RNA–Protein interactions for RNA: ENSMUST00000208255.1

Pcf11-205, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

BASIC

Gene Pcf11, Length 1,720 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-205ENSMUST00000208255 Trim59Q922Y2 403 aa28.24■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Cnpy3Q9DAU1 276 aa28.24■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Ddx20Q9JJY4 825 aaKnown RBP28.24■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Tmod2Q9JKK7 351 aa28.24■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Cry2Q9R194 592 aa28.24■■■□□ 2.11
Pcf11-205ENSMUST00000208255 B3galt4Q9Z0F0 371 aa28.24■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Trpm7Q923J1 1863 aa28.24■■■□□ 2.11
Pcf11-205ENSMUST00000208255 A0A1W2P6Q8 802 aa28.23■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Gm9048A0A1W2P7H4 802 aa28.23■■■□□ 2.11
Pcf11-205ENSMUST00000208255 A0A1W2P7Z8 802 aa28.23■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Gm9046A0A1W2P855 802 aa28.23■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Angel2Q8K1C0 544 aa28.23■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Nup133Q8R0G9 1155 aa28.23■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Igf2bp3Q9CPN8 579 aaKnown RBP28.23■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Ccdc47Q9D024 483 aaKnown RBP28.23■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Metap2O08663 478 aaKnown RBP28.23■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Eif5P59325 429 aaKnown RBP28.23■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Bag4Q8CI61 457 aa28.23■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Col2a1P28481 1487 aa28.23■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Nmt2O70311 529 aa28.22■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Me1P06801 572 aa28.22■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Akap4Q60662 849 aa28.22■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Zfp113Q8C689 439 aa28.22■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Polr2aP08775 1970 aaKnown RBP28.21■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Dnajc2P54103 621 aaKnown RBP28.21■■■□□ 2.11
Pcf11-205ENSMUST00000208255 PogkQ80TC5 607 aa28.21■■■□□ 2.11
Pcf11-205ENSMUST00000208255 ZwintQ9CQU5 252 aa28.21■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Txnrd2Q9JLT4 524 aa28.21■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Cacna1fQ9JIS7 1985 aa28.21■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Prr16A3KMN5 304 aa28.21■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Gm20425E9Q035 978 aaKnown RBP28.21■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Ptpn12P35831 775 aa28.21■■■□□ 2.11
Pcf11-205ENSMUST00000208255 SrprbP47758 269 aa28.21■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Slc9c1Q6UJY2 1175 aa28.21■■■□□ 2.11
Pcf11-205ENSMUST00000208255 Eya3P97480 510 aa28.2■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Gm11437Q5QR91 290 aa28.2■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Tmem130Q6NXM3 419 aa28.2■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Atrnl1Q6A051 1378 aa28.2■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Scn10aQ6QIY3 1958 aa28.2■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Abhd15Q5F2F2 459 aa28.19■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Mapk4Q6P5G0 583 aa28.19■■■□□ 2.1
Pcf11-205ENSMUST00000208255 TicrrQ8BQ33 1889 aa28.19■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Ppfia3P60469 1194 aa28.18■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Zmym2Q9CU65 1376 aa28.18■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Fam205a1D3YZF6 1314 aa28.18■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Tekt3Q6X6Z7 490 aa28.18■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Ppp1r11Q8K1L5 131 aa28.18■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Mrpl44Q9CY73 333 aaKnown RBP28.18■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Klrc1Q9Z202 244 aa28.18■■■□□ 2.1
Pcf11-205ENSMUST00000208255 L1camP11627 1260 aa28.17■■■□□ 2.1
Pcf11-205ENSMUST00000208255 OplahQ8K010 1288 aa28.17■■■□□ 2.1
Pcf11-205ENSMUST00000208255 NaspQ99MD9 773 aaKnown RBP28.17■■■□□ 2.1
Pcf11-205ENSMUST00000208255 TrdnE9Q9K5 693 aa28.16■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Usp53P15975 1069 aa28.16■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Bace1P56818 501 aa28.16■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Rc3h1Q4VGL6 1130 aaKnown RBP28.16■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Ccdc148Q6P5U8 527 aa28.16■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Pip5kl1Q6U7H8 395 aa28.16■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Phf20Q8BLG0 1010 aaKnown RBP28.16■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Epc2Q8C0I4 808 aa28.16■■■□□ 2.1
Pcf11-205ENSMUST00000208255 C8aQ8K182 587 aa28.16■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Tjap1Q9DCD5 539 aa28.16■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Pcdh15Q99PJ1 1943 aa28.16■■■□□ 2.1
Pcf11-205ENSMUST00000208255 TbcaP48428 108 aaKnown RBP28.15■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Mybl2P48972 704 aa28.15■■■□□ 2.1
Pcf11-205ENSMUST00000208255 CtshP49935 333 aa28.15■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Llgl2Q3TJ91 1027 aa28.15■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Fam196bQ6GQV1 535 aa28.15■■■□□ 2.1
Pcf11-205ENSMUST00000208255 DlatQ8BMF4 642 aa28.15■■■□□ 2.1
Pcf11-205ENSMUST00000208255 DpydQ8CHR6 1025 aa28.15■■■□□ 2.1
Pcf11-205ENSMUST00000208255 GrapQ9CX99 217 aa28.15■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Clip2Q9Z0H8 1047 aa28.15■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Foxp1P58462 705 aa28.15■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Leo1Q5XJE5 667 aa28.15■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Apbb1ipQ8R5A3 670 aa28.15■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Gpsm2Q8VDU0 679 aa28.15■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Snapc2Q91XA5 359 aa28.15■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Telo2Q9DC40 840 aaKnown RBP28.15■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Palm3A2TJV2 734 aa28.14■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Zscan18E9PUD6 809 aa28.14■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Sema3eP70275 775 aa28.14■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Tll1Q62381 1013 aa28.14■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Dpp8Q80YA7 892 aa28.14■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Ranbp6Q8BIV3 1105 aa28.14■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Ift74Q8BKE9 600 aa28.14■■■□□ 2.1
Pcf11-205ENSMUST00000208255 Pitpnm2Q6ZPQ6 1335 aa28.14■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Myh14Q6URW6 2000 aa28.13■■■□□ 2.09
Pcf11-205ENSMUST00000208255 D630036H23RikQ3UQD6 204 aa28.13■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Nol12Q8BG17 217 aa28.13■■■□□ 2.09
Pcf11-205ENSMUST00000208255 U2af1l4Q8BGJ9 220 aa28.13■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Spata21Q8BHW6 681 aa28.13■■■□□ 2.09
Pcf11-205ENSMUST00000208255 XdhQ00519 1335 aa28.13■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Qrich1Q3UA37 777 aa28.12■■■□□ 2.09
Pcf11-205ENSMUST00000208255 LrmpQ60664 539 aa28.12■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Usp50Q6P8X6 390 aa28.12■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Ssh1Q76I79 1042 aa28.12■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Ano1Q8BHY3 960 aa28.12■■■□□ 2.09
Pcf11-205ENSMUST00000208255 PdgfdQ925I7 370 aa28.12■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Stxbp2Q64324 593 aa28.12■■■□□ 2.09
Pcf11-205ENSMUST00000208255 Mknk2Q8CDB0 459 aa28.12■■■□□ 2.09
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms