RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Gm9048A0A1W2P7H4 802 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 A0A1W2P7S8 802 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 A0A1W2P7Z8 802 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Gm9046A0A1W2P855 802 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Dennd3A2RT67 1274 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Dact3Q0PHV7 610 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Cdc5lQ6A068 802 aaKnown RBP11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Clic4Q9QYB1 253 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Igf2bp2Q5SF07 592 aaKnown RBP11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Epn1Q80VP1 575 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Hpcal4Q8BGZ1 191 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ankk1Q8BZ25 745 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 9230110C19RikQ8CC70 267 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Hdac9Q99N13 588 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Cyp2j7A0A140T8U1 504 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Slc4a4O88343 1079 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ddit3P35639 168 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Rbm17Q8JZX4 405 aaKnown RBP11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Atg3Q9CPX6 314 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Zcchc8Q9CYA6 709 aaKnown RBP11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 PtprtQ99M80 1454 aa11.36□□□□□ -0.59
Lig4-201ENSMUST00000095476 Spocd1B1ASB6 936 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Atp2a2O55143 1044 aaKnown RBP11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Coro7Q9D2V7 922 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Pbrm1Q8BSQ9 1634 aaKnown RBP11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Mapkbp1Q6NS57 1503 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ift81O35594 676 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Abcb4P21440 1276 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 SpertQ32MG2 446 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Rapgef1Q3UHC1 1224 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ppp2r5eQ61151 467 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Npdc1Q64322 332 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Retreg2Q6NS82 541 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Rcn2Q8BP92 320 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Taco1Q8K0Z7 294 aaKnown RBP11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 GckrQ91X44 587 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Spc24Q9D083 201 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Taf7Q9R1C0 341 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 RragaQ80X95 313 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Depdc1bQ8BH88 529 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Lrrd1Q8C0R9 853 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 HscbQ8K3A0 234 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Dnajc14Q921R4 703 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Lmnb2P21619 596 aaKnown RBP11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 DlatQ8BMF4 642 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Eif2b5Q8CHW4 717 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ero1aQ8R180 464 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Mfap3Q922T2 349 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Vstm4T1NXB5 319 aa11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 CoblQ5NBX1 1337 aaKnown RBP11.35□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ddx23D3Z0M9 819 aaKnown RBP11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Clcn6O35454 870 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Tcp11Q01755 566 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Q3UJC8 639 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ell2Q3UKU1 639 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 CactinQ9CS00 772 aaKnown RBP11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Rapgef4Q9EQZ6 1011 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Sorbs3Q9R1Z8 733 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Mapk8ip1Q9WVI9 707 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Nrg3O35181 713 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Stk10O55098 966 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Cog7Q3UM29 770 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 2310002L09RikQ9D7L5 217 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Abcc6Q9R1S7 1498 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Tbc1d2B1AVH7 922 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Eef2kO08796 724 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Elf1Q60775 612 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 CutaQ9CQ89 177 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Capn12Q9ER56 720 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Copb1Q9JIF7 953 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Col17a1Q07563 1470 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Gm5936A2BG95 728 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Gm5640A3KG49 728 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ccdc13D3YV10 709 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Sept7O55131 436 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Art2aP17981 287 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Yipf3Q3UDR8 347 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Nlrp2Q4PLS0 1046 aaKnown RBP11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Krt12Q64291 487 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Prdm4Q80V63 803 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Cplx3Q8R1B5 158 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Ccdc80Q8R2G6 949 aa11.34□□□□□ -0.59
Lig4-201ENSMUST00000095476 Gdap1O88741 358 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 MycbpapQ5SUV2 932 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Prdm1Q60636 856 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Enox1Q8BHR2 643 aaKnown RBP11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Clasp2Q8BRT1 1286 aaKnown RBP11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Myo3bQ1EG27 1305 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gm6121L7MUF1 212 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 DesP31001 469 aaKnown RBP11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Lins1Q3U1D0 764 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Slc10a4Q3UEZ8 437 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Spata4Q8K3V1 295 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Slc26a7Q8R2Z3 656 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Pacsin2Q9WVE8 486 aaKnown RBP11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gucy1b3O54865 620 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Surf1P09925 306 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gnat2P50149 354 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 ErmnQ5EBJ4 281 aa11.33□□□□□ -0.6
Lig4-201ENSMUST00000095476 Tbc1d1Q60949 1255 aa11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms