RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Lca5lQ8C0X0 741 aa21.82■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Apbb1ipQ8R5A3 670 aa21.82■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Med23Q80YQ2 1367 aa21.81■■□□□ 1.08
Vti1b-201ENSMUST00000055262 A0A1W2P6Q8 802 aa21.81■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Gm9048A0A1W2P7H4 802 aa21.81■■□□□ 1.08
Vti1b-201ENSMUST00000055262 A0A1W2P7Z8 802 aa21.81■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Gm9046A0A1W2P855 802 aa21.81■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Gm10093D3YYI8 482 aa21.81■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Nkx1-1G3UXB3 402 aa21.81■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Hdac1O09106 482 aaKnown RBP21.81■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Qrich1Q3UA37 777 aa21.81■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Ccdc158Q8CDI6 1109 aa21.81■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Ndufv1Q91YT0 464 aa21.81■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Rfc4Q99J62 364 aa21.81■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Efcc1Q9JJF6 558 aa21.81■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Zbtb12Q9Z150 459 aa21.81■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Myh14Q6URW6 2000 aa21.81■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Oog1E9Q5G7 496 aa21.8■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Pald1P70261 859 aa21.8■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Trmt1Q3TX08 663 aa21.8■■□□□ 1.08
Vti1b-201ENSMUST00000055262 MyrflQ3UN70 904 aa21.8■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Slc44a1Q6X893 653 aa21.8■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Otop3Q80UF9 577 aa21.8■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Btbd19S4R1I0 287 aa21.8■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Skint7A7XV04 395 aa21.79■■□□□ 1.08
Vti1b-201ENSMUST00000055262 PtpraP18052 829 aa21.79■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Sema3eP70275 775 aa21.79■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Adam39Q7M762 756 aa21.79■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Lrrc24Q8BHA1 521 aa21.79■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Socs7Q8VHQ2 579 aa21.79■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Trex1Q91XB0 314 aa21.79■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Odf2lQ9D478 642 aa21.79■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Klrc1Q9Z202 244 aa21.79■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Frmpd4A2AFR3 1320 aa21.78■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Tcof1O08784 1320 aaKnown RBP21.78■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Gm36210A0A1B0GS00 229 aa21.78■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Btn2a2A4QPC6 514 aa21.78■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Brip1Q5SXJ3 1174 aa21.78■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Fam170aQ66LM6 333 aa21.78■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Sv2cQ69ZS6 727 aa21.78■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Rtp1Q8C8C1 263 aa21.78■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Inpp5bQ8K337 993 aa21.78■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Tanc1Q0VGY8 1856 aa21.78■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Rabep1O35551 862 aa21.77■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Dpp8Q80YA7 892 aa21.77■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Rbm28Q8CGC6 750 aaKnown RBP21.77■■□□□ 1.08
Vti1b-201ENSMUST00000055262 LlphQ9D945 130 aaKnown RBP21.77■■□□□ 1.08
Vti1b-201ENSMUST00000055262 Gm44503E9PYU5 387 aa21.77■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Eya3P97480 510 aa21.77■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Kansl1lQ5DTI6 991 aa21.77■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Gm21985Q6P6P5 1106 aa21.77■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Sp8Q8BMJ8 486 aa21.77■■□□□ 1.07
Vti1b-201ENSMUST00000055262 QarsQ8BML9 775 aa21.77■■□□□ 1.07
Vti1b-201ENSMUST00000055262 EngaseQ8BX80 734 aa21.77■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Calhm4Q8CE93 315 aa21.77■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Syne4Q8CII8 388 aa21.77■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Dnaaf4Q8R368 420 aa21.77■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Usp33Q8R5K2 909 aa21.77■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Cdca7lQ922M5 438 aa21.77■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Sil1Q9EPK6 465 aa21.77■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Gm29094F6Q785 221 aa21.76■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Lipo1J3QME6 396 aa21.76■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Has3O08650 554 aa21.76■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Gjb2Q00977 226 aa21.76■■□□□ 1.07
Vti1b-201ENSMUST00000055262 AnlnQ8K298 1121 aaKnown RBP21.76■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Nup133Q8R0G9 1155 aa21.76■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Bub1bQ9Z1S0 1052 aa21.76■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Mybl2P48972 704 aa21.75■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Exosc10P56960 887 aaKnown RBP21.75■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Arl14Q3SXC5 192 aa21.75■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Rps6kb1Q8BSK8 525 aa21.75■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Tomm22Q9CPQ3 142 aa21.75■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Plcg1Q62077 1302 aa21.74■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Pus7B7ZNL8 666 aaKnown RBP21.74■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Cyp2d34L7N463 504 aa21.74■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Sept2P42208 361 aaKnown RBP21.74■■□□□ 1.07
Vti1b-201ENSMUST00000055262 1700010I14RikQ7TPG0 532 aa21.74■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Ncaph2Q8BSP2 607 aa21.74■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Scfd2Q8BTY8 684 aa21.74■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Gpr108Q91WD0 569 aa21.74■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Q9D9S1 216 aa21.74■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Ripk3Q9QZL0 486 aa21.74■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Prr7Q3V0I2 269 aa21.73■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Fstl1Q62356 306 aa21.73■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Ints3Q7TPD0 1041 aaKnown RBP21.73■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Tti2Q8BGV4 512 aa21.73■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Ift74Q8BKE9 600 aa21.73■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Fsd2Q8BZ52 692 aa21.73■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Usp31E9Q6Y8 1344 aa21.73■■□□□ 1.07
Vti1b-201ENSMUST00000055262 ThbdP15306 577 aa21.72■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Ccnd3P30282 292 aa21.72■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Zfp341Q6PGC9 846 aa21.72■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Tekt3Q6X6Z7 490 aa21.72■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Cep55Q8BT07 462 aa21.72■■□□□ 1.07
Vti1b-201ENSMUST00000055262 PpatQ8CIH9 517 aa21.72■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Slx4ipQ9D7Y9 413 aa21.72■■□□□ 1.07
Vti1b-201ENSMUST00000055262 SmapQ9R0P4 181 aaKnown RBP21.72■■□□□ 1.07
Vti1b-201ENSMUST00000055262 SynrgQ5SV85 1306 aa21.72■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Adgra2Q91ZV8 1336 aa21.72■■□□□ 1.07
Vti1b-201ENSMUST00000055262 Zscan18E9PUD6 809 aa21.71■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms