RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Gm9046A0A1W2P855 802 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Capn2O08529 700 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 MycbpapQ5SUV2 932 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Cdc5lQ6A068 802 aaKnown RBP11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Gga3Q8BMI3 718 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Zc3h6Q8BYK8 1177 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Pcdha7Q91Y13 937 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Stag1Q9D3E6 1258 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Ercc4Q9QZD4 917 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Pdcd6ipQ9WU78 869 aaKnown RBP11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Frmd7A2AD83 703 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Pcdh10E9PXQ7 1057 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Slf2Q6P9P0 1278 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Susd4Q8BH32 490 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Paf1Q8K2T8 535 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Rapgef4Q9EQZ6 1011 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Gm43738A0A0G2JEA5 862 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Pet2A2AHY8 747 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Gm21969J3QJZ1 289 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Snrpa1P57784 255 aaKnown RBP11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Map9Q3TRR0 646 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Q3TYL0 343 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Spata5Q3UMC0 893 aaKnown RBP11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Gucy2cQ3UWA6 1072 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Anks1bQ8BIZ1 1259 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Olfm5Q8BU90 496 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Cadps2Q8BYR5 1297 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 CpvlQ9D3S9 478 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Lonrf3Q9D4H7 753 aa11.13□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Igsf9bE9PZ19 1328 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Prss40A6H6T1 365 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Rad23aP54726 363 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Dynll1P63168 89 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Znhit6Q3UFB2 460 aaKnown RBP11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Abtb2Q7TQI7 1024 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Ctdp1Q7TSG2 960 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Cep128Q8BI22 1102 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Prc1Q99K43 603 aaKnown RBP11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Myh6Q02566 1938 aaKnown RBP11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Nav1Q8CH77 1875 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Prr5lA2AVJ5 370 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Rsrc2A2RTL5 376 aaKnown RBP11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Tbc1d2B1AVH7 922 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Traf1P39428 409 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Nme8Q715T0 586 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Iqcb1Q8BP00 598 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Q8K2W9 541 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Mis18aQ9CZJ6 204 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Prr16A3KMN5 304 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Bnip3O55003 187 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Nmt2O70311 529 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Znf496Q5SXI5 585 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Sval3Q76I99 144 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Trim34aQ99PP6 485 aa11.12□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 IkbkbO88351 757 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Gtpbp6Q3U6U5 514 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Tshz1Q5DTH5 1084 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 RragbQ6NTA4 374 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Snd1Q78PY7 910 aaKnown RBP11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Sept9Q80UG5 583 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Apol10aQ8CCA5 318 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Ano2Q8CFW1 1002 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Txndc5Q91W90 417 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 EcsitQ9QZH6 435 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Foxo3Q9WVH4 672 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Ugt1a8D3Z748 530 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Ugt1a10E9PXN7 530 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Cyp2c23E9Q5K4 494 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Lrrc6O88978 473 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Rnf41Q8BH75 317 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Miga2Q8BK03 593 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Triml1Q8BVP1 470 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Vps53Q8CCB4 832 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Ddx54Q8K4L0 874 aaKnown RBP11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Klhl40Q9D783 621 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Col18a1P39061 1774 aa11.11□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Cul4bA2A432 970 aaKnown RBP11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Rgs22G3UYX5 1258 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Cyp3a25O09158 503 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Siah1aP61092 282 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 1700013D24RikQ0P521 120 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Ccdc57Q6PHN1 1016 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Map3k11Q80XI6 850 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Jmjd4Q8BFT6 427 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 ZgpatQ8VDM1 511 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Uap1Q91YN5 522 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Mfap3Q922T2 349 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Mfap3lQ9D3X9 409 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Tdo2P48776 406 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Kiaa1468Q148V7 1216 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 TxlnaQ6PAM1 554 aaKnown RBP11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Tas2r124Q7M718 309 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Adck5Q80V03 582 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Gdap1l1Q8VE33 370 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Tmem132aQ922P8 1018 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Tob2Q9JM55 345 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Phlpp1Q8CHE4 1687 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Exoc3l2D3YUP5 789 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Gcom1E9PZ54 550 aa11.1□□□□□ -0.63
Ccdc40-202ENSMUST00000053440 Mdh1P14152 334 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms