RNA–Protein interactions for RNA: ENSMUST00000176778.7

Cux1-212, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cux1, Length 5,520 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-212ENSMUST00000176778 A730071L15RikQ8C4X0 137 aa8.89□□□□□ -0.99
Cux1-212ENSMUST00000176778 Rps29P62274 56 aa8.88□□□□□ -0.99
Cux1-212ENSMUST00000176778 LrbaQ9ESE1 2856 aa8.88□□□□□ -0.99
Cux1-212ENSMUST00000176778 Nf1Q04690 2841 aa8.87□□□□□ -0.99
Cux1-212ENSMUST00000176778 Srrm2Q8BTI8 2703 aaKnown RBP8.86□□□□□ -0.99
Cux1-212ENSMUST00000176778 Chd9Q8BYH8 2885 aa8.84□□□□□ -0.99
Cux1-212ENSMUST00000176778 Cox6b2Q80ZN9 88 aa8.8□□□□□ -1
Cux1-212ENSMUST00000176778 Krtap10-4Q08EG8 221 aa8.78□□□□□ -1
Cux1-212ENSMUST00000176778 DmdP11531 3678 aa8.77□□□□□ -1.01
Cux1-212ENSMUST00000176778 RelnQ60841 3461 aa8.77□□□□□ -1.01
Cux1-212ENSMUST00000176778 Pdzd2E9Q1M1 2796 aa8.74□□□□□ -1.01
Cux1-212ENSMUST00000176778 Gm2310J3QNJ2 377 aa8.73□□□□□ -1.01
Cux1-212ENSMUST00000176778 Krtap14O08640 167 aa8.72□□□□□ -1.01
Cux1-212ENSMUST00000176778 Dchs1E9PVD3 3291 aa8.71□□□□□ -1.02
Cux1-212ENSMUST00000176778 SpegQ62407 3262 aa8.69□□□□□ -1.02
Cux1-212ENSMUST00000176778 Krtap10-10A0A1W2P7T6 217 aa8.69□□□□□ -1.02
Cux1-212ENSMUST00000176778 Tnp2P11378 117 aa8.68□□□□□ -1.02
Cux1-212ENSMUST00000176778 Vps13cQ8BX70 3748 aa8.66□□□□□ -1.02
Cux1-212ENSMUST00000176778 ApcQ61315 2845 aa8.64□□□□□ -1.03
Cux1-212ENSMUST00000176778 Myo15aQ9QZZ4 3511 aa8.6□□□□□ -1.03
Cux1-212ENSMUST00000176778 Gm21887J3QQ04 176 aa8.58□□□□□ -1.04
Cux1-212ENSMUST00000176778 TgO08710 2766 aa8.55□□□□□ -1.04
Cux1-212ENSMUST00000176778 Zfhx4Q9JJN2 3550 aa8.54□□□□□ -1.04
Cux1-212ENSMUST00000176778 4933415A04RikQ9D443 101 aa8.53□□□□□ -1.04
Cux1-212ENSMUST00000176778 1700042G07RikB1AUF7 90 aa8.52□□□□□ -1.05
Cux1-212ENSMUST00000176778 OtogO55225 2910 aa8.51□□□□□ -1.05
Cux1-212ENSMUST00000176778 Akap9Q70FJ1 3797 aa8.51□□□□□ -1.05
Cux1-212ENSMUST00000176778 Tnp1P10856 55 aa8.47□□□□□ -1.05
Cux1-212ENSMUST00000176778 Gm2696A0A1W2P709 240 aa8.46□□□□□ -1.06
Cux1-212ENSMUST00000176778 Tenm1Q9WTS4 2731 aa8.39□□□□□ -1.07
Cux1-212ENSMUST00000176778 SmcpP15265 143 aa8.38□□□□□ -1.07
Cux1-212ENSMUST00000176778 D6Ertd527eA0A0N4SWI3 464 aa8.38□□□□□ -1.07
Cux1-212ENSMUST00000176778 Fbn1Q61554 2873 aaKnown RBP8.37□□□□□ -1.07
Cux1-212ENSMUST00000176778 2310057N15RikQ9D6T8 200 aa8.36□□□□□ -1.07
Cux1-212ENSMUST00000176778 Muc5acE9QAQ8 3455 aa8.35□□□□□ -1.07
Cux1-212ENSMUST00000176778 Gm40193A0A1B0GT39 78 aa8.31□□□□□ -1.08
Cux1-212ENSMUST00000176778 Gm5965D3Z724 196 aa8.31□□□□□ -1.08
Cux1-212ENSMUST00000176778 Lama5Q61001 3718 aa8.28□□□□□ -1.08
Cux1-212ENSMUST00000176778 Helz2E9QAM5 2947 aaKnown RBP8.28□□□□□ -1.08
Cux1-212ENSMUST00000176778 Ank2Q8C8R3 3898 aa8.26□□□□□ -1.09
Cux1-212ENSMUST00000176778 Ndufaf8A2AMZ4 74 aa8.25□□□□□ -1.09
Cux1-212ENSMUST00000176778 Zfhx3Q61329 3726 aa8.24□□□□□ -1.09
Cux1-212ENSMUST00000176778 Tenm2Q9WTS5 2764 aa8.23□□□□□ -1.09
Cux1-212ENSMUST00000176778 A930033H14RikG5E8X6 103 aa8.19□□□□□ -1.1
Cux1-212ENSMUST00000176778 Megf8P60882 2789 aa8.13□□□□□ -1.11
Cux1-212ENSMUST00000176778 Gm9112A2AI92 75 aa8.06□□□□□ -1.12
Cux1-212ENSMUST00000176778 Smg1Q8BKX6 3658 aaKnown RBP8.03□□□□□ -1.12
Cux1-212ENSMUST00000176778 Gm884A2A9H6 3643 aa8□□□□□ -1.13
Cux1-212ENSMUST00000176778 Gm9918Q8BUR5 174 aa7.99□□□□□ -1.13
Cux1-212ENSMUST00000176778 VwfQ8CIZ8 2813 aa7.97□□□□□ -1.13
Cux1-212ENSMUST00000176778 Col7a1Q63870 2944 aa7.92□□□□□ -1.14
Cux1-212ENSMUST00000176778 B930094E09RikQ8C4T2 136 aa7.92□□□□□ -1.14
Cux1-212ENSMUST00000176778 Muc6Q80T03 2850 aa7.85□□□□□ -1.15
Cux1-212ENSMUST00000176778 Gm20537G3UYK7 97 aa7.85□□□□□ -1.15
Cux1-212ENSMUST00000176778 SpenQ62504 3644 aaKnown RBP7.82□□□□□ -1.16
Cux1-212ENSMUST00000176778 Gm17416Q30KP4 66 aa7.8□□□□□ -1.16
Cux1-212ENSMUST00000176778 Csmd1Q923L3 3564 aa7.79□□□□□ -1.16
Cux1-212ENSMUST00000176778 Prm2P07978 107 aa7.71□□□□□ -1.18
Cux1-212ENSMUST00000176778 Krtap19-5O08632 62 aa7.7□□□□□ -1.18
Cux1-212ENSMUST00000176778 Svep1A2AVA0 3567 aa7.69□□□□□ -1.18
Cux1-212ENSMUST00000176778 Gm9736A0A1W2P7N1 277 aa7.68□□□□□ -1.18
Cux1-212ENSMUST00000176778 Gm17402F6Z0L5 76 aa7.66□□□□□ -1.18
Cux1-212ENSMUST00000176778 2210017I01RikA0A0A6YVV1 95 aa7.62□□□□□ -1.19
Cux1-212ENSMUST00000176778 Cmya5Q70KF4 3739 aa7.6□□□□□ -1.19
Cux1-212ENSMUST00000176778 Muc4Q8JZM8 3443 aa7.59□□□□□ -1.19
Cux1-212ENSMUST00000176778 Dnah14A0A140LIJ4 4489 aa7.58□□□□□ -1.2
Cux1-212ENSMUST00000176778 4933428G20RikQ9D3X4 101 aa7.56□□□□□ -1.2
Cux1-212ENSMUST00000176778 2310079G19RikQ9D6L6 185 aa7.56□□□□□ -1.2
Cux1-212ENSMUST00000176778 Huwe1Q7TMY8 4377 aaKnown RBP7.47□□□□□ -1.21
Cux1-212ENSMUST00000176778 LystP97412 3788 aa7.46□□□□□ -1.21
Cux1-212ENSMUST00000176778 Gm11939A2A592 99 aa7.45□□□□□ -1.22
Cux1-212ENSMUST00000176778 Gm10318A0A1W2P728 225 aa7.4□□□□□ -1.22
Cux1-212ENSMUST00000176778 Gm19668J3QMD1 248 aa7.39□□□□□ -1.23
Cux1-212ENSMUST00000176778 TnxbO35452 4006 aa7.36□□□□□ -1.23
Cux1-212ENSMUST00000176778 Csmd2V9GX34 3611 aa7.36□□□□□ -1.23
Cux1-212ENSMUST00000176778 Dnah17Q69Z23 4481 aa7.31□□□□□ -1.24
Cux1-212ENSMUST00000176778 Vps13dB1ART2 4390 aa7.28□□□□□ -1.24
Cux1-212ENSMUST00000176778 Crct1Q6PAI5 102 aa7.24□□□□□ -1.25
Cux1-212ENSMUST00000176778 PlecQ9QXS1 4691 aaKnown RBP7.22□□□□□ -1.25
Cux1-212ENSMUST00000176778 BsnO88737 3942 aa7.22□□□□□ -1.25
Cux1-212ENSMUST00000176778 Stard9Q80TF6 4561 aa7.19□□□□□ -1.26
Cux1-212ENSMUST00000176778 Dnah5Q8VHE6 4621 aa7.18□□□□□ -1.26
Cux1-212ENSMUST00000176778 Krtap13-1Q8K198 168 aa7.13□□□□□ -1.27
Cux1-212ENSMUST00000176778 Krtap3-2Q9D638 99 aa7.12□□□□□ -1.27
Cux1-212ENSMUST00000176778 Krtap3-3Q9D7P0 99 aa7.12□□□□□ -1.27
Cux1-212ENSMUST00000176778 Dync2h1Q45VK7 4306 aa7.11□□□□□ -1.27
Cux1-212ENSMUST00000176778 Dnah10D3YYQ8 4591 aa7.09□□□□□ -1.28
Cux1-212ENSMUST00000176778 PrkdcP97313 4128 aa7.06□□□□□ -1.28
Cux1-212ENSMUST00000176778 Dync1h1Q9JHU4 4644 aaKnown RBP7□□□□□ -1.29
Cux1-212ENSMUST00000176778 Xirp2Q4U4S6 3784 aa6.98□□□□□ -1.29
Cux1-212ENSMUST00000176778 Ryr1E9PZQ0 5035 aa6.96□□□□□ -1.3
Cux1-212ENSMUST00000176778 Gm18596A0A1W2P860 280 aa6.93□□□□□ -1.3
Cux1-212ENSMUST00000176778 Gm6358A0A087WPH4 74 aa6.9□□□□□ -1.3
Cux1-212ENSMUST00000176778 Pkd1O08852 4293 aa6.89□□□□□ -1.31
Cux1-212ENSMUST00000176778 Dnah9B1AR51 4484 aa6.88□□□□□ -1.31
Cux1-212ENSMUST00000176778 Krtap3-1A2A591 98 aa6.86□□□□□ -1.31
Cux1-212ENSMUST00000176778 Dnah3Q8BW94 4083 aa6.84□□□□□ -1.31
Cux1-212ENSMUST00000176778 Dnah11E9Q7N9 4488 aa6.83□□□□□ -1.32
Cux1-212ENSMUST00000176778 CubnQ9JLB4 3623 aa6.8□□□□□ -1.32
Cux1-212ENSMUST00000176778 Lce1mQ9CR91 182 aa6.8□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 53.8 ms