RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 PARP3Q9Y6F1 533 aa19.42■□□□□ 0.7
PTPN18-201ENST00000175756 ZMYND10O75800 440 aa19.41■□□□□ 0.7
PTPN18-201ENST00000175756 KRT2P35908 639 aa19.41■□□□□ 0.7
PTPN18-201ENST00000175756 TRIM21P19474 475 aaKnown RBP19.41■□□□□ 0.7
PTPN18-201ENST00000175756 DNAJC21Q5F1R6 531 aaKnown RBP19.41■□□□□ 0.7
PTPN18-201ENST00000175756 DZIP3Q86Y13 1208 aaKnown RBP19.41■□□□□ 0.7
PTPN18-201ENST00000175756 REXO1L1PQ8IX06 675 aa19.41■□□□□ 0.7
PTPN18-201ENST00000175756 RGS22Q8NE09 1264 aa19.41■□□□□ 0.7
PTPN18-201ENST00000175756 CCDC47Q96A33 483 aaKnown RBP19.41■□□□□ 0.7
PTPN18-201ENST00000175756 HEG1Q9ULI3 1381 aa19.41■□□□□ 0.7
PTPN18-201ENST00000175756 NOM1Q5C9Z4 860 aaKnown RBP19.41■□□□□ 0.7
PTPN18-201ENST00000175756 HDXQ7Z353 690 aa19.41■□□□□ 0.7
PTPN18-201ENST00000175756 ZBTB38Q8NAP3 1195 aaPredicted RBP19.41■□□□□ 0.7
PTPN18-201ENST00000175756 SYMPKQ92797 1274 aaKnown RBP19.41■□□□□ 0.7
PTPN18-201ENST00000175756 CTAGE1Q96RT6 745 aa19.41■□□□□ 0.7
PTPN18-201ENST00000175756 PSMB7Q99436 277 aa19.41■□□□□ 0.7
PTPN18-201ENST00000175756 PLEKHA4Q9H4M7 779 aa19.41■□□□□ 0.7
PTPN18-201ENST00000175756 NCAPD2Q15021 1401 aa19.41■□□□□ 0.7
PTPN18-201ENST00000175756 ADGRL3Q9HAR2 1447 aa19.41■□□□□ 0.7
PTPN18-201ENST00000175756 CYP2D7A0A087X1C5 515 aa19.4■□□□□ 0.7
PTPN18-201ENST00000175756 PDE8BO95263 885 aa19.4■□□□□ 0.7
PTPN18-201ENST00000175756 TFRCP02786 760 aaKnown RBP19.4■□□□□ 0.7
PTPN18-201ENST00000175756 H2AFXP16104 143 aaPredicted RBP19.4■□□□□ 0.7
PTPN18-201ENST00000175756 STIM1Q13586 685 aa19.4■□□□□ 0.7
PTPN18-201ENST00000175756 PCDH11XQ9BZA7 1347 aa19.4■□□□□ 0.7
PTPN18-201ENST00000175756 PCDH11YQ9BZA8 1340 aa19.4■□□□□ 0.7
PTPN18-201ENST00000175756 CNGA4Q8IV77 575 aa19.4■□□□□ 0.7
PTPN18-201ENST00000175756 AGXT2Q9BYV1 514 aa19.4■□□□□ 0.7
PTPN18-201ENST00000175756 TANGO6Q9C0B7 1094 aa19.4■□□□□ 0.7
PTPN18-201ENST00000175756 MRPL44Q9H9J2 332 aaKnown RBP19.4■□□□□ 0.7
PTPN18-201ENST00000175756 MMP1P03956 469 aa19.4■□□□□ 0.7
PTPN18-201ENST00000175756 GBP3Q9H0R5 595 aa19.4■□□□□ 0.7
PTPN18-201ENST00000175756 GNL3LQ9NVN8 582 aaKnown RBP19.4■□□□□ 0.7
PTPN18-201ENST00000175756 UBA7P41226 1012 aa19.39■□□□□ 0.7
PTPN18-201ENST00000175756 STAT6P42226 847 aa19.39■□□□□ 0.7
PTPN18-201ENST00000175756 PUM3Q15397 648 aaKnown RBP19.39■□□□□ 0.7
PTPN18-201ENST00000175756 RABGGTAQ92696 567 aa19.39■□□□□ 0.7
PTPN18-201ENST00000175756 NAPGQ99747 312 aaPredicted RBP19.39■□□□□ 0.7
PTPN18-201ENST00000175756 SUGCTQ9HAC7 445 aa19.39■□□□□ 0.7
PTPN18-201ENST00000175756 SALL1Q9NSC2 1324 aa19.39■□□□□ 0.7
PTPN18-201ENST00000175756 BAZ2BQ9UIF8 2168 aaKnown RBP19.39■□□□□ 0.69
PTPN18-201ENST00000175756 MACROD2A1Z1Q3 448 aa19.39■□□□□ 0.69
PTPN18-201ENST00000175756 CTSWP56202 376 aa19.39■□□□□ 0.69
PTPN18-201ENST00000175756 TMTC2Q8N394 836 aa19.39■□□□□ 0.69
PTPN18-201ENST00000175756 SMARCC1Q92922 1105 aaPredicted RBP19.39■□□□□ 0.69
PTPN18-201ENST00000175756 STRBPQ96SI9 672 aaKnown RBP19.39■□□□□ 0.69
PTPN18-201ENST00000175756 LY9Q9HBG7 655 aa19.39■□□□□ 0.69
PTPN18-201ENST00000175756 TSPY2A6NKD2 308 aa19.39■□□□□ 0.69
PTPN18-201ENST00000175756 MTIF2P46199 727 aaKnown RBP19.39■□□□□ 0.69
PTPN18-201ENST00000175756 PLCD1P51178 756 aa19.39■□□□□ 0.69
PTPN18-201ENST00000175756 CCDC122Q5T0U0 273 aa19.39■□□□□ 0.69
PTPN18-201ENST00000175756 LCORLQ8N3X6 602 aa19.39■□□□□ 0.69
PTPN18-201ENST00000175756 TUBE1Q9UJT0 475 aa19.39■□□□□ 0.69
PTPN18-201ENST00000175756 PCCAP05165 728 aaPredicted RBP19.38■□□□□ 0.69
PTPN18-201ENST00000175756 CASP7P55210 303 aa19.38■□□□□ 0.69
PTPN18-201ENST00000175756 CCDC181Q5TID7 509 aa19.38■□□□□ 0.69
PTPN18-201ENST00000175756 IQUBQ8NA54 791 aa19.38■□□□□ 0.69
PTPN18-201ENST00000175756 TTLL11Q8NHH1 800 aa19.38■□□□□ 0.69
PTPN18-201ENST00000175756 CENPHQ9H3R5 247 aa19.38■□□□□ 0.69
PTPN18-201ENST00000175756 VAT1LQ9HCJ6 419 aa19.38■□□□□ 0.69
PTPN18-201ENST00000175756 NRXN3Q9Y4C0 1643 aa19.38■□□□□ 0.69
PTPN18-201ENST00000175756 CTR9Q6PD62 1173 aa19.38■□□□□ 0.69
PTPN18-201ENST00000175756 TC2NQ8N9U0 490 aa19.38■□□□□ 0.69
PTPN18-201ENST00000175756 ENOX1Q8TC92 643 aaKnown RBP19.38■□□□□ 0.69
PTPN18-201ENST00000175756 SEC31BQ9NQW1 1179 aa19.38■□□□□ 0.69
PTPN18-201ENST00000175756 LPIN2Q92539 896 aa19.38■□□□□ 0.69
PTPN18-201ENST00000175756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.38■□□□□ 0.69
PTPN18-201ENST00000175756 TNKSO95271 1327 aa19.38■□□□□ 0.69
PTPN18-201ENST00000175756 MAGEB6P1A0A0J9YX57 407 aa19.37■□□□□ 0.69
PTPN18-201ENST00000175756 CCDC194A0A1B0GVG4 234 aa19.37■□□□□ 0.69
PTPN18-201ENST00000175756 FMNL1O95466 1100 aaPredicted RBP19.37■□□□□ 0.69
PTPN18-201ENST00000175756 IRX5P78411 483 aaPredicted RBP19.37■□□□□ 0.69
PTPN18-201ENST00000175756 FAM47AQ5JRC9 791 aa19.37■□□□□ 0.69
PTPN18-201ENST00000175756 TRIM65Q6PJ69 517 aa19.37■□□□□ 0.69
PTPN18-201ENST00000175756 SRGAP1Q7Z6B7 1085 aa19.37■□□□□ 0.69
PTPN18-201ENST00000175756 NOC3LQ8WTT2 800 aaKnown RBP19.37■□□□□ 0.69
PTPN18-201ENST00000175756 ADAM21Q9UKJ8 722 aa19.37■□□□□ 0.69
PTPN18-201ENST00000175756 PTGDRQ13258 359 aa19.37■□□□□ 0.69
PTPN18-201ENST00000175756 UBE3CQ15386 1083 aa19.37■□□□□ 0.69
PTPN18-201ENST00000175756 CCDC178Q5BJE1 867 aa19.37■□□□□ 0.69
PTPN18-201ENST00000175756 TTC38Q5R3I4 469 aa19.37■□□□□ 0.69
PTPN18-201ENST00000175756 SPATA1Q5VX52 437 aa19.37■□□□□ 0.69
PTPN18-201ENST00000175756 NCAPH2Q6IBW4 605 aa19.37■□□□□ 0.69
PTPN18-201ENST00000175756 FAN1Q9Y2M0 1017 aa19.37■□□□□ 0.69
PTPN18-201ENST00000175756 LUC7L2Q9Y383 392 aaKnown RBP19.37■□□□□ 0.69
PTPN18-201ENST00000175756 AKAP12Q02952 1782 aa19.37■□□□□ 0.69
PTPN18-201ENST00000175756 SSBP05455 408 aaKnown RBP eCLIP19.37■□□□□ 0.69
PTPN18-201ENST00000175756 XRN1Q8IZH2 1706 aaKnown RBP19.37■□□□□ 0.69
PTPN18-201ENST00000175756 RFX7Q2KHR2 1363 aa19.36■□□□□ 0.69
PTPN18-201ENST00000175756 IFNAR1P17181 557 aa19.36■□□□□ 0.69
PTPN18-201ENST00000175756 PTPREP23469 700 aa19.36■□□□□ 0.69
PTPN18-201ENST00000175756 PDE4CQ08493 712 aa19.36■□□□□ 0.69
PTPN18-201ENST00000175756 PTPAQ15257 358 aa19.36■□□□□ 0.69
PTPN18-201ENST00000175756 CDC23Q9UJX2 597 aa19.36■□□□□ 0.69
PTPN18-201ENST00000175756 ACSBG1Q96GR2 724 aa19.36■□□□□ 0.69
PTPN18-201ENST00000175756 ABCB6Q9NP58 842 aa19.36■□□□□ 0.69
PTPN18-201ENST00000175756 A0A0U1RQJ8 604 aa19.36■□□□□ 0.69
PTPN18-201ENST00000175756 POTEB2H3BUK9 544 aa19.36■□□□□ 0.69
PTPN18-201ENST00000175756 RASGRF1Q13972 1273 aa19.36■□□□□ 0.69
PTPN18-201ENST00000175756 ATRIPQ8WXE1 791 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms