RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Mrpl44Q9CY73 333 aaKnown RBP26.41■■□□□ 1.82
Scn1b-201ENSMUST00000098548 Myh14Q6URW6 2000 aa26.4■■□□□ 1.82
Scn1b-201ENSMUST00000098548 Cacna1fQ9JIS7 1985 aa26.4■■□□□ 1.82
Scn1b-201ENSMUST00000098548 Atrnl1Q6A051 1378 aa26.4■■□□□ 1.82
Scn1b-201ENSMUST00000098548 Znf697Q569E7 569 aa26.4■■□□□ 1.82
Scn1b-201ENSMUST00000098548 Abhd15Q5F2F2 459 aa26.4■■□□□ 1.82
Scn1b-201ENSMUST00000098548 Mapk4Q6P5G0 583 aa26.4■■□□□ 1.82
Scn1b-201ENSMUST00000098548 Epc2Q8C0I4 808 aa26.4■■□□□ 1.82
Scn1b-201ENSMUST00000098548 Paf1Q8K2T8 535 aa26.4■■□□□ 1.82
Scn1b-201ENSMUST00000098548 Tcof1O08784 1320 aaKnown RBP26.39■■□□□ 1.82
Scn1b-201ENSMUST00000098548 Ncf1Q09014 390 aa26.39■■□□□ 1.82
Scn1b-201ENSMUST00000098548 Leo1Q5XJE5 667 aa26.39■■□□□ 1.82
Scn1b-201ENSMUST00000098548 Akap4Q60662 849 aa26.39■■□□□ 1.82
Scn1b-201ENSMUST00000098548 Dock5B2RY04 1868 aa26.38■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Prkg1P0C605 671 aa26.38■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Cplx2P84086 134 aa26.38■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Ctdnep1Q3TP92 244 aa26.38■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Ccdc174Q3U155 467 aa26.38■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Lipo1J3QME6 396 aa26.37■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Cdkl5Q3UTQ8 938 aa26.37■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Igbp1bQ9QZ29 343 aa26.37■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Prdm1Q60636 856 aa26.37■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Tll1Q62381 1013 aa26.37■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Tmx3Q8BXZ1 456 aa26.37■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Tsr2Q8C8T8 191 aa26.37■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Aldh1b1Q9CZS1 519 aa26.37■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Cry2Q9R194 592 aa26.37■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Rc3h1Q4VGL6 1130 aaKnown RBP26.36■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Nlgn2Q69ZK9 836 aa26.36■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Nup133Q8R0G9 1155 aa26.36■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Slc1a4O35874 532 aa26.35■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Cep131Q62036 1060 aa26.35■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Phf20Q8BLG0 1010 aaKnown RBP26.35■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Me3Q8BMF3 604 aa26.35■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Kif4P33174 1231 aa26.34■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Fam122aQ9DB52 284 aa26.34■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Zcchc17Q9ESX4 241 aaKnown RBP26.34■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Fam205a1D3YZF6 1314 aa26.34■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Usp53P15975 1069 aa26.33■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Ube2hP62257 183 aa26.33■■□□□ 1.81
Scn1b-201ENSMUST00000098548 MyrflQ3UN70 904 aa26.33■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Stxbp2Q64324 593 aa26.33■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Tpcn2Q8BWC0 731 aa26.33■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Trim59Q922Y2 403 aa26.33■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Telo2Q9DC40 840 aaKnown RBP26.33■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Tmod2Q9JKK7 351 aa26.33■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Mad1l1Q9WTX8 717 aaKnown RBP26.33■■□□□ 1.81
Scn1b-201ENSMUST00000098548 Nmt2O70311 529 aa26.33■■□□□ 1.8
Scn1b-201ENSMUST00000098548 MycnP03966 462 aaKnown RBP26.33■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Ptpn12P35831 775 aa26.33■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Bace1P56818 501 aa26.33■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Ttll12Q3UDE2 639 aa26.33■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Dpp8Q80YA7 892 aa26.33■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Ano1Q8BHY3 960 aa26.33■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Med4Q9CQA5 270 aa26.33■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Me1P06801 572 aa26.32■■□□□ 1.8
Scn1b-201ENSMUST00000098548 L1camP11627 1260 aa26.32■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Ftl1P29391 183 aa26.32■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Eif5P59325 429 aaKnown RBP26.32■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Cct2P80314 535 aaKnown RBP26.32■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Ccdc66Q6NS45 935 aa26.32■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Ube2oQ6ZPJ3 1288 aa26.32■■□□□ 1.8
Scn1b-201ENSMUST00000098548 GrapQ9CX99 217 aa26.32■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Eya3P97480 510 aa26.31■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Scnn1aQ61180 699 aa26.31■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Znf219Q6IQX8 726 aa26.31■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Srgap1Q91Z69 1062 aa26.31■■□□□ 1.8
Scn1b-201ENSMUST00000098548 XdhQ00519 1335 aa26.31■■□□□ 1.8
Scn1b-201ENSMUST00000098548 LyarQ08288 388 aaKnown RBP26.3■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Slc10a4Q3UEZ8 437 aa26.3■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Brip1Q5SXJ3 1174 aa26.3■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Srek1Q8BZX4 494 aaKnown RBP26.3■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Phf20l1Q8CCJ9 1013 aa26.3■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Ccdc178Q8CDV0 866 aa26.3■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Pde6aP27664 859 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Yy1Q00899 414 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 D630036H23RikQ3UQD6 204 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Myl10Q62082 202 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Mknk2Q8CDB0 459 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Calhm4Q8CE93 315 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Snapc2Q91XA5 359 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Cdc45Q9Z1X9 566 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Cfap99A0A140LIX9 648 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Pagr1bF6V0H0 108 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Metap2O08663 478 aaKnown RBP26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Cxcl9P18340 126 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Qrich1Q3UA37 777 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Ankrd13cQ3UX43 541 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Ppp2r5bQ6PD28 497 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Slc9c1Q6UJY2 1175 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Nol12Q8BG17 217 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 QarsQ8BML9 775 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 C8aQ8K182 587 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Inpp5bQ8K337 993 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Apbb1ipQ8R5A3 670 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Pagr1aQ99L02 253 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Plagl1Q9JLQ4 704 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Krt85Q9Z2T6 507 aa26.29■■□□□ 1.8
Scn1b-201ENSMUST00000098548 Col2a1P28481 1487 aa26.28■■□□□ 1.8
Scn1b-201ENSMUST00000098548 A0A1W2P6Q8 802 aa26.28■■□□□ 1.8
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms