RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Trim25Q61510 634 aaKnown RBP14.03□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Golph3lQ8R088 285 aaKnown RBP14.03□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Znf638Q61464 1960 aaKnown RBP14.03□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Calcoco2A2A6M5 331 aa14.02□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Slu7Q8BHJ9 585 aa14.02□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Rtn1Q8K0T0 780 aa14.02□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Ubxn4Q8VCH8 506 aa14.02□□□□□ -0.16
Vamp1-203ENSMUST00000100942 NsmfQ99NF2 532 aa14.02□□□□□ -0.16
Vamp1-203ENSMUST00000100942 NenfQ9CQ45 171 aa14.02□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Dydc2Q9D3X8 139 aa14.02□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Mei1Q9D4I2 1268 aa14.02□□□□□ -0.16
Vamp1-203ENSMUST00000100942 Pet2A2AHY8 747 aa14.02□□□□□ -0.17
Vamp1-203ENSMUST00000100942 NfixP70257 488 aa14.02□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Mcm6P97311 821 aa14.02□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Cdcp1Q5U462 833 aa14.02□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Vps37dQ810I0 261 aa14.02□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Slfn1Q9Z0I7 337 aa14.02□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Gm43638A0A0J9YU36 694 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Actn3O88990 900 aaKnown RBP14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Ttll12Q3UDE2 639 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 AcrbpQ3V140 540 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Rbm26Q6NZN0 1012 aaKnown RBP14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Cypt2Q6P924 180 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Tsen34Q8BMZ5 316 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Vps18Q8R307 973 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Ces1hD3Z298 562 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Abl1P00520 1123 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Cplx1P63040 134 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Nbr1P97432 988 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Tpm4Q6IRU2 248 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Ankrd13dQ6PD24 605 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Pnpla2Q8BJ56 486 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Zc3h6Q8BYK8 1177 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Ints4Q8CIM8 964 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Kcnk13Q8R1P5 405 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Znf568E9PYI1 671 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Magi2Q9WVQ1 1275 aa14.01□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Esyt2Q3TZZ7 845 aa14□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Ehmt1Q5DW34 1296 aa14□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Trak2Q6P9N8 913 aa14□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Pus7lQ8CE46 702 aa14□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Chd5A2A8L1 1946 aa14□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Anks1aP59672 1150 aa14□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Ccdc51Q3URS9 406 aa14□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Zkscan4Q5SZT6 480 aa14□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Wasf1Q8R5H6 559 aa14□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Stk39Q9Z1W9 556 aa14□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Stx1aO35526 288 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Mns1Q61884 491 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Fchsd1Q6PFY1 688 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 QarsQ8BML9 775 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Strip1Q8C079 837 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Kcnj14Q8JZN3 434 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Rbm5Q91YE7 815 aaKnown RBP13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 RarsQ9D0I9 660 aaKnown RBP13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Tubb4aQ9D6F9 444 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Ccdc121E9Q6D3 323 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Ell2Q3UKU1 639 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Mum1l1Q4VA55 681 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Adck5Q80V03 582 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Larp6Q8BN59 492 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Akt1s1Q9D1F4 257 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Ccdc39Q9D5Y1 937 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Cwc15Q9JHS9 229 aaKnown RBP13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Acot9Q9R0X4 439 aaKnown RBP13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Pfkfb1P70266 471 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Pcdhb14Q6PB90 796 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Ano10Q8BH79 659 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Uba5Q8VE47 403 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Zranb2Q9R020 330 aaKnown RBP13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Epb41l3Q9WV92 929 aa13.99□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Spg7Q3ULF4 781 aa13.98□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Tbc1d5Q80XQ2 815 aa13.98□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Nop2Q922K7 793 aaKnown RBP13.98□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Etnk1Q9D4V0 363 aa13.98□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Tbc1d8bA3KGB4 1114 aa13.98□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Prr16A3KMN5 304 aa13.98□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Rfc1P35601 1131 aa13.98□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Gas1Q01721 343 aa13.98□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Panx2Q6IMP4 677 aa13.98□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Mei4Q8BRM6 389 aa13.98□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Tmx4Q8C0L0 335 aa13.98□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Zfp202Q8C879 641 aa13.98□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Sumf1Q8R0F3 372 aa13.98□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Mrpl12Q9DB15 201 aaKnown RBP13.98□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Ktn1Q61595 1327 aaKnown RBP13.98□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Map9Q3TRR0 646 aa13.97□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Ttll4Q80UG8 1193 aa13.97□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Evc2Q8K1G2 1220 aa13.97□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Q8K2W9 541 aa13.97□□□□□ -0.17
Vamp1-203ENSMUST00000100942 CpzQ8R4V4 654 aa13.97□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Gm3893E9Q1I1 302 aa13.97□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Nmt2O70311 529 aa13.97□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Bend4P86174 541 aa13.97□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Dhx40Q6PE54 779 aaKnown RBP13.97□□□□□ -0.17
Vamp1-203ENSMUST00000100942 IqcgQ80W32 419 aa13.97□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Cep89Q9CZX2 791 aa13.97□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Jakmip2D3YXK0 820 aa13.96□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Chrm1P12657 460 aa13.96□□□□□ -0.17
Vamp1-203ENSMUST00000100942 Psd3Q2PFD7 1037 aa13.96□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms