST00000204961 CATIPQ7Z7H3 387 aa17.16■□□□□ 0.34
EFNB1-201ENST00000204961 REXO1L1PQ8IX06 675 aa17.16■□□□□ 0.34
EFNB1-201ENST00000204961 SLF1Q9BQI6 1058 aa17.16■□□□□ 0.34
EFNB1-201ENST00000204961 SRP68Q9UHB9 627 aaKnown RBP17.16■□□□□ 0.34
EFNB1-201ENST00000204961 HOOK1Q9UJC3 728 aaKnown RBP17.16■□□□□ 0.34
EFNB1-201ENST00000204961 HPSEQ9Y251 543 aa17.16■□□□□ 0.34
EFNB1-201ENST00000204961 DEXIO95424 95 aa17.16■□□□□ 0.34
EFNB1-201ENST00000204961 CCDC152Q4G0S7 254 aa17.16■□□□□ 0.34
EFNB1-201ENST00000204961 ESR2Q92731 530 aa17.16■□□□□ 0.34
EFNB1-201ENST00000204961 MCM9Q9NXL9 1143 aa17.16■□□□□ 0.34
EFNB1-201ENST00000204961 TRIM10Q9UDY6 481 aa17.16■□□□□ 0.34
EFNB1-201ENST00000204961 ARFGEF2Q9Y6D5 1785 aa17.15■□□□□ 0.34
EFNB1-201ENST00000204961 ZMYND10O75800 440 aa17.15■□□□□ 0.34
EFNB1-201ENST00000204961 USP17L8P0C7I0 530 aa17.15■□□□□ 0.34
EFNB1-201ENST00000204961 ITPK1Q13572 414 aa17.15■□□□□ 0.34
EFNB1-201ENST00000204961 SPECC1LQ69YQ0 1117 aa17.15■□□□□ 0.34
EFNB1-201ENST00000204961 CAPZA3Q96KX2 299 aa17.15■□□□□ 0.34
EFNB1-201ENST00000204961 DRC1Q96MC2 740 aa17.15■□□□□ 0.34
EFNB1-201ENST00000204961 NOL10Q9BSC4 688 aaKnown RBP17.15■□□□□ 0.34
EFNB1-201ENST00000204961 TUBE1Q9UJT0 475 aa17.15■□□□□ 0.34
EFNB1-201ENST00000204961 RFX7Q2KHR2 1363 aa17.15■□□□□ 0.34
EFNB1-201ENST00000204961 PPP6R2O75170 966 aa17.15■□□□□ 0.34
EFNB1-201ENST00000204961 DPYDQ12882 1025 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms