RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Gm20538F6Z9R1 75 aa8.11□□□□□ -1.11
Pcdha1-202ENSMUST00000193839 Tnp2P11378 117 aa8.1□□□□□ -1.11
Pcdha1-202ENSMUST00000193839 Pdzd2E9Q1M1 2796 aa8.09□□□□□ -1.11
Pcdha1-202ENSMUST00000193839 LrbaQ9ESE1 2856 aa8.06□□□□□ -1.12
Pcdha1-202ENSMUST00000193839 TgO08710 2766 aa8.06□□□□□ -1.12
Pcdha1-202ENSMUST00000193839 Krtap10-4Q08EG8 221 aa8.05□□□□□ -1.12
Pcdha1-202ENSMUST00000193839 SpegQ62407 3262 aa8.03□□□□□ -1.12
Pcdha1-202ENSMUST00000193839 Krtap15-1Q9QZU5 150 aa8.02□□□□□ -1.13
Pcdha1-202ENSMUST00000193839 Gm5767A0A0J9YTU8 78 aa8.01□□□□□ -1.13
Pcdha1-202ENSMUST00000193839 Rps29P62274 56 aa8.01□□□□□ -1.13
Pcdha1-202ENSMUST00000193839 Romo1P60603 79 aa8.01□□□□□ -1.13
Pcdha1-202ENSMUST00000193839 Myo15aQ9QZZ4 3511 aa8.01□□□□□ -1.13
Pcdha1-202ENSMUST00000193839 Rpl37Q9D823 97 aa8□□□□□ -1.13
Pcdha1-202ENSMUST00000193839 Vps13cQ8BX70 3748 aa8□□□□□ -1.13
Pcdha1-202ENSMUST00000193839 ApcQ61315 2845 aa7.94□□□□□ -1.14
Pcdha1-202ENSMUST00000193839 Sec61bQ9CQS8 96 aaKnown RBP7.92□□□□□ -1.14
Pcdha1-202ENSMUST00000193839 Krtap10-10A0A1W2P7T6 217 aa7.91□□□□□ -1.14
Pcdha1-202ENSMUST00000193839 Cox6b2Q80ZN9 88 aa7.9□□□□□ -1.15
Pcdha1-202ENSMUST00000193839 Akap9Q70FJ1 3797 aa7.87□□□□□ -1.15
Pcdha1-202ENSMUST00000193839 Fam229aB2KGE5 128 aa7.84□□□□□ -1.15
Pcdha1-202ENSMUST00000193839 Gm10382Q3V0T5 144 aa7.83□□□□□ -1.16
Pcdha1-202ENSMUST00000193839 Zfhx4Q9JJN2 3550 aa7.82□□□□□ -1.16
Pcdha1-202ENSMUST00000193839 Gm2696A0A1W2P709 240 aa7.8□□□□□ -1.16
Pcdha1-202ENSMUST00000193839 OtogO55225 2910 aa7.79□□□□□ -1.16
Pcdha1-202ENSMUST00000193839 Zfhx3Q61329 3726 aa7.75□□□□□ -1.17
Pcdha1-202ENSMUST00000193839 Muc5acE9QAQ8 3455 aa7.75□□□□□ -1.17
Pcdha1-202ENSMUST00000193839 Spink7Q6IE32 76 aa7.73□□□□□ -1.17
Pcdha1-202ENSMUST00000193839 Helz2E9QAM5 2947 aaKnown RBP7.72□□□□□ -1.17
Pcdha1-202ENSMUST00000193839 D6Ertd527eA0A0N4SWI3 464 aa7.71□□□□□ -1.18
Pcdha1-202ENSMUST00000193839 BC029722A0A0N4SW31 51 aa7.68□□□□□ -1.18
Pcdha1-202ENSMUST00000193839 Camk2n1Q6QWF9 78 aa7.64□□□□□ -1.19
Pcdha1-202ENSMUST00000193839 Gm19426M0QWC7 77 aa7.62□□□□□ -1.19
Pcdha1-202ENSMUST00000193839 Lama5Q61001 3718 aa7.62□□□□□ -1.19
Pcdha1-202ENSMUST00000193839 Tenm1Q9WTS4 2731 aa7.61□□□□□ -1.19
Pcdha1-202ENSMUST00000193839 Fbn1Q61554 2873 aaKnown RBP7.6□□□□□ -1.19
Pcdha1-202ENSMUST00000193839 Tenm2Q9WTS5 2764 aa7.54□□□□□ -1.2
Pcdha1-202ENSMUST00000193839 Gm884A2A9H6 3643 aa7.54□□□□□ -1.2
Pcdha1-202ENSMUST00000193839 Smg1Q8BKX6 3658 aaKnown RBP7.51□□□□□ -1.21
Pcdha1-202ENSMUST00000193839 Gm40193A0A1B0GT39 78 aa7.47□□□□□ -1.21
Pcdha1-202ENSMUST00000193839 Gm5965D3Z724 196 aa7.45□□□□□ -1.22
Pcdha1-202ENSMUST00000193839 Ndufaf8A2AMZ4 74 aa7.44□□□□□ -1.22
Pcdha1-202ENSMUST00000193839 A930033H14RikG5E8X6 103 aa7.43□□□□□ -1.22
Pcdha1-202ENSMUST00000193839 Ank2Q8C8R3 3898 aa7.42□□□□□ -1.22
Pcdha1-202ENSMUST00000193839 Csmd1Q923L3 3564 aa7.42□□□□□ -1.22
Pcdha1-202ENSMUST00000193839 SpenQ62504 3644 aaKnown RBP7.4□□□□□ -1.22
Pcdha1-202ENSMUST00000193839 Gm20537G3UYK7 97 aa7.38□□□□□ -1.23
Pcdha1-202ENSMUST00000193839 2310079G19RikQ9D6L6 185 aa7.35□□□□□ -1.23
Pcdha1-202ENSMUST00000193839 VwfQ8CIZ8 2813 aa7.34□□□□□ -1.23
Pcdha1-202ENSMUST00000193839 Gm9918Q8BUR5 174 aa7.29□□□□□ -1.24
Pcdha1-202ENSMUST00000193839 Megf8P60882 2789 aa7.23□□□□□ -1.25
Pcdha1-202ENSMUST00000193839 Gm9112A2AI92 75 aa7.19□□□□□ -1.26
Pcdha1-202ENSMUST00000193839 2310057N15RikQ9D6T8 200 aa7.17□□□□□ -1.26
Pcdha1-202ENSMUST00000193839 Gm21887J3QQ04 176 aa7.16□□□□□ -1.26
Pcdha1-202ENSMUST00000193839 Gm17416Q30KP4 66 aa7.16□□□□□ -1.26
Pcdha1-202ENSMUST00000193839 Svep1A2AVA0 3567 aa7.13□□□□□ -1.27
Pcdha1-202ENSMUST00000193839 Col7a1Q63870 2944 aa7.13□□□□□ -1.27
Pcdha1-202ENSMUST00000193839 Muc6Q80T03 2850 aa7.12□□□□□ -1.27
Pcdha1-202ENSMUST00000193839 B930094E09RikQ8C4T2 136 aa7.1□□□□□ -1.27
Pcdha1-202ENSMUST00000193839 Gm9736A0A1W2P7N1 277 aa7.07□□□□□ -1.28
Pcdha1-202ENSMUST00000193839 Tnp1P10856 55 aa7.06□□□□□ -1.28
Pcdha1-202ENSMUST00000193839 Krtap19-5O08632 62 aa7.04□□□□□ -1.28
Pcdha1-202ENSMUST00000193839 Gm11939A2A592 99 aa7□□□□□ -1.29
Pcdha1-202ENSMUST00000193839 Gm17402F6Z0L5 76 aa7□□□□□ -1.29
Pcdha1-202ENSMUST00000193839 Cmya5Q70KF4 3739 aa6.99□□□□□ -1.29
Pcdha1-202ENSMUST00000193839 Muc4Q8JZM8 3443 aa6.98□□□□□ -1.29
Pcdha1-202ENSMUST00000193839 2210017I01RikA0A0A6YVV1 95 aa6.97□□□□□ -1.29
Pcdha1-202ENSMUST00000193839 Dnah14A0A140LIJ4 4489 aa6.92□□□□□ -1.3
Pcdha1-202ENSMUST00000193839 LystP97412 3788 aa6.83□□□□□ -1.32
Pcdha1-202ENSMUST00000193839 Csmd2V9GX34 3611 aa6.82□□□□□ -1.32
Pcdha1-202ENSMUST00000193839 Prm2P07978 107 aa6.79□□□□□ -1.32
Pcdha1-202ENSMUST00000193839 Krtap3-2Q9D638 99 aa6.78□□□□□ -1.32
Pcdha1-202ENSMUST00000193839 Krtap3-3Q9D7P0 99 aa6.78□□□□□ -1.32
Pcdha1-202ENSMUST00000193839 Huwe1Q7TMY8 4377 aaKnown RBP6.78□□□□□ -1.32
Pcdha1-202ENSMUST00000193839 Dnah17Q69Z23 4481 aa6.65□□□□□ -1.35
Pcdha1-202ENSMUST00000193839 Krtap13-1Q8K198 168 aa6.62□□□□□ -1.35
Pcdha1-202ENSMUST00000193839 BsnO88737 3942 aa6.6□□□□□ -1.35
Pcdha1-202ENSMUST00000193839 Vps13dB1ART2 4390 aa6.6□□□□□ -1.35
Pcdha1-202ENSMUST00000193839 Dnah5Q8VHE6 4621 aa6.56□□□□□ -1.36
Pcdha1-202ENSMUST00000193839 Stard9Q80TF6 4561 aa6.55□□□□□ -1.36
Pcdha1-202ENSMUST00000193839 Dnah10D3YYQ8 4591 aa6.54□□□□□ -1.36
Pcdha1-202ENSMUST00000193839 PlecQ9QXS1 4691 aaKnown RBP6.53□□□□□ -1.36
Pcdha1-202ENSMUST00000193839 Krtap3-1A2A591 98 aa6.52□□□□□ -1.37
Pcdha1-202ENSMUST00000193839 TnxbO35452 4006 aa6.51□□□□□ -1.37
Pcdha1-202ENSMUST00000193839 Xirp2Q4U4S6 3784 aa6.48□□□□□ -1.37
Pcdha1-202ENSMUST00000193839 Crct1Q6PAI5 102 aa6.43□□□□□ -1.38
Pcdha1-202ENSMUST00000193839 Gm10318A0A1W2P728 225 aa6.42□□□□□ -1.38
Pcdha1-202ENSMUST00000193839 Dync2h1Q45VK7 4306 aa6.4□□□□□ -1.38
Pcdha1-202ENSMUST00000193839 CubnQ9JLB4 3623 aa6.38□□□□□ -1.39
Pcdha1-202ENSMUST00000193839 Gm19668J3QMD1 248 aa6.37□□□□□ -1.39
Pcdha1-202ENSMUST00000193839 Dnah9B1AR51 4484 aa6.3□□□□□ -1.4
Pcdha1-202ENSMUST00000193839 Dnah11E9Q7N9 4488 aa6.29□□□□□ -1.4
Pcdha1-202ENSMUST00000193839 PrkdcP97313 4128 aa6.29□□□□□ -1.4
Pcdha1-202ENSMUST00000193839 Dync1h1Q9JHU4 4644 aaKnown RBP6.28□□□□□ -1.4
Pcdha1-202ENSMUST00000193839 4933428G20RikQ9D3X4 101 aa6.26□□□□□ -1.41
Pcdha1-202ENSMUST00000193839 Krtap1-5A2A590 122 aa6.25□□□□□ -1.41
Pcdha1-202ENSMUST00000193839 Dnah2P0C6F1 4456 aa6.2□□□□□ -1.42
Pcdha1-202ENSMUST00000193839 Hspg2Q05793 3707 aaKnown RBP6.18□□□□□ -1.42
Pcdha1-202ENSMUST00000193839 ApobE9Q414 4505 aa6.17□□□□□ -1.42
Pcdha1-202ENSMUST00000193839 Krtap7-1Q9D3I6 87 aa6.16□□□□□ -1.42
Pcdha1-202ENSMUST00000193839 Ryr1E9PZQ0 5035 aa6.15□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 76.9 ms