RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Sall1Q9ER74 1322 aa10.19□□□□□ -0.78
Scn8a-202ENSMUST00000096198 B020004C17RikJ3QP07 232 aa10.19□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Apaf1O88879 1249 aa10.19□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Inpp5jP59644 1003 aa10.19□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Fam83hQ148V8 1209 aa10.19□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Q3TQI7 289 aaKnown RBP10.19□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Pramel7Q810Y8 479 aa10.19□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Gys1Q9Z1E4 738 aaKnown RBP10.19□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Myh13B1AR69 1938 aa10.19□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Bin2D3Z6Q9 489 aa10.18□□□□□ -0.78
Scn8a-202ENSMUST00000096198 PtpreP49446 699 aa10.18□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Lamc2Q61092 1191 aa10.18□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Calhm4Q8CE93 315 aa10.18□□□□□ -0.78
Scn8a-202ENSMUST00000096198 DutQ8VCG1 200 aaKnown RBP10.18□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Trmt44Q9D2Q2 713 aa10.18□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Cacna1gQ5SUF7 2381 aa10.17□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Med23Q80YQ2 1367 aa10.17□□□□□ -0.78
Scn8a-202ENSMUST00000096198 BC025446A0A087WQT1 134 aa10.17□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Cyp2d11P24457 504 aa10.17□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Rhbdl3P58873 404 aa10.17□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Bahd1Q497V6 772 aa10.17□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Irf9Q61179 399 aa10.17□□□□□ -0.78
Scn8a-202ENSMUST00000096198 U2surpQ6NV83 1029 aaKnown RBP10.17□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Ankrd13aQ80UP5 588 aa10.17□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Adgra1Q8C4G9 578 aa10.17□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Asb2Q8K0L0 634 aa10.17□□□□□ -0.78
Scn8a-202ENSMUST00000096198 ParnQ8VDG3 624 aa10.17□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Alpk1Q9CXB8 1231 aa10.17□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Myh15E9Q264 1925 aa10.17□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Mia3Q8BI84 1930 aa10.17□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Ltbp2O08999 1813 aa10.17□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Myh4Q5SX39 1939 aa10.16□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Prr22F6TNE3 422 aa10.16□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Has3O08650 554 aa10.16□□□□□ -0.78
Scn8a-202ENSMUST00000096198 VcpQ01853 806 aaKnown RBP10.16□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Cep126Q0VBV7 1103 aa10.16□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Lins1Q3U1D0 764 aa10.16□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Fam196aQ3USH1 422 aa10.16□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Fsd1Q7TPM6 496 aa10.16□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Osbpl2Q8BX94 484 aa10.16□□□□□ -0.78
Scn8a-202ENSMUST00000096198 CenpsQ9D084 142 aa10.16□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Stard3nlQ9DCI3 235 aa10.16□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Nfe2l3Q9WTM4 660 aa10.16□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Atp1a4Q9WV27 1032 aa10.16□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Letm1Q9Z2I0 738 aa10.16□□□□□ -0.78
Scn8a-202ENSMUST00000096198 TriobpQ99KW3 2014 aa10.16□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Man1b1A2AJ15 658 aa10.15□□□□□ -0.78
Scn8a-202ENSMUST00000096198 1700003F12RikA2AKE5 210 aa10.15□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Gml2G5E8L7 176 aa10.15□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Gjd2O54851 321 aa10.15□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Sept4P28661 478 aa10.15□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Plcb3P51432 1234 aaKnown RBP10.15□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Entpd7Q3TCT4 606 aa10.15□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Slc38a10Q5I012 1090 aa10.15□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Prpf38bQ80SY5 542 aaKnown RBP10.15□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Pum1Q80U78 1189 aaKnown RBP10.15□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Stag1Q9D3E6 1258 aa10.15□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Ttc9bQ9D6E4 239 aa10.15□□□□□ -0.78
Scn8a-202ENSMUST00000096198 MgaA2AWL7 3003 aaKnown RBP10.15□□□□□ -0.78
Scn8a-202ENSMUST00000096198 Usp24B1AY13 2617 aaKnown RBP10.15□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Mast3Q3U214 1321 aa10.14□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Col5a3Q9JLI2 1739 aa10.14□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Gm16427J3QN52 483 aa10.14□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Guca2bO09051 106 aa10.14□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Rnf19aP50636 840 aa10.14□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Tbc1d9bQ5SVR0 1263 aa10.14□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Cnksr3Q8BMA3 555 aa10.14□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Ttc8Q8VD72 515 aa10.14□□□□□ -0.79
Scn8a-202ENSMUST00000096198 DaglbQ91WC9 669 aa10.14□□□□□ -0.79
Scn8a-202ENSMUST00000096198 VillQ91YD6 859 aa10.14□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Nkx2-4Q9EQM3 354 aa10.14□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Ehd4Q9EQP2 541 aa10.14□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Ulk2Q9QY01 1037 aa10.14□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Srpk3Q9Z0G2 565 aa10.14□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Gcn1E9PVA8 2671 aaKnown RBP10.13□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Angpt1O08538 498 aa10.13□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Axin1O35625 863 aa10.13□□□□□ -0.79
Scn8a-202ENSMUST00000096198 mt-Co3P00416 261 aa10.13□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Cyp21P03940 487 aa10.13□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Adssl1P28650 457 aa10.13□□□□□ -0.79
Scn8a-202ENSMUST00000096198 March9Q3TZ87 348 aa10.13□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Sept9Q80UG5 583 aa10.13□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Arl14epQ8BIX3 276 aa10.13□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Ppm1mQ8BU27 406 aa10.13□□□□□ -0.79
Scn8a-202ENSMUST00000096198 IrgqQ8VIM9 583 aa10.13□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Mdm1Q9D067 708 aa10.13□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Wdfy3Q6VNB8 3508 aa10.13□□□□□ -0.79
Scn8a-202ENSMUST00000096198 3110082J24RikF6Z6Z2 108 aa10.12□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Fcgr2P08101 330 aa10.12□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Pgk2P09041 417 aa10.12□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Mfsd14aP70187 490 aa10.12□□□□□ -0.79
Scn8a-202ENSMUST00000096198 NfiaQ02780 532 aa10.12□□□□□ -0.79
Scn8a-202ENSMUST00000096198 DhpsQ3TXU5 369 aa10.12□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Tbc1d2bQ3U0J8 965 aa10.12□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Tigd5Q499M4 642 aa10.12□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Map3k2Q61083 619 aa10.12□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Slc9a7Q8BLV3 726 aa10.12□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Bri3bpQ8BXV2 253 aa10.12□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Calhm6Q8C9E8 313 aa10.12□□□□□ -0.79
Scn8a-202ENSMUST00000096198 Wipf1Q8K1I7 493 aa10.12□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms