RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 EngaseQ8BX80 734 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Zfp317Q8C0Q5 607 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Cd209bQ8CJ91 325 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 PigbQ9JJQ0 542 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Aox2Q5SGK3 1345 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Cnksr1A2A9K7 700 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Gdap1O88741 358 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Trim56Q80VI1 734 aaKnown RBP13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Pde6cQ91ZQ1 861 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Eid1Q9DCR4 169 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ercc4Q9QZD4 917 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 InsrrQ9WTL4 1300 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Rgs22G3UYX5 1258 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Serpinb1cQ5SV42 375 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Gle1Q8R322 699 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Pcdha12Q91Y18 950 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Bag2Q91YN9 210 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Bmp2kQ91Z96 1138 aa13.01□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Cfap74Q3UY96 1578 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ccdc85cE9Q6B2 420 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Prl3d2F6R3P9 224 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Krt19P19001 403 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Nsrp1Q5NCR9 542 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Recql4Q75NR7 1216 aaKnown RBP13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Krt222Q8CCX5 294 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Bicdl2Q8CHW5 507 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Gkap1Q9JMB0 366 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Uhrf1bp1lA2RSJ4 1457 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ccdc157Q5SPX1 718 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Cyp24a1Q64441 514 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Vat1lQ80TB8 417 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Pcdhb22Q91XZ8 794 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Hdac9Q99N13 588 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Tubb5P99024 444 aaKnown RBP13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Tor4aQ8BH02 426 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Rassf10Q8BL43 508 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Rint1Q8BZ36 792 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Stac3Q8BZ71 360 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Rbm43Q99J64 343 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 AdnpQ9Z103 1108 aaKnown RBP13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Gm28042B7ZCM9 1014 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Rnf40Q3U319 1001 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Anks6Q6GQX6 883 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Bend3Q6PAL0 825 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Herc4Q6PAV2 1057 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Pm20d1Q8C165 503 aa13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Nop56Q9D6Z1 580 aaKnown RBP13□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Cnbd1B1AWM0 430 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Gm20425E9Q035 978 aaKnown RBP12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 SrprbP47758 269 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 NpeppsQ11011 920 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ankk1Q8BZ25 745 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Pdlim2Q8R1G6 349 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Osbpl1aQ91XL9 950 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 KynuQ9CXF0 464 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Myo1cQ9WTI7 1063 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Cpsf2O35218 782 aaKnown RBP12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Mx1P09922 631 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ift20Q61025 132 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Depdc1bQ8BH88 529 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Yars2Q8BYL4 472 aaKnown RBP12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 LpxnQ99N69 386 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Efcc1Q9JJF6 558 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Map7d1A2AJI0 846 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 SpopQ6ZWS8 374 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Bsdc1Q80Y55 427 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 D130040H23RikQ8BII3 405 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Hexim1Q8R409 356 aaKnown RBP12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Kif17Q99PW8 1038 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Cbx6Q9DBY5 414 aa12.99□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ftl2P49945 183 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Kiaa1024Q8K3V7 917 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Atp1a1Q8VDN2 1023 aaKnown RBP12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ttc14Q9CSP9 761 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Cfap65Q3V0B4 1847 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 1700006A11RikB9EHI3 544 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Lipo1J3QME6 396 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Krt8P11679 490 aaKnown RBP12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ctnna1P26231 906 aaKnown RBP12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Neurog2P70447 263 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Gbp1Q01514 589 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Cdc23Q8BGZ4 597 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Calcoco1Q8CGU1 691 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 SltmQ8CH25 1031 aaKnown RBP12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Gbp7Q91Z40 638 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 MycbpQ9EQS3 103 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Peg3Q3URU2 1571 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Rasal2E9PW37 1286 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Cetn1P41209 172 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Lins1Q3U1D0 764 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ap5z1Q3U829 807 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Kcna6Q61923 529 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Trim28Q62318 834 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Bola3Q8CEI1 110 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Kansl3A2RSY1 903 aaKnown RBP12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ms4a1P19437 291 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Exoc3Q6KAR6 755 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Kcnf1Q7TSH7 493 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Rassf6Q80UQ2 353 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Traf3ip3Q8C0G2 513 aa12.98□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms