RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 DmdP11531 3678 aa7.32□□□□□ -1.24
Col6a3-208ENSMUST00000188587 Krtap13O88375 197 aa7.28□□□□□ -1.24
Col6a3-208ENSMUST00000188587 Wdfy3Q6VNB8 3508 aa7.28□□□□□ -1.24
Col6a3-208ENSMUST00000188587 Hivep1Q03172 2688 aa7.22□□□□□ -1.25
Col6a3-208ENSMUST00000188587 Gm9507D3Z5T3 223 aa7.22□□□□□ -1.25
Col6a3-208ENSMUST00000188587 Rps29P62274 56 aa7.21□□□□□ -1.26
Col6a3-208ENSMUST00000188587 LrbaQ9ESE1 2856 aa7.21□□□□□ -1.26
Col6a3-208ENSMUST00000188587 FlncQ8VHX6 2726 aaKnown RBP7.2□□□□□ -1.26
Col6a3-208ENSMUST00000188587 Tenm1Q9WTS4 2731 aa7.2□□□□□ -1.26
Col6a3-208ENSMUST00000188587 Celsr2Q9R0M0 2920 aa7.2□□□□□ -1.26
Col6a3-208ENSMUST00000188587 Pdzd2E9Q1M1 2796 aa7.18□□□□□ -1.26
Col6a3-208ENSMUST00000188587 Nf1Q04690 2841 aa7.18□□□□□ -1.26
Col6a3-208ENSMUST00000188587 Smg1Q8BKX6 3658 aaKnown RBP7.16□□□□□ -1.26
Col6a3-208ENSMUST00000188587 SpenQ62504 3644 aaKnown RBP7.16□□□□□ -1.26
Col6a3-208ENSMUST00000188587 Cox6b2Q80ZN9 88 aa7.15□□□□□ -1.27
Col6a3-208ENSMUST00000188587 FcgbpE9Q0B5 2583 aa7.14□□□□□ -1.27
Col6a3-208ENSMUST00000188587 Krtap14O08640 167 aa7.13□□□□□ -1.27
Col6a3-208ENSMUST00000188587 Cmya5Q70KF4 3739 aa7.13□□□□□ -1.27
Col6a3-208ENSMUST00000188587 TgO08710 2766 aa7.12□□□□□ -1.27
Col6a3-208ENSMUST00000188587 Csmd1Q923L3 3564 aa7.1□□□□□ -1.27
Col6a3-208ENSMUST00000188587 Tnp2P11378 117 aa7.1□□□□□ -1.27
Col6a3-208ENSMUST00000188587 Krtap10-4Q08EG8 221 aa7.1□□□□□ -1.27
Col6a3-208ENSMUST00000188587 1700042G07RikB1AUF7 90 aa7.09□□□□□ -1.27
Col6a3-208ENSMUST00000188587 Gm2310J3QNJ2 377 aa7.08□□□□□ -1.28
Col6a3-208ENSMUST00000188587 4933415A04RikQ9D443 101 aa7.07□□□□□ -1.28
Col6a3-208ENSMUST00000188587 Gm21887J3QQ04 176 aa7.05□□□□□ -1.28
Col6a3-208ENSMUST00000188587 Zfhx4Q9JJN2 3550 aa7.04□□□□□ -1.28
Col6a3-208ENSMUST00000188587 2310061N02RikQ9D6S9 174 aa7□□□□□ -1.29
Col6a3-208ENSMUST00000188587 Krtap10-10A0A1W2P7T6 217 aa6.99□□□□□ -1.29
Col6a3-208ENSMUST00000188587 Tnp1P10856 55 aa6.99□□□□□ -1.29
Col6a3-208ENSMUST00000188587 RelnQ60841 3461 aa6.98□□□□□ -1.29
Col6a3-208ENSMUST00000188587 Tenm4Q3UHK6 2771 aa6.98□□□□□ -1.29
Col6a3-208ENSMUST00000188587 OtogO55225 2910 aa6.94□□□□□ -1.3
Col6a3-208ENSMUST00000188587 Lama5Q61001 3718 aa6.91□□□□□ -1.3
Col6a3-208ENSMUST00000188587 D6Ertd527eA0A0N4SWI3 464 aa6.89□□□□□ -1.31
Col6a3-208ENSMUST00000188587 Ndufaf8A2AMZ4 74 aa6.87□□□□□ -1.31
Col6a3-208ENSMUST00000188587 Muc5acE9QAQ8 3455 aa6.86□□□□□ -1.31
Col6a3-208ENSMUST00000188587 2310057N15RikQ9D6T8 200 aa6.86□□□□□ -1.31
Col6a3-208ENSMUST00000188587 Gm2696A0A1W2P709 240 aa6.85□□□□□ -1.31
Col6a3-208ENSMUST00000188587 Csmd2V9GX34 3611 aa6.84□□□□□ -1.31
Col6a3-208ENSMUST00000188587 Gm884A2A9H6 3643 aa6.81□□□□□ -1.32
Col6a3-208ENSMUST00000188587 Gm5965D3Z724 196 aa6.81□□□□□ -1.32
Col6a3-208ENSMUST00000188587 Gm40193A0A1B0GT39 78 aa6.8□□□□□ -1.32
Col6a3-208ENSMUST00000188587 Tenm3Q9WTS6 2715 aa6.79□□□□□ -1.32
Col6a3-208ENSMUST00000188587 Ank2Q8C8R3 3898 aa6.76□□□□□ -1.33
Col6a3-208ENSMUST00000188587 Gm9112A2AI92 75 aa6.73□□□□□ -1.33
Col6a3-208ENSMUST00000188587 VwfQ8CIZ8 2813 aa6.72□□□□□ -1.33
Col6a3-208ENSMUST00000188587 A930033H14RikG5E8X6 103 aa6.7□□□□□ -1.34
Col6a3-208ENSMUST00000188587 Helz2E9QAM5 2947 aaKnown RBP6.66□□□□□ -1.34
Col6a3-208ENSMUST00000188587 SmcpP15265 143 aa6.62□□□□□ -1.35
Col6a3-208ENSMUST00000188587 B930094E09RikQ8C4T2 136 aa6.57□□□□□ -1.36
Col6a3-208ENSMUST00000188587 Gm20537G3UYK7 97 aa6.55□□□□□ -1.36
Col6a3-208ENSMUST00000188587 Megf8P60882 2789 aa6.55□□□□□ -1.36
Col6a3-208ENSMUST00000188587 Col7a1Q63870 2944 aa6.5□□□□□ -1.37
Col6a3-208ENSMUST00000188587 Fbn1Q61554 2873 aaKnown RBP6.47□□□□□ -1.37
Col6a3-208ENSMUST00000188587 Tenm2Q9WTS5 2764 aa6.46□□□□□ -1.38
Col6a3-208ENSMUST00000188587 Svep1A2AVA0 3567 aa6.39□□□□□ -1.39
Col6a3-208ENSMUST00000188587 Prm2P07978 107 aa6.38□□□□□ -1.39
Col6a3-208ENSMUST00000188587 Gm9918Q8BUR5 174 aa6.31□□□□□ -1.4
Col6a3-208ENSMUST00000188587 Gm17416Q30KP4 66 aa6.29□□□□□ -1.4
Col6a3-208ENSMUST00000188587 LystP97412 3788 aa6.28□□□□□ -1.4
Col6a3-208ENSMUST00000188587 2310079G19RikQ9D6L6 185 aa6.27□□□□□ -1.41
Col6a3-208ENSMUST00000188587 Gm17402F6Z0L5 76 aa6.24□□□□□ -1.41
Col6a3-208ENSMUST00000188587 BsnO88737 3942 aa6.23□□□□□ -1.41
Col6a3-208ENSMUST00000188587 CubnQ9JLB4 3623 aa6.22□□□□□ -1.41
Col6a3-208ENSMUST00000188587 Gm9736A0A1W2P7N1 277 aa6.22□□□□□ -1.41
Col6a3-208ENSMUST00000188587 Xirp2Q4U4S6 3784 aa6.21□□□□□ -1.41
Col6a3-208ENSMUST00000188587 4933428G20RikQ9D3X4 101 aa6.2□□□□□ -1.42
Col6a3-208ENSMUST00000188587 Csmd3Q80T79 3707 aa6.2□□□□□ -1.42
Col6a3-208ENSMUST00000188587 Muc4Q8JZM8 3443 aa6.2□□□□□ -1.42
Col6a3-208ENSMUST00000188587 2210017I01RikA0A0A6YVV1 95 aa6.18□□□□□ -1.42
Col6a3-208ENSMUST00000188587 Hspg2Q05793 3707 aaKnown RBP6.17□□□□□ -1.42
Col6a3-208ENSMUST00000188587 Gm19668J3QMD1 248 aa6.11□□□□□ -1.43
Col6a3-208ENSMUST00000188587 Muc6Q80T03 2850 aa6.07□□□□□ -1.44
Col6a3-208ENSMUST00000188587 Gm10318A0A1W2P728 225 aa5.98□□□□□ -1.45
Col6a3-208ENSMUST00000188587 Crct1Q6PAI5 102 aa5.88□□□□□ -1.47
Col6a3-208ENSMUST00000188587 Krtap13-1Q8K198 168 aa5.85□□□□□ -1.47
Col6a3-208ENSMUST00000188587 Krtap19-5O08632 62 aa5.81□□□□□ -1.48
Col6a3-208ENSMUST00000188587 Gm11939A2A592 99 aa5.74□□□□□ -1.49
Col6a3-208ENSMUST00000188587 Gm6358A0A087WPH4 74 aa5.71□□□□□ -1.5
Col6a3-208ENSMUST00000188587 Huwe1Q7TMY8 4377 aaKnown RBP5.67□□□□□ -1.5
Col6a3-208ENSMUST00000188587 Dnah3Q8BW94 4083 aa5.62□□□□□ -1.51
Col6a3-208ENSMUST00000188587 Vps13bQ80TY5 3993 aa5.61□□□□□ -1.51
Col6a3-208ENSMUST00000188587 PrkdcP97313 4128 aa5.61□□□□□ -1.51
Col6a3-208ENSMUST00000188587 Kmt2aP55200 3966 aa5.6□□□□□ -1.51
Col6a3-208ENSMUST00000188587 Dnah7bL7N1Y0 4068 aa5.6□□□□□ -1.51
Col6a3-208ENSMUST00000188587 Krtap3-1A2A591 98 aa5.59□□□□□ -1.51
Col6a3-208ENSMUST00000188587 Sprr2kO70562 68 aa5.53□□□□□ -1.52
Col6a3-208ENSMUST00000188587 Krtap8-1O08633 61 aa5.49□□□□□ -1.53
Col6a3-208ENSMUST00000188587 Dnah6E9Q0B6 4144 aa5.48□□□□□ -1.53
Col6a3-208ENSMUST00000188587 Dnah7cA0A087WR13 4024 aa5.47□□□□□ -1.53
Col6a3-208ENSMUST00000188587 Krtap19-9aF8WH65 55 aa5.44□□□□□ -1.54
Col6a3-208ENSMUST00000188587 Krtap3-2Q9D638 99 aa5.43□□□□□ -1.54
Col6a3-208ENSMUST00000188587 Krtap3-3Q9D7P0 99 aa5.43□□□□□ -1.54
Col6a3-208ENSMUST00000188587 Dnah7aE9Q0T8 4024 aa5.42□□□□□ -1.54
Col6a3-208ENSMUST00000188587 Krtap7-1Q9D3I6 87 aa5.38□□□□□ -1.55
Col6a3-208ENSMUST00000188587 TnxbO35452 4006 aa5.34□□□□□ -1.55
Col6a3-208ENSMUST00000188587 Sprr2gO70558 76 aa5.3□□□□□ -1.56
Col6a3-208ENSMUST00000188587 Gm18596A0A1W2P860 280 aa5.3□□□□□ -1.56
Col6a3-208ENSMUST00000188587 Krtap1-5A2A590 122 aa5.29□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms