RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Usp42B2RQC2 1324 aaKnown RBP9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Aox1O54754 1333 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Znf521Q6KAS7 1311 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Cyp26a1O55127 497 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Hexim1Q8R409 356 aaKnown RBP9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Haus2Q9CQS9 234 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Hs6st3Q9QYK4 470 aa9.02□□□□□ -0.97
Lig3-201ENSMUST00000021039 Ift122Q6NWV3 1182 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Sh3d21Q7TSG5 549 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Nlrp5Q9R1M5 1163 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Ubr1O70481 1757 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Zscan29E9Q5B4 869 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Grem2O88273 168 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 NefhP19246 1090 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Tigd5Q499M4 642 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 KhnynQ80U38 671 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Tmem87aQ8BXN9 555 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Ifih1Q8R5F7 1025 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 NkapQ9D0F4 415 aaKnown RBP9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Dpf1Q9QX66 387 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Sipa1l1Q8C0T5 1782 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Flot1O08917 428 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Foxp1P58462 705 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Oxr1Q4KMM3 866 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Stoml1Q8CI66 399 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Nop14Q8R3N1 860 aaKnown RBP9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Kdm4cQ8VCD7 1054 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 StrbpQ91WM1 672 aaKnown RBP9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Mrps5Q99N87 432 aaKnown RBP9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Mei1Q9D4I2 1268 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Tns2Q8CGB6 1400 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Ssrp1Q08943 708 aaKnown RBP9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Cnga2Q62398 664 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Swap70Q6A028 585 aaKnown RBP9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Mapk4Q6P5G0 583 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Liat1Q810M6 228 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Gpcpd1Q8C0L9 675 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Plcd3Q8K2J0 785 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Ankrd1Q9CR42 319 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Luc7lQ9CYI4 371 aaKnown RBP9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Taf1dQ9D4V4 322 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 CenphQ9QYM8 241 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Uchl5Q9WUP7 329 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Pnpla7A2AJ88 1352 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Cfap53Q9D439 514 aa9.01□□□□□ -0.97
Lig3-201ENSMUST00000021039 Lipo1J3QME6 396 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 RragbQ6NTA4 374 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Ddx10Q80Y44 875 aaKnown RBP9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Slc39a11Q8BWY7 342 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Tsr2Q8C8T8 191 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Cdk8Q8R3L8 464 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Luzp1Q8R4U7 1068 aaKnown RBP9□□□□□ -0.97
Lig3-201ENSMUST00000021039 CpzQ8R4V4 654 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Cavin1O54724 392 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Fbxo11Q7TPD1 930 aaKnown RBP9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Nacc1Q7TSZ8 514 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Olfml1Q8BSH2 233 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Gpsm2Q8VDU0 679 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 NapaQ9DB05 295 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Als2Q920R0 1651 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Ankrd63A2ARS0 390 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Gm28047Q3US59 414 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Ccdc113Q8C5T8 377 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Spon1Q8VCC9 807 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Prkag2Q91WG5 566 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 RabggtaQ9JHK4 567 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Tbc1d2B1AVH7 922 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Abcd1P48410 736 aa9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Rps12P63323 132 aaKnown RBP9□□□□□ -0.97
Lig3-201ENSMUST00000021039 Gli3Q61602 1583 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Syce3B5KM66 88 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Eef2P58252 858 aaKnown RBP8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Sfi1Q3UZY0 1216 aaKnown RBP8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 LrmpQ60664 539 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 L1camP11627 1260 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Nkx2-3P97334 362 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Bola3Q8CEI1 110 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 BaatQ91X34 420 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 NfixP70257 488 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Chrna5Q2MKA5 467 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Arhgef18Q6P9R4 1021 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Tcp11l1Q8BTG3 509 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Zmynd15Q8C0R7 736 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Dynll2Q9D0M5 89 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Fsip1Q9D3V5 435 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Baiap2l1Q9DBJ3 514 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Ccnt1Q9QWV9 724 aaKnown RBP8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Cnot7Q60809 285 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Ppm1eQ80TL0 749 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Sap130Q8BIH0 1057 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Sept11Q8C1B7 431 aaKnown RBP8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Pus3Q9JI38 481 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Chd4Q6PDQ2 1915 aaKnown RBP8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Stx1aO35526 288 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Cetn1P41209 172 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Glra4Q61603 456 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Exoc3Q6KAR6 755 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Trim56Q80VI1 734 aaKnown RBP8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Pramel6Q810Y9 485 aa8.99□□□□□ -0.97
Lig3-201ENSMUST00000021039 Acot3Q9QYR7 432 aa8.99□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms