RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Rbm28Q8CGC6 750 aaKnown RBP23.14■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Golph3lQ8R088 285 aaKnown RBP23.14■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Kiaa0319Q5SZV5 1081 aa23.14■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Slc27a1Q60714 646 aa23.14■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Mrps25Q9D125 171 aaKnown RBP23.14■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Tbc1d8Q9Z1A9 1134 aa23.14■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Slc44a4Q91VA1 707 aa23.13■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Tfcp2Q9ERA0 502 aa23.13■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Nup133Q8R0G9 1155 aa23.13■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 A0A1Y7VML8 143 aa23.12■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Ppp2r5bQ6PD28 497 aa23.12■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 IqcgQ80W32 419 aa23.12■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Stn1Q8K2X3 378 aa23.12■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Card6E9PWH2 1175 aa23.12■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Oxsr1Q6P9R2 527 aa23.12■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Kif1bpQ6ZPU9 617 aa23.12■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Rec8Q8C5S7 591 aa23.11■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Tpd52l1O54818 204 aa23.11■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Trap1aP19473 224 aa23.11■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Myo1bP46735 1107 aa23.11■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Fam89aQ14BJ1 175 aa23.11■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Larp6Q8BN59 492 aa23.11■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Myl6bQ8CI43 207 aa23.11■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Aak1Q3UHJ0 959 aa23.11■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Phf20l1Q8CCJ9 1013 aa23.11■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Dynll2Q9D0M5 89 aa23.11■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 UvssaQ9D479 717 aa23.11■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Zfp597E9Q6S0 419 aa23.1■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Ampd3O08739 766 aa23.1■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Gas1Q01721 343 aa23.1■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Traf3ip1Q149C2 625 aa23.1■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Usp50Q6P8X6 390 aa23.1■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Q8K2W9 541 aa23.1■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Tpm3P21107 285 aaKnown RBP23.1■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Ftl1P29391 183 aa23.1■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Rpusd2Q149F1 553 aa23.1■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Cep131Q62036 1060 aa23.1■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Haus7Q8BKT8 364 aa23.1■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Tcp11l1Q8BTG3 509 aa23.1■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Trmt44Q9D2Q2 713 aa23.1■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 1700013D24RikQ0P521 120 aa23.09■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Msl1Q6PDM1 616 aa23.09■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Eif4enif1Q9EST3 983 aaKnown RBP23.09■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Tob2Q9JM55 345 aa23.09■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Calm1P0DP26 149 aaKnown RBP23.09■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Calm2P0DP27 149 aaKnown RBP23.09■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Calm3P0DP28 149 aaKnown RBP23.09■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Usp53P15975 1069 aa23.09■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Prl2c1Q5SVL9 228 aa23.09■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Prpf4bQ61136 1007 aaKnown RBP23.09■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Slc51aQ8R000 340 aa23.09■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Tspyl4Q8VD63 406 aa23.09■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Trim11Q99PQ2 467 aa23.09■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Zscan29E9Q5B4 869 aa23.08■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Bin1O08539 588 aaKnown RBP23.08■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Cyp3a25O09158 503 aa23.08■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Stx8O88983 236 aa23.08■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Dhx40Q6PE54 779 aaKnown RBP23.08■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Zfp397Q7TNK4 527 aa23.08■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Ndufv1Q91YT0 464 aa23.08■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Prpf3Q922U1 683 aaKnown RBP23.08■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Peak1Q69Z38 1735 aa23.08■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Rai14Q9EP71 979 aaKnown RBP23.08■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Syt10Q9R0N4 523 aa23.08■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Stxbp4Q9WV89 557 aa23.08■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Gdf11Q9Z1W4 405 aa23.08■■□□□ 1.29
Ctdsp1-201ENSMUST00000027367 Golgb1E9PVZ8 3238 aa23.08■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 RdxP26043 583 aaKnown RBP23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Kif2aP28740 705 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 XpcP51612 930 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Gas2l3Q3UWW6 683 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Znf653Q6YND2 615 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Pramel6Q810Y9 485 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Ehd2Q8BH64 543 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Pcdhgc5Q91XW9 944 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 CenpqQ9CPQ5 267 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Prdm11A2AGX3 565 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Ano3A2AHL1 981 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Igsf9bE9PZ19 1328 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Dok7Q18PE0 504 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Fam198bQ3UPI1 517 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Cyp7b1Q60991 507 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Cyp4x1Q6A152 507 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Tekt3Q6X6Z7 490 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Triml1Q8BVP1 470 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Q8BZJ8 459 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Dapk3O54784 448 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Grin1P35438 938 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Ptpn12P35831 775 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Luzp1Q8R4U7 1068 aaKnown RBP23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Large1Q9Z1M7 756 aa23.07■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Ppp4cP97470 307 aa23.06■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Arhgef16Q3U5C8 713 aa23.06■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Tmtc2Q56A06 836 aa23.06■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Tbc1d23Q8K0F1 684 aa23.06■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Nop14Q8R3N1 860 aaKnown RBP23.06■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Lonrf3Q9D4H7 753 aa23.06■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 CebpzP53569 1052 aaKnown RBP23.06■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Slc20a2Q80UP8 656 aa23.06■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 DlatQ8BMF4 642 aa23.06■■□□□ 1.28
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms