RNA–Protein interactions for RNA: ENSMUST00000168203.1

Ebf3-203, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf3, Length 3,724 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-203ENSMUST00000168203 Cdkl5Q3UTQ8 938 aa13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Ice2Q3UZ18 988 aaKnown RBP13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 MetP16056 1379 aa13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Prr5lA2AVJ5 370 aa13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Pde8bE9Q4S1 865 aa13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Samd15F6XZJ7 620 aa13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 VimP20152 466 aaKnown RBP13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Rfc1P35601 1131 aa13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Exosc10P56960 887 aaKnown RBP13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Snrpa1P57784 255 aaKnown RBP13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Dhx40Q6PE54 779 aaKnown RBP13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Ankrd23Q812A3 306 aa13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Rassf10Q8BL43 508 aa13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Pm20d1Q8C165 503 aa13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Ebag9Q9D0V7 213 aa13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Ccne2Q9Z238 404 aa13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Gm28510A0A087WP28 240 aa13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Dctn1O08788 1281 aa13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 RragbQ6NTA4 374 aa13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Kri1Q8VDQ9 704 aaKnown RBP13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Cep89Q9CZX2 791 aa13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Kcnq5Q9JK45 933 aa13.93□□□□□ -0.18
Ebf3-203ENSMUST00000168203 VeztQ3ZK22 780 aa13.92□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Usp27Q8CEG8 438 aa13.92□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Ltbp4Q8K4G1 1666 aa13.92□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Ugt1a6bK9J7B2 531 aa13.92□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Sf3b2Q3UJB0 878 aaKnown RBP13.92□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Ugt1a6Q64435 531 aa13.92□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Tacc1Q6Y685 774 aa13.92□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Ugt1a7cQ6ZQM8 531 aa13.92□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Hgh1Q8C3I8 393 aa13.92□□□□□ -0.18
Ebf3-203ENSMUST00000168203 SncbQ91ZZ3 133 aa13.92□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Tax1bp1Q3UKC1 814 aaKnown RBP13.92□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Hpcal4Q8BGZ1 191 aa13.92□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Miga2Q8BK03 593 aa13.92□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Kiaa1524Q8BWY9 907 aa13.92□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Pcdhb22Q91XZ8 794 aa13.92□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Ttc14Q9CSP9 761 aa13.92□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Carmil3Q3UFQ8 1375 aa13.91□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Bin2D3Z6Q9 489 aa13.91□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Cnga2Q62398 664 aa13.91□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Krt222Q8CCX5 294 aa13.91□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Osbpl1aQ91XL9 950 aa13.91□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Zbtb43Q9DAI4 467 aa13.91□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Zscan20B2KFW1 1030 aa13.91□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Mdh1P14152 334 aa13.91□□□□□ -0.18
Ebf3-203ENSMUST00000168203 H2afxP27661 143 aaKnown RBP13.91□□□□□ -0.18
Ebf3-203ENSMUST00000168203 NapbP28663 298 aa13.91□□□□□ -0.18
Ebf3-203ENSMUST00000168203 ErmnQ5EBJ4 281 aa13.91□□□□□ -0.18
Ebf3-203ENSMUST00000168203 March6Q6ZQ89 909 aa13.91□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Fbxo3Q9DC63 480 aa13.91□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Ybx3Q9JKB3 361 aaKnown RBP13.91□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Prl7d1P04769 244 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Fkbp1aP26883 108 aaKnown RBP13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Myo1bP46735 1107 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Pla2g4fQ50L41 855 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Cdc37Q61081 379 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 EsrrbQ61539 433 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Ctdspl2Q8BG15 465 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Gpt2Q8BGT5 522 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Map10Q8BJS7 891 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Skor1Q8BX46 964 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 SarnpQ9D1J3 210 aaKnown RBP13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Mast3Q3U214 1321 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Sik3Q6P4S6 1311 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Cyb5rlB1AS42 316 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Eftud2O08810 971 aaKnown RBP13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Sept1P42209 366 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 LbrQ3U9G9 626 aaKnown RBP13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Abtb2Q7TQI7 1024 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Cdc23Q8BGZ4 597 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Foxo4Q9WVH3 505 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Setdb1O88974 1307 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Rad23aP54726 363 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Pald1P70261 859 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Tsga10Q6NY15 697 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 Tmem143Q8VD26 458 aa13.9□□□□□ -0.18
Ebf3-203ENSMUST00000168203 CltaO08585 235 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Irx1P81068 480 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Nlrp2Q4PLS0 1046 aaKnown RBP13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Slc20a2Q80UP8 656 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Ribc1Q9D0B8 379 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Kank3Q9Z1P7 791 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Pcdhb9E9Q5G2 828 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Slc38a10Q5I012 1090 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Spag7Q7TNE3 227 aaKnown RBP13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Lrsam1Q80ZI6 727 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Trim6Q8BGE7 488 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Emilin1Q99K41 1017 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Tsnaxip1Q99P25 704 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Bicdl1A0JNT9 577 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Pde6bP23440 856 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 NntQ61941 1086 aaKnown RBP13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Tbc1d30Q69ZT9 766 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Sptlc3Q8BG54 563 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Rassf2Q8BMS9 326 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Sec62Q8BU14 398 aaKnown RBP13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Lmod1Q8BVA4 595 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Tpcn2Q8BWC0 731 aa13.89□□□□□ -0.19
Ebf3-203ENSMUST00000168203 Fermt3Q8K1B8 665 aa13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms