RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Jmjd4Q8BFT6 427 aa18.32■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Bap1Q99PU7 728 aa18.32■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Pold4Q9CWP8 107 aa18.32■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Calml3Q9D6P8 149 aa18.32■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Atp1a4Q9WV27 1032 aa18.32■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Ugt1a6bK9J7B2 531 aa18.31■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Ugt1a6Q64435 531 aa18.31■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Fnbp4Q6ZQ03 1031 aa18.31■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Ugt1a7cQ6ZQM8 531 aa18.31■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Efcab8Q8C9R9 203 aa18.31■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Phldb2Q8K1N2 1249 aa18.31■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Iqca1Q9CUL5 857 aa18.31■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Rbm33Q9CXK9 1231 aaKnown RBP18.31■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Dock5B2RY04 1868 aa18.31■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Krt24A1L317 512 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Sema3fO88632 785 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 GabrdP22933 449 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Tmco3Q8BH01 678 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Bicdl2Q8CHW5 507 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Mfap3Q922T2 349 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Mrps25Q9D125 171 aaKnown RBP18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Mfap3lQ9D3X9 409 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Tob2Q9JM55 345 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Myh13B1AR69 1938 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Col20a1Q923P0 1320 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Zbtb21E9Q444 1094 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Traf1P39428 409 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Rad23aP54726 363 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Usp5P56399 858 aaKnown RBP18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Cdr2P97817 455 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Cdc23Q8BGZ4 597 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Ufl1Q8CCJ3 793 aaKnown RBP18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 BaatQ91X34 420 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Lrrc59Q922Q8 307 aaKnown RBP18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Abhd2Q9QXM0 425 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 EcsitQ9QZH6 435 aa18.3■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Ulk4Q3V129 1303 aa18.29■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Prr5lA2AVJ5 370 aa18.29■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Calm1P0DP26 149 aaKnown RBP18.29■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Calm2P0DP27 149 aaKnown RBP18.29■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Calm3P0DP28 149 aaKnown RBP18.29■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Rad23bP54728 416 aa18.29■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Rasa2P58069 847 aa18.29■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Atp8b1Q148W0 1251 aa18.29■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Olfr121Q5CZY0 321 aa18.29■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Trim25Q61510 634 aaKnown RBP18.29■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Olfr118Q7TRJ6 321 aa18.29■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Wdr3Q8BHB4 942 aaKnown RBP18.29■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Slc5a4bQ91ZP4 660 aa18.29■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Rbbp6P97868 1790 aaKnown RBP18.29■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Ecm29Q6PDI5 1840 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Phldb3E9QAF4 648 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Ovgp1Q62010 721 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Hdac4Q6NZM9 1076 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Adck5Q80V03 582 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 RbsnQ80Y56 783 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Ttc12Q8BW49 704 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Rapgef4Q9EQZ6 1011 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Cxcl11Q9JHH5 100 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Znfx1Q8R151 1909 aaKnown RBP18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Ces1hD3Z298 562 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Trappc10Q3TLI0 1259 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Ctnna3Q65CL1 895 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Cep85Q8BMK0 761 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Rasal3Q8C2K5 1041 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 E2f4Q8R0K9 410 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Ccdc12Q8R344 166 aaKnown RBP18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Dact1Q8R4A3 778 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Pcdha7Q91Y13 937 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Vps16Q920Q4 839 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Desi2Q9D291 194 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Uchl5Q9WUP7 329 aa18.28■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Gm43738A0A0G2JEA5 862 aa18.27■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Kcnj4P52189 445 aa18.27■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Slc7a3P70423 618 aa18.27■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Tmtc2Q56A06 836 aa18.27■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Susd4Q8BH32 490 aa18.27■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Hgh1Q8C3I8 393 aa18.27■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Taf6lQ8R2K4 616 aa18.27■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Smc1aQ9CU62 1233 aaKnown RBP18.27■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 GdaQ9R111 454 aa18.27■□□□□ 0.52
Ttc39b-202ENSMUST00000048274 Scgb2b19J3QM75 112 aa18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Prl7d1P04769 244 aa18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 GpiP06745 558 aaKnown RBP18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Il7P10168 154 aa18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Dnajc2P54103 621 aaKnown RBP18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Tubb5P99024 444 aaKnown RBP18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Ankrd40Q5SUE8 363 aa18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Tsr1Q5SWD9 803 aa18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Lamb3Q61087 1168 aa18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Clic6Q8BHB9 596 aa18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 SelenooQ9DBC0 667 aa18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Tfcp2Q9ERA0 502 aa18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Cyp26c1B2RXA7 518 aa18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Siah1aP61092 282 aa18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Gucy2cQ3UWA6 1072 aa18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Cyp24a1Q64441 514 aa18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Esco1Q69Z69 843 aa18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Pram1Q6BCL1 675 aa18.26■□□□□ 0.51
Ttc39b-202ENSMUST00000048274 Krt40Q6IFX3 439 aa18.26■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms