RNA–Protein interactions for RNA: ENSMUST00000093132.12

Clk4-201, Transcript of Dual specificity protein kinase CLK4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk4, Length 1,949 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-201ENSMUST00000093132 Myl3P09542 204 aa20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 Qrich1Q3UA37 777 aa20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 Ckap2Q3V1H1 664 aa20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 Usp50Q6P8X6 390 aa20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 Ift74Q8BKE9 600 aa20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 Iffo2Q8R2V2 512 aa20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 Mtmr4Q91XS1 1190 aa20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 Naaladl2A0A0N4SUJ3 795 aa20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 Metap2O08663 478 aaKnown RBP20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 Stx8O88983 236 aa20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 CtshP49935 333 aa20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 Q3UJP5 209 aa20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 D630036H23RikQ3UQD6 204 aa20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 Gm11437Q5QR91 290 aa20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 Tsr2Q8C8T8 191 aa20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 Zcchc17Q9ESX4 241 aaKnown RBP20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 Rcan1Q9JHG6 198 aa20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 B3galt4Q9Z0F0 371 aa20.55■□□□□ 0.88
Clk4-201ENSMUST00000093132 Polr2aP08775 1970 aaKnown RBP20.54■□□□□ 0.88
Clk4-201ENSMUST00000093132 Bace1P56818 501 aa20.54■□□□□ 0.88
Clk4-201ENSMUST00000093132 Sema3eP70275 775 aa20.54■□□□□ 0.88
Clk4-201ENSMUST00000093132 Cep63Q3UPP8 700 aa20.54■□□□□ 0.88
Clk4-201ENSMUST00000093132 Nxf7Q80SZ6 620 aaKnown RBP20.54■□□□□ 0.88
Clk4-201ENSMUST00000093132 St18Q80TY4 1045 aa20.54■□□□□ 0.88
Clk4-201ENSMUST00000093132 Snapc2Q91XA5 359 aa20.54■□□□□ 0.88
Clk4-201ENSMUST00000093132 GrapQ9CX99 217 aa20.54■□□□□ 0.88
Clk4-201ENSMUST00000093132 Tmem47Q9JJG6 181 aa20.54■□□□□ 0.88
Clk4-201ENSMUST00000093132 Ddx20Q9JJY4 825 aaKnown RBP20.54■□□□□ 0.88
Clk4-201ENSMUST00000093132 SmapQ9R0P4 181 aaKnown RBP20.54■□□□□ 0.88
Clk4-201ENSMUST00000093132 WaplQ65Z40 1200 aaKnown RBP20.53■□□□□ 0.88
Clk4-201ENSMUST00000093132 Alg3Q8K2A8 438 aa20.53■□□□□ 0.88
Clk4-201ENSMUST00000093132 Aldh1b1Q9CZS1 519 aa20.53■□□□□ 0.88
Clk4-201ENSMUST00000093132 Mad2l2Q9D752 211 aa20.53■□□□□ 0.88
Clk4-201ENSMUST00000093132 Dmrtc1Q9D9R7 182 aa20.53■□□□□ 0.88
Clk4-201ENSMUST00000093132 Trmt112Q9DCG9 125 aa20.53■□□□□ 0.88
Clk4-201ENSMUST00000093132 Tmod2Q9JKK7 351 aa20.53■□□□□ 0.88
Clk4-201ENSMUST00000093132 Sema3fO88632 785 aa20.53■□□□□ 0.88
Clk4-201ENSMUST00000093132 Alppl2P24823 529 aa20.53■□□□□ 0.88
Clk4-201ENSMUST00000093132 Adgre1Q61549 931 aa20.53■□□□□ 0.88
Clk4-201ENSMUST00000093132 Mapk4Q6P5G0 583 aa20.53■□□□□ 0.88
Clk4-201ENSMUST00000093132 Gpsm2Q8VDU0 679 aa20.53■□□□□ 0.88
Clk4-201ENSMUST00000093132 Smc3Q9CW03 1217 aaKnown RBP20.53■□□□□ 0.88
Clk4-201ENSMUST00000093132 XdhQ00519 1335 aa20.52■□□□□ 0.88
Clk4-201ENSMUST00000093132 Ces1hD3Z298 562 aa20.52■□□□□ 0.88
Clk4-201ENSMUST00000093132 Usp5P56399 858 aaKnown RBP20.52■□□□□ 0.88
Clk4-201ENSMUST00000093132 Traf3ip1Q149C2 625 aa20.52■□□□□ 0.88
Clk4-201ENSMUST00000093132 Tmtc2Q56A06 836 aa20.52■□□□□ 0.88
Clk4-201ENSMUST00000093132 Glra4Q61603 456 aa20.52■□□□□ 0.88
Clk4-201ENSMUST00000093132 Stxbp2Q64324 593 aa20.52■□□□□ 0.88
Clk4-201ENSMUST00000093132 Rbm28Q8CGC6 750 aaKnown RBP20.52■□□□□ 0.88
Clk4-201ENSMUST00000093132 Igf2bp3Q9CPN8 579 aaKnown RBP20.52■□□□□ 0.88
Clk4-201ENSMUST00000093132 Zkscan1Q8BGS3 561 aaKnown RBP20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Phf20Q8BLG0 1010 aaKnown RBP20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Phf20l1Q8CCJ9 1013 aa20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 C8aQ8K182 587 aa20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Gripap1Q8VD04 806 aa20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Ttll1Q91V51 423 aa20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Clstn1Q9EPL2 979 aa20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Wdr19Q3UGF1 1341 aa20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Gm20425E9Q035 978 aaKnown RBP20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 A430078G23RikE9Q7Y4 484 aa20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Calm1P0DP26 149 aaKnown RBP20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Calm2P0DP27 149 aaKnown RBP20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Calm3P0DP28 149 aaKnown RBP20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 L1camP11627 1260 aa20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Sept2P42208 361 aaKnown RBP20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 SrprbP47758 269 aa20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Akap4Q60662 849 aa20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Smarcc2Q6PDG5 1213 aa20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Inpp5bQ8K337 993 aa20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Trex1Q91XB0 314 aa20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Nop2Q922K7 793 aaKnown RBP20.51■□□□□ 0.87
Clk4-201ENSMUST00000093132 Atp8b3Q6UQ17 1335 aa20.5■□□□□ 0.87
Clk4-201ENSMUST00000093132 Pitpnm2Q6ZPQ6 1335 aa20.5■□□□□ 0.87
Clk4-201ENSMUST00000093132 Limch1Q3UH68 1057 aa20.5■□□□□ 0.87
Clk4-201ENSMUST00000093132 Ppp2r5bQ6PD28 497 aa20.5■□□□□ 0.87
Clk4-201ENSMUST00000093132 Zbtb39Q6PDK0 712 aa20.5■□□□□ 0.87
Clk4-201ENSMUST00000093132 Gimap7Q8R379 293 aa20.5■□□□□ 0.87
Clk4-201ENSMUST00000093132 Tut1Q8R3F9 869 aa20.5■□□□□ 0.87
Clk4-201ENSMUST00000093132 Acot3Q9QYR7 432 aa20.5■□□□□ 0.87
Clk4-201ENSMUST00000093132 Pcdh15Q99PJ1 1943 aa20.5■□□□□ 0.87
Clk4-201ENSMUST00000093132 Tmem130Q6NXM3 419 aa20.49■□□□□ 0.87
Clk4-201ENSMUST00000093132 TicrrQ8BQ33 1889 aa20.49■□□□□ 0.87
Clk4-201ENSMUST00000093132 Epc2Q8C0I4 808 aa20.49■□□□□ 0.87
Clk4-201ENSMUST00000093132 Tomm22Q9CPQ3 142 aa20.49■□□□□ 0.87
Clk4-201ENSMUST00000093132 Lonrf3Q9D4H7 753 aa20.49■□□□□ 0.87
Clk4-201ENSMUST00000093132 Gdpd2Q9ESM6 539 aa20.49■□□□□ 0.87
Clk4-201ENSMUST00000093132 Palm3A2TJV2 734 aa20.48■□□□□ 0.87
Clk4-201ENSMUST00000093132 Mmp20P57748 482 aa20.48■□□□□ 0.87
Clk4-201ENSMUST00000093132 Rsph3aQ3UFY4 516 aa20.48■□□□□ 0.87
Clk4-201ENSMUST00000093132 Ccdc148Q6P5U8 527 aa20.48■□□□□ 0.87
Clk4-201ENSMUST00000093132 Ube2oQ6ZPJ3 1288 aa20.48■□□□□ 0.87
Clk4-201ENSMUST00000093132 Angel2Q8K1C0 544 aa20.48■□□□□ 0.87
Clk4-201ENSMUST00000093132 Plcd3Q8K2J0 785 aa20.48■□□□□ 0.87
Clk4-201ENSMUST00000093132 Foxp1P58462 705 aa20.47■□□□□ 0.87
Clk4-201ENSMUST00000093132 Ppfia3P60469 1194 aa20.47■□□□□ 0.87
Clk4-201ENSMUST00000093132 1700013D24RikQ0P521 120 aa20.47■□□□□ 0.87
Clk4-201ENSMUST00000093132 Zfp953Q3UPV7 304 aa20.47■□□□□ 0.87
Clk4-201ENSMUST00000093132 Krt74Q6IFZ9 495 aa20.47■□□□□ 0.87
Clk4-201ENSMUST00000093132 Senp6Q6P7W0 1132 aa20.47■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms