RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Kmt5bQ3U8K7 883 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Ovgp1Q62010 721 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Usp50Q6P8X6 390 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Csrnp2Q8BGQ2 534 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Dnaaf4Q8R368 420 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 NenfQ9CQ45 171 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Baiap2l1Q9DBJ3 514 aa12.16□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 1700029H14RikE9PY36 240 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Psmb7P70195 277 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Gjb4Q02738 266 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Fam89aQ14BJ1 175 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 MycbpapQ5SUV2 932 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Cyp7b1Q60991 507 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Ggt6Q6PDE7 497 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Luc7l2Q7TNC4 392 aaKnown RBP12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Slc5a4bQ91ZP4 660 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Saal1Q9D2C2 474 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Irs4Q9Z0Y7 1216 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Kndc1Q0KK55 1742 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Zscan20B2KFW1 1030 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 1700013D24RikQ0P521 120 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Zc3h12cQ5DTV4 884 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Sun3Q5SS91 320 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Ppm1eQ80TL0 749 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Hps6Q8BLY7 805 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Klc3Q91W40 508 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Apobec3Q99J72 440 aaKnown RBP12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 NsmfQ99NF2 532 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Tktl2Q9D4D4 627 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 EcsitQ9QZH6 435 aa12.15□□□□□ -0.46
Ptcd1-201ENSMUST00000031628 Dnai2A2AC93 623 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Il7P10168 154 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Foxp1P58462 705 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Q66JV7 365 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Znf532Q6NXK2 1036 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Rbm15bQ6PHZ5 887 aaKnown RBP12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Ccp110Q7TSH4 1004 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Olfm5Q8BU90 496 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Ccdc150Q8CDI7 1110 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Ints4Q8CIM8 964 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Nod2Q8K3Z0 1020 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Nup133Q8R0G9 1155 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 ParvgQ9ERD8 331 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Myh7bA2AQP0 1941 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 NesQ6P5H2 1864 aaKnown RBP12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Sycp2lA0A0M3U1B0 842 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Stox1B2RQL2 990 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Cd3dP04235 173 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 NefhP19246 1090 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Ca8P28651 291 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Panx2Q6IMP4 677 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Cfap69Q8BH53 942 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Dydc1Q9D9T0 175 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Arap2Q8BZ05 1703 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Znf638Q61464 1960 aaKnown RBP12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Wdr19Q3UGF1 1341 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Prr16A3KMN5 304 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Stx8O88983 236 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Pla2g4bP0C871 782 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Usp53P15975 1069 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Celf1P28659 486 aaKnown RBP12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Ppp1r21Q3TDD9 780 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Slc27a1Q60714 646 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Dbndd1Q9CZ00 160 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Golga5Q9QYE6 729 aa12.14□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 A0A0U1RNP2 1173 aa12.13□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 GabrdP22933 449 aa12.13□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Fkbp1aP26883 108 aaKnown RBP12.13□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Rfc1P35601 1131 aa12.13□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Sf3b2Q3UJB0 878 aaKnown RBP12.13□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Evc2Q8K1G2 1220 aa12.13□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Mtmr6Q8VE11 617 aa12.13□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 BaatQ91X34 420 aa12.13□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 LtbrP50284 415 aa12.13□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Klra5Q60652 266 aa12.13□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Ces3aQ63880 571 aa12.13□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Fam53cQ8BXQ8 393 aa12.13□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Ces3bQ8VCU1 571 aa12.13□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 GmnnO88513 206 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Tpm1P58771 284 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Ell2Q3UKU1 639 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Cdc37Q61081 379 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Lamb3Q61087 1168 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Slc44a1Q6X893 653 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Triml1Q8BVP1 470 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Ankrd1Q9CR42 319 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Ercc4Q9QZD4 917 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Letm1Q9Z2I0 738 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Tbc1d8bA3KGB4 1114 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Actn3O88990 900 aaKnown RBP12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Ccdc102aQ3TMW1 549 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Cnnm2Q3TWN3 875 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Gga3Q8BMI3 718 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Ankk1Q8BZ25 745 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Smc2Q8CG48 1191 aaKnown RBP12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Filip1Q9CS72 1211 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Lgr5Q9Z1P4 907 aa12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Ktn1Q61595 1327 aaKnown RBP12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Myh6Q02566 1938 aaKnown RBP12.12□□□□□ -0.47
Ptcd1-201ENSMUST00000031628 Frmd7A2AD83 703 aa12.12□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms