RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Rad50P70388 1312 aa14.66□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Sbf1Q6ZPE2 1867 aa14.66□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Lamb1P02469 1786 aa14.66□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Cyp2d10P24456 504 aa14.66□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Nf2P46662 596 aa14.66□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 MyrflQ3UN70 904 aa14.66□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Bri3bpQ8BXV2 253 aa14.66□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Cdk8Q8R3L8 464 aa14.66□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Bmp2kQ91Z96 1138 aa14.66□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Cyp46a1Q9WVK8 500 aa14.66□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Rlbp1Q9Z275 317 aa14.66□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 A0A1W2P6Q8 802 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Gm9048A0A1W2P7H4 802 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 A0A1W2P7Z8 802 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Gm9046A0A1W2P855 802 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Magea4F2Z493 315 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Sept2P42208 361 aaKnown RBP14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Atp9bP98195 1146 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 PrkczQ02956 592 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 YdjcQ14BV6 310 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Znf667Q2TL60 609 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Ehmt1Q5DW34 1296 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Rgl2Q61193 778 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 HelbQ6NVF4 1074 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Recql4Q75NR7 1216 aaKnown RBP14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Ubap2lQ80X50 1107 aaKnown RBP14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Ces1dQ8VCT4 565 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Fubp1Q91WJ8 651 aaKnown RBP14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Rbm43Q99J64 343 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Bcar3Q9QZK2 820 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 SmapQ9R0P4 181 aaKnown RBP14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Mbd3Q9Z2D8 285 aaKnown RBP14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Kiaa0100Q5SYL3 2234 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 Disp2Q8CIP5 1345 aa14.65□□□□□ -0.06
Ccdc28b-202ENSMUST00000106035 DaxxO35613 739 aa14.64□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 LifrP42703 1092 aa14.64□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Ptpdc1Q6NZK8 747 aa14.64□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Ttll4Q80UG8 1193 aa14.64□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Prkag2Q91WG5 566 aa14.64□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Dynll2Q9D0M5 89 aa14.64□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Gcc1Q9D4H2 778 aa14.64□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Ano3A2AHL1 981 aa14.63□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Gjd2O54851 321 aa14.63□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Igfbp4P47879 254 aa14.63□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Hs1bp3Q3TC93 395 aa14.63□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Btg1-ps1Q3V0S2 161 aa14.63□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Btg1-ps2Q3V0X0 161 aa14.63□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Ccdc84Q4VA36 332 aaKnown RBP14.63□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Ift74Q8BKE9 600 aa14.63□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Brf1Q8CFK2 676 aa14.63□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Tbc1d7Q9D0K0 293 aa14.63□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Phldb3E9QAF4 648 aa14.62□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Hoxc10P31257 342 aa14.62□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Rnf157Q3TEL6 685 aa14.62□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Aak1Q3UHJ0 959 aa14.62□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Ccdc27Q3V036 639 aa14.62□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Pde3bQ61409 1100 aa14.62□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Trim56Q80VI1 734 aaKnown RBP14.62□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Aoc2Q812C9 757 aa14.62□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Lrch3Q8BVU0 778 aa14.62□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Bap1Q99PU7 728 aa14.62□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Znf287Q9EQB9 759 aa14.62□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 PfkpQ9WUA3 784 aaKnown RBP14.62□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Dennd3A2RT67 1274 aa14.61□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 MccE9PWI3 1003 aa14.61□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Gml2G5E8L7 176 aa14.61□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Sema3fO88632 785 aa14.61□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Cyp2c37P56654 490 aa14.61□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Spata5Q3UMC0 893 aaKnown RBP14.61□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 SkilQ60665 675 aa14.61□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Cyp2c54Q6XVG2 490 aa14.61□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Supt20hQ7TT00 530 aaKnown RBP14.61□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Dpp8Q80YA7 892 aa14.61□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Entpd3Q8BFW6 529 aa14.61□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Slc18a1Q8R090 521 aa14.61□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 IrgqQ8VIM9 583 aa14.61□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Cyp2c50Q91X77 490 aa14.61□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Tfip11Q9ERA6 838 aaKnown RBP14.61□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Dclk1Q9JLM8 756 aa14.61□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Skint3A7TZF0 458 aa14.6□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 WaplQ65Z40 1200 aaKnown RBP14.6□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Olfr118Q7TRJ6 321 aa14.6□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Prpf40bQ80W14 870 aa14.6□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Alx1Q8C8B0 326 aa14.6□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Bclaf1Q8K019 919 aaKnown RBP14.6□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Defb15Q8R2I5 79 aa14.6□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Adam1bQ8R534 806 aa14.6□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Ndufv1Q91YT0 464 aa14.6□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Pdcd6ipQ9WU78 869 aaKnown RBP14.6□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Fzd1O70421 642 aa14.59□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Mcm2P97310 904 aa14.59□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 B230104I21RikQ3USW4 141 aa14.59□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Cgnl1Q6AW69 1298 aa14.59□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Mettl16Q9CQG2 553 aaKnown RBP14.59□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Prkab1Q9R078 270 aa14.59□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Kntc1Q8C3Y4 2207 aa14.58□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Znf638Q61464 1960 aaKnown RBP14.58□□□□□ -0.07
Ccdc28b-202ENSMUST00000106035 Celf5D3Z4T1 395 aaKnown RBP14.58□□□□□ -0.08
Ccdc28b-202ENSMUST00000106035 Ccdc146E9Q9F7 977 aa14.58□□□□□ -0.08
Ccdc28b-202ENSMUST00000106035 Tmigd3G3X8R9 209 aa14.58□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms