RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Usp17ldG5E8G2 545 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Usp17lcG5E8I7 545 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Cbx2P30658 519 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Sept2P42208 361 aaKnown RBP16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Ercc3P49135 783 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Irf5P56477 497 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Traf5P70191 558 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Kif20aP97329 887 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Trmt1Q3TX08 663 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Ccdc174Q3U155 467 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Kansl1lQ5DTI6 991 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Tekt3Q6X6Z7 490 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Ube2oQ6ZPJ3 1288 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Otop3Q80UF9 577 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Cnksr2Q80YA9 1032 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Med23Q80YQ2 1367 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Jakmip1Q8BVL9 626 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Syne4Q8CII8 388 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Inpp5bQ8K337 993 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 MsraQ9D6Y7 233 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Akap8Q9DBR0 687 aaKnown RBP16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Efcc1Q9JJF6 558 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Usp14Q9JMA1 493 aaKnown RBP16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Clip2Q9Z0H8 1047 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Klrc1Q9Z202 244 aa16.32■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Tcof1O08784 1320 aaKnown RBP16.31■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Cyp3a59D3Z2W7 503 aa16.31■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Zfp341Q6PGC9 846 aa16.31■□□□□ 0.2
Ercc1-203ENSMUST00000160369 QarsQ8BML9 775 aa16.31■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Arhgef6Q8K4I3 771 aa16.31■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Odf2lQ9D478 642 aa16.31■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Myh14Q6URW6 2000 aa16.31■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Atp8b3Q6UQ17 1335 aa16.3■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Nbr1P97432 988 aa16.3■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Rc3h1Q4VGL6 1130 aaKnown RBP16.3■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Slc44a1Q6X893 653 aa16.3■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Adam39Q7M762 756 aa16.3■□□□□ 0.2
Ercc1-203ENSMUST00000160369 DlatQ8BMF4 642 aa16.3■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Scfd1Q8BRF7 639 aaKnown RBP16.3■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Atf7Q8R0S1 413 aa16.3■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Usp33Q8R5K2 909 aa16.3■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Tdrd1Q99MV1 1172 aa16.3■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Eid1Q9DCR4 169 aa16.3■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Ripk3Q9QZL0 486 aa16.3■□□□□ 0.2
Ercc1-203ENSMUST00000160369 SynrgQ5SV85 1306 aa16.29■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Ccdc183A2AJB1 534 aa16.29■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Mms22lB1AUR6 1238 aa16.29■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Rfpl4bJ3QPR6 266 aa16.29■□□□□ 0.2
Ercc1-203ENSMUST00000160369 NefhP19246 1090 aa16.29■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Fam170aQ66LM6 333 aa16.29■□□□□ 0.2
Ercc1-203ENSMUST00000160369 GorabQ8BRM2 368 aa16.29■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Ttll1Q91V51 423 aa16.29■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Mtmr4Q91XS1 1190 aa16.29■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Btbd19S4R1I0 287 aa16.29■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Irgm2A0A140LIF8 407 aa16.28■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Gm36210A0A1B0GS00 229 aa16.28■□□□□ 0.2
Ercc1-203ENSMUST00000160369 FlgP11088 336 aa16.28■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Tacc1Q6Y685 774 aa16.28■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Gimap3Q99MI6 301 aa16.28■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Fsip1Q9D3V5 435 aa16.28■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Zbtb12Q9Z150 459 aa16.28■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Rexo5D3YW29 759 aa16.27■□□□□ 0.2
Ercc1-203ENSMUST00000160369 SafbD3YXK2 937 aaKnown RBP16.27■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Nkx1-1G3UXB3 402 aa16.27■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Ftl1P29391 183 aa16.27■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Adamts19P59509 1210 aa16.27■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Prr7Q3V0I2 269 aa16.27■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Glra4Q61603 456 aa16.27■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Adgrg6Q6F3F9 1165 aa16.27■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Shisa4Q8CA71 197 aa16.27■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Ccdc158Q8CDI6 1109 aa16.27■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Atad2Q8CDM1 1040 aa16.27■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Vta1Q9CR26 309 aa16.27■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Sil1Q9EPK6 465 aa16.27■□□□□ 0.2
Ercc1-203ENSMUST00000160369 Dock5B2RY04 1868 aa16.27■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Rnf123Q5XPI3 1314 aa16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Oog1E9Q5G7 496 aa16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 B020004C17RikJ3QP07 232 aa16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Lamp1P11438 406 aaKnown RBP16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 ThbdP15306 577 aa16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Usp53P15975 1069 aa16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Ms4a2P20490 235 aa16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Fgfr2P21803 821 aa16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Usp5P56399 858 aaKnown RBP16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Slc16a10Q3U9N9 512 aa16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Swap70Q6A028 585 aaKnown RBP16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Pip5kl1Q6U7H8 395 aa16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Lrrc24Q8BHA1 521 aa16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Rtp1Q8C8C1 263 aa16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Trmt112Q9DCG9 125 aa16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Nudt12Q9DCN1 462 aa16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Psma5Q9Z2U1 241 aaKnown RBP16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Zmym2Q9CU65 1376 aa16.26■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Adgra2Q91ZV8 1336 aa16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Skint7A7XV04 395 aa16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Sema3fO88632 785 aa16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Traf1P39428 409 aa16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 TbcaP48428 108 aaKnown RBP16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Pald1P70261 859 aa16.25■□□□□ 0.19
Ercc1-203ENSMUST00000160369 Cyp4f37Q3V1F1 546 aa16.25■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms