RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Col3a1P08121 1464 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Carmil3Q3UFQ8 1375 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Ccng2O08918 344 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Me1P06801 572 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Myl3P09542 204 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 RargP18911 458 aaKnown RBP8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Slc7a3P70423 618 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Alx1Q8C8B0 326 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Dact1Q8R4A3 778 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Smc1aQ9CU62 1233 aaKnown RBP8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Mrps25Q9D125 171 aaKnown RBP8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Kif13bA0A286YCV9 1847 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Cfap44E9Q5M6 1843 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Cyp3a59D3Z2W7 503 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Tuft1O08970 390 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Pde6aP27664 859 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Il15P48346 162 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 FntaQ61239 377 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Larp6Q8BN59 492 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Slc44a4Q91VA1 707 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Prc1Q99K43 603 aaKnown RBP8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Desi2Q9D291 194 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Acot9Q9R0X4 439 aaKnown RBP8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Pde3aQ9Z0X4 1141 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Atp12aQ9Z1W8 1035 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Sh3tc1G3X9F6 1346 aa8.18□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Duox1A2AQ92 1551 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Rsrc2A2RTL5 376 aaKnown RBP8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Ugt1a6bK9J7B2 531 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Nmt2O70311 529 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Prl7d1P04769 244 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Gng11P61953 73 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Specc1lQ2KN98 1118 aaKnown RBP8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Mum1l1Q4VA55 681 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Ugt1a6Q64435 531 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Ugt1a7cQ6ZQM8 531 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Gdap1l1Q8VE33 370 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Golga5Q9QYE6 729 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Nek3Q9R0A5 511 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Myh15E9Q264 1925 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 MeiocA2AG06 965 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Dennd3A2RT67 1274 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Atp8b5A3FIN4 1183 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Ces1hD3Z298 562 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Trap1aP19473 224 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Chrna5Q2MKA5 467 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Vars2Q3U2A8 1060 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Ccdc51Q3URS9 406 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Gm28047Q3US59 414 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Gas2l3Q3UWW6 683 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Il17raQ60943 864 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Abcf1Q6P542 837 aaKnown RBP8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Ankrd1Q9CR42 319 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Cep89Q9CZX2 791 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Atp1a4Q9WV27 1032 aa8.17□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Frmd7A2AD83 703 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Jdp2P97875 163 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Epha2Q03145 977 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Map9Q3TRR0 646 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Ccdc174Q3U155 467 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Gm5592Q3V0A6 857 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Krt39Q6IFX4 482 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Pcdhb14Q6PB90 796 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Glis3Q6XP49 780 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Slc20a2Q80UP8 656 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Evc2Q8K1G2 1220 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Ccdc96Q9CR92 584 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Tubb4aQ9D6F9 444 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Gdf11Q9Z1W4 405 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Cdc45Q9Z1X9 566 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Nup98Q6PFD9 1816 aaKnown RBP8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Gm3409A0A0G2JE67 319 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Arhgap4B1AUY3 965 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Metap2O08663 478 aaKnown RBP8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Kifc2O08672 792 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Pde11aP0C1Q2 933 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Bag1Q60739 355 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 CtcfQ61164 736 aaKnown RBP8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Hspa4Q61316 841 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Acnat2Q8BGG9 420 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Tpcn2Q8BWC0 731 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Rec8Q8C5S7 591 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Rbm19Q8R3C6 952 aaKnown RBP8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 BaatQ91X34 420 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Dydc2Q9D3X8 139 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 1700018B08RikQ9DA83 213 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Zcchc17Q9ESX4 241 aaKnown RBP8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Tulp1Q9Z273 543 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Eif2ak3Q9Z2B5 1114 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Myh3P13541 1940 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 1700017N19RikA0A087WPJ1 469 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Kif3cO35066 796 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Gja5Q01231 358 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Prl2c1Q5SVL9 228 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Tbx2Q60707 711 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Ctnna3Q65CL1 895 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Krt40Q6IFX3 439 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Srek1Q8BZX4 494 aaKnown RBP8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Efcab8Q8C9R9 203 aa8.16□□□□□ -1.1
Clrn1-202ENSMUST00000055636 Myl6bQ8CI43 207 aa8.16□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms