RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 Anapc15-psA0A140T8L6 141 aa16.68■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 MccE9PWI3 1003 aa16.68■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Cntnap3E9PY62 1287 aa16.68■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Gm44503E9PYU5 387 aa16.68■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Sema3fO88632 785 aa16.68■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Cd3dP04235 173 aa16.68■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Tnni2P13412 182 aa16.68■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Acsl1P41216 699 aa16.68■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Sept2P42208 361 aaKnown RBP16.68■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Sema3eP70275 775 aa16.68■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Trmt1Q3TX08 663 aa16.68■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Dpp8Q80YA7 892 aa16.68■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Dnaaf4Q8R368 420 aa16.68■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Styxl1Q9DAR2 321 aa16.68■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Ak2Q9WTP6 239 aa16.68■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Frmpd4A2AFR3 1320 aa16.68■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Arl14Q3SXC5 192 aa16.67■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Ifit2Q64112 472 aa16.67■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Rbm28Q8CGC6 750 aaKnown RBP16.67■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Vmn1r199Q8R280 367 aa16.67■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Rfc4Q99J62 364 aa16.67■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Cacna1fQ9JIS7 1985 aa16.67■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Col11a1Q61245 1804 aa16.67■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Tcof1O08784 1320 aaKnown RBP16.67■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Rbm8a2A0A0N4SUH6 174 aa16.66■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 A0A1W2P6Q8 802 aa16.66■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Gm9048A0A1W2P7H4 802 aa16.66■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 A0A1W2P7Z8 802 aa16.66■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Gm9046A0A1W2P855 802 aa16.66■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Armc3A2AU72 881 aa16.66■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 SafbD3YXK2 937 aaKnown RBP16.66■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Eya3P97480 510 aa16.66■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Scfd2Q8BTY8 684 aa16.66■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 OplahQ8K010 1288 aa16.66■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Rbm8aQ9CWZ3 174 aa16.66■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 MsraQ9D6Y7 233 aa16.66■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 SynrgQ5SV85 1306 aa16.66■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Casp12O08736 419 aa16.65■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Ptpn12P35831 775 aa16.65■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Mybl2P48972 704 aa16.65■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 RubcnlQ3TD16 648 aa16.65■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Sv2cQ69ZS6 727 aa16.65■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Syne4Q8CII8 388 aa16.65■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Myh14Q6URW6 2000 aa16.65■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Usp31E9Q6Y8 1344 aa16.65■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Adgra2Q91ZV8 1336 aa16.65■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Lamb1P02469 1786 aa16.65■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Slc1a4O35874 532 aa16.64■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Usp53P15975 1069 aa16.64■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Ccnd3P30282 292 aa16.64■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Kif20aP97329 887 aa16.64■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Cyp4f37Q3V1F1 546 aa16.64■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Clul1Q3ZRW6 464 aa16.64■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Kansl1lQ5DTI6 991 aa16.64■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Spty2d1Q68FG3 682 aa16.64■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Cnot6lQ8VEG6 555 aa16.64■□□□□ 0.26
Ccdc171-204ENSMUST00000126429 Btn2a2A4QPC6 514 aa16.64■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Mms22lB1AUR6 1238 aa16.64■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Ftl1P29391 183 aa16.64■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Grm1P97772 1199 aa16.64■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Zbtb39Q6PDK0 712 aa16.64■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Htatsf1Q8BGC0 757 aa16.64■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Tshz3Q8CGV9 1081 aa16.64■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Nup133Q8R0G9 1155 aa16.64■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Bub1bQ9Z1S0 1052 aa16.64■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Usp42B2RQC2 1324 aaKnown RBP16.63■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Cyp3a59D3Z2W7 503 aa16.63■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Eps15P42567 897 aa16.63■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Zfp341Q6PGC9 846 aa16.63■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Ift74Q8BKE9 600 aa16.63■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 ImmtQ8CAQ8 757 aaKnown RBP16.63■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Rad50P70388 1312 aa16.62■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Nmt2O70311 529 aa16.62■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 FlgP11088 336 aa16.62■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Fgfr2P21803 821 aa16.62■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Ccdc84Q4VA36 332 aaKnown RBP16.62■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Wdr43Q6ZQL4 677 aaKnown RBP16.62■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 PpatQ8CIH9 517 aa16.62■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Rassf8Q8CJ96 419 aa16.62■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Usp33Q8R5K2 909 aa16.62■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Zmym2Q9CU65 1376 aa16.61■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Ms4a2P20490 235 aa16.61■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Eme2Q56A04 373 aa16.61■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Cep131Q62036 1060 aa16.61■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Mbtps2Q8CHX6 515 aa16.61■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Champ1Q8K327 802 aaKnown RBP16.61■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Akap8Q9DBR0 687 aaKnown RBP16.61■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Sil1Q9EPK6 465 aa16.61■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Znf287Q9EQB9 759 aa16.61■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 FAM186AQ9D9R9 1790 aa16.61■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Cyp2d34L7N463 504 aa16.6■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Ccdc174Q3U155 467 aa16.6■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Olfm4Q3UZZ4 505 aa16.6■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 WaplQ65Z40 1200 aaKnown RBP16.6■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Ppp1r26Q6A025 1163 aa16.6■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Dcaf15Q6PFH3 600 aa16.6■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Ppip5k2Q6ZQB6 1129 aa16.6■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Rnf41Q8BH75 317 aa16.6■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Bri3bpQ8BXV2 253 aa16.6■□□□□ 0.25
Ccdc171-204ENSMUST00000126429 Mtmr4Q91XS1 1190 aa16.6■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms