RNA–Protein interactions for RNA: ENSMUST00000096386.12

Rnf41-201, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-201ENSMUST00000096386 Trpa1Q8BLA8 1125 aa12.13□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Srgap2Q91Z67 1071 aa12.13□□□□□ -0.47
Rnf41-201ENSMUST00000096386 BrapQ99MP8 591 aa12.13□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Uts2Q9QZQ3 123 aa12.13□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Abcc4E9Q236 1325 aa12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Igsf1Q7TQA1 1317 aa12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Tpm3-rs7D3Z2H9 248 aa12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Trove2O08848 538 aa12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Brinp3Q499E0 766 aa12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Tmem232Q5K6N0 675 aa12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Specc1Q5SXY1 1067 aa12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Irak1Q62406 710 aa12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Dnajc28Q8VCE1 385 aa12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Terf2ipQ91VL8 393 aa12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Bzw1Q9CQC6 419 aaKnown RBP12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Slit3Q9WVB4 1523 aa12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 FscbA1EGX6 1074 aa12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Tom1O88746 492 aa12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Ankib1Q6ZPS6 1085 aa12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Enox1Q8BHR2 643 aaKnown RBP12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Q8C5K5 320 aa12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Zc3h13E9Q784 1729 aaKnown RBP12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Setdb1O88974 1307 aa12.12□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Gm5814J3QP80 125 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 IkbkbO88351 757 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Lrrc4bP0C192 709 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Skap2Q3UND0 358 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Srrm3Q80WV7 648 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Dnm1lQ8K1M6 742 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 SdsQ8VBT2 327 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Mrfap1Q9CQL7 125 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Cep72Q9D3R3 646 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Psmd14O35593 310 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Sox5P35710 763 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Pth1rP41593 591 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 GnpatP98192 678 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Trpc6Q61143 930 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Utp14bQ6EJB6 756 aaKnown RBP12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Wdr35Q8BND3 1181 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 4933428M09RikQ9D3X3 192 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 SelenooQ9DBC0 667 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 PhaxQ9JJT9 385 aaKnown RBP12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Rabgef1Q9JM13 491 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Lmtk3Q5XJV6 1424 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Prdm2A2A7B5 1709 aaKnown RBP12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Etnk2A7MCT6 385 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Pkn1P70268 946 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Fam71bQ5STT6 665 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Hook2Q7TMK6 716 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Luc7l2Q7TNC4 392 aaKnown RBP12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Cwf19l1Q8CI33 537 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Lrrc45Q8CIM1 670 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 GgcxQ9QYC7 757 aa12.11□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Map7d1A2AJI0 846 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Cyp26c1B2RXA7 518 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Itga9B8JK39 1036 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Myo1eE9Q634 1107 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Ebf2O08792 575 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Adssl1P28650 457 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Pdrg1P59048 133 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 SfswapQ3USH5 945 aaKnown RBP12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 WlsQ6DID7 541 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Gigyf2Q6Y7W8 1291 aaKnown RBP12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Cep104Q80V31 926 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Tubgcp2Q921G8 905 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Tbc1d7Q9D0K0 293 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Diaph2O70566 1098 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Nek1P51954 1203 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Casp4P70343 373 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Slc7a1Q09143 622 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Cracr2aQ3UP38 310 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Arhgap44Q5SSM3 814 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Stkld1Q80YS9 662 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 D130040H23RikQ8BII3 405 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Fam217aQ9D9W6 419 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Baiap2l1Q9DBJ3 514 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Peg12Q9WVA7 283 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Pde3aQ9Z0X4 1141 aa12.1□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Gm28510A0A087WP28 240 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Ccng2O08918 344 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Eif4a2P10630 407 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Klrb1Q0ZUP1 214 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 CtcfQ61164 736 aaKnown RBP12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Ddx3xQ62167 662 aaKnown RBP12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Papd7Q6PB75 542 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Gpcpd1Q8C0L9 675 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Vps53Q8CCB4 832 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Pms1Q8K119 917 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Dhx58Q99J87 678 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Atp8b5A3FIN4 1183 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Scgb2b19J3QM75 112 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Pbx1P41778 430 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Epha2Q03145 977 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Trim80Q3V061 624 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Cyfip2Q5SQX6 1253 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Adam1aQ60813 791 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Prpf4bQ61136 1007 aaKnown RBP12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Krt42Q6IFX2 452 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Prpf40bQ80W14 870 aa12.09□□□□□ -0.47
Rnf41-201ENSMUST00000096386 Usp20Q8C6M1 916 aa12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms