RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Srrm2Q8BTI8 2703 aaKnown RBP10.12□□□□□ -0.79
Ebf3-204ENSMUST00000169486 2310050C09RikG5E8Z3 280 aa10.11□□□□□ -0.79
Ebf3-204ENSMUST00000169486 Romo1P60603 79 aa10.1□□□□□ -0.79
Ebf3-204ENSMUST00000169486 Gm10382Q3V0T5 144 aa10.03□□□□□ -0.8
Ebf3-204ENSMUST00000169486 Trank1Q8BV79 2999 aa10.02□□□□□ -0.8
Ebf3-204ENSMUST00000169486 Gm9507D3Z5T3 223 aa10□□□□□ -0.81
Ebf3-204ENSMUST00000169486 Krtap14O08640 167 aa9.98□□□□□ -0.81
Ebf3-204ENSMUST00000169486 2310061N02RikQ9D6S9 174 aa9.98□□□□□ -0.81
Ebf3-204ENSMUST00000169486 Vps13cQ8BX70 3748 aa9.98□□□□□ -0.81
Ebf3-204ENSMUST00000169486 Gm5767A0A0J9YTU8 78 aa9.97□□□□□ -0.81
Ebf3-204ENSMUST00000169486 Camk2n1Q6QWF9 78 aa9.95□□□□□ -0.82
Ebf3-204ENSMUST00000169486 Nf1Q04690 2841 aa9.92□□□□□ -0.82
Ebf3-204ENSMUST00000169486 Akap9Q70FJ1 3797 aa9.92□□□□□ -0.82
Ebf3-204ENSMUST00000169486 Krtap10-4Q08EG8 221 aa9.91□□□□□ -0.82
Ebf3-204ENSMUST00000169486 Pdzd2E9Q1M1 2796 aa9.87□□□□□ -0.83
Ebf3-204ENSMUST00000169486 BC029722A0A0N4SW31 51 aa9.84□□□□□ -0.83
Ebf3-204ENSMUST00000169486 Tenm4Q3UHK6 2771 aa9.84□□□□□ -0.83
Ebf3-204ENSMUST00000169486 Helz2E9QAM5 2947 aaKnown RBP9.83□□□□□ -0.84
Ebf3-204ENSMUST00000169486 Fam229aB2KGE5 128 aa9.83□□□□□ -0.84
Ebf3-204ENSMUST00000169486 Cox6b2Q80ZN9 88 aa9.81□□□□□ -0.84
Ebf3-204ENSMUST00000169486 LrbaQ9ESE1 2856 aa9.79□□□□□ -0.84
Ebf3-204ENSMUST00000169486 Gm21887J3QQ04 176 aa9.77□□□□□ -0.84
Ebf3-204ENSMUST00000169486 Zfhx3Q61329 3726 aa9.77□□□□□ -0.85
Ebf3-204ENSMUST00000169486 Tnp2P11378 117 aa9.76□□□□□ -0.85
Ebf3-204ENSMUST00000169486 Krtap10-10A0A1W2P7T6 217 aa9.75□□□□□ -0.85
Ebf3-204ENSMUST00000169486 Gm19426M0QWC7 77 aa9.75□□□□□ -0.85
Ebf3-204ENSMUST00000169486 D6Ertd527eA0A0N4SWI3 464 aa9.73□□□□□ -0.85
Ebf3-204ENSMUST00000169486 Tenm3Q9WTS6 2715 aa9.72□□□□□ -0.85
Ebf3-204ENSMUST00000169486 Zfhx4Q9JJN2 3550 aa9.67□□□□□ -0.86
Ebf3-204ENSMUST00000169486 Gm9112A2AI92 75 aa9.63□□□□□ -0.87
Ebf3-204ENSMUST00000169486 SpenQ62504 3644 aaKnown RBP9.63□□□□□ -0.87
Ebf3-204ENSMUST00000169486 Ndufaf8A2AMZ4 74 aa9.63□□□□□ -0.87
Ebf3-204ENSMUST00000169486 Csmd1Q923L3 3564 aa9.61□□□□□ -0.87
Ebf3-204ENSMUST00000169486 Rps29P62274 56 aa9.6□□□□□ -0.87
Ebf3-204ENSMUST00000169486 Smg1Q8BKX6 3658 aaKnown RBP9.58□□□□□ -0.88
Ebf3-204ENSMUST00000169486 Lama5Q61001 3718 aa9.53□□□□□ -0.88
Ebf3-204ENSMUST00000169486 Gm884A2A9H6 3643 aa9.53□□□□□ -0.88
Ebf3-204ENSMUST00000169486 Muc5acE9QAQ8 3455 aa9.51□□□□□ -0.89
Ebf3-204ENSMUST00000169486 Gm2696A0A1W2P709 240 aa9.47□□□□□ -0.89
Ebf3-204ENSMUST00000169486 Tenm1Q9WTS4 2731 aa9.46□□□□□ -0.9
Ebf3-204ENSMUST00000169486 Gm20537G3UYK7 97 aa9.33□□□□□ -0.92
Ebf3-204ENSMUST00000169486 OtogO55225 2910 aa9.29□□□□□ -0.92
Ebf3-204ENSMUST00000169486 Gm5965D3Z724 196 aa9.26□□□□□ -0.93
Ebf3-204ENSMUST00000169486 Prm2P07978 107 aa9.25□□□□□ -0.93
Ebf3-204ENSMUST00000169486 Svep1A2AVA0 3567 aa9.16□□□□□ -0.94
Ebf3-204ENSMUST00000169486 2310079G19RikQ9D6L6 185 aa9.13□□□□□ -0.95
Ebf3-204ENSMUST00000169486 Tenm2Q9WTS5 2764 aa9.11□□□□□ -0.95
Ebf3-204ENSMUST00000169486 A930033H14RikG5E8X6 103 aa9.1□□□□□ -0.95
Ebf3-204ENSMUST00000169486 Megf8P60882 2789 aa9.08□□□□□ -0.96
Ebf3-204ENSMUST00000169486 Gm40193A0A1B0GT39 78 aa9.04□□□□□ -0.96
Ebf3-204ENSMUST00000169486 2310057N15RikQ9D6T8 200 aa9.04□□□□□ -0.96
Ebf3-204ENSMUST00000169486 Cmya5Q70KF4 3739 aa9□□□□□ -0.97
Ebf3-204ENSMUST00000169486 Muc4Q8JZM8 3443 aa8.96□□□□□ -0.97
Ebf3-204ENSMUST00000169486 Tnp1P10856 55 aa8.96□□□□□ -0.98
Ebf3-204ENSMUST00000169486 B930094E09RikQ8C4T2 136 aa8.96□□□□□ -0.98
Ebf3-204ENSMUST00000169486 VwfQ8CIZ8 2813 aa8.94□□□□□ -0.98
Ebf3-204ENSMUST00000169486 Fbn1Q61554 2873 aaKnown RBP8.93□□□□□ -0.98
Ebf3-204ENSMUST00000169486 Gm17416Q30KP4 66 aa8.72□□□□□ -1.01
Ebf3-204ENSMUST00000169486 Ank2Q8C8R3 3898 aa8.71□□□□□ -1.02
Ebf3-204ENSMUST00000169486 Col7a1Q63870 2944 aa8.69□□□□□ -1.02
Ebf3-204ENSMUST00000169486 Gm9736A0A1W2P7N1 277 aa8.68□□□□□ -1.02
Ebf3-204ENSMUST00000169486 Csmd2V9GX34 3611 aa8.65□□□□□ -1.02
Ebf3-204ENSMUST00000169486 2210017I01RikA0A0A6YVV1 95 aa8.61□□□□□ -1.03
Ebf3-204ENSMUST00000169486 Gm11939A2A592 99 aa8.49□□□□□ -1.05
Ebf3-204ENSMUST00000169486 Gm17402F6Z0L5 76 aa8.43□□□□□ -1.06
Ebf3-204ENSMUST00000169486 LystP97412 3788 aa8.38□□□□□ -1.07
Ebf3-204ENSMUST00000169486 Muc6Q80T03 2850 aa8.37□□□□□ -1.07
Ebf3-204ENSMUST00000169486 Gm9918Q8BUR5 174 aa8.36□□□□□ -1.07
Ebf3-204ENSMUST00000169486 Krtap3-2Q9D638 99 aa8.34□□□□□ -1.07
Ebf3-204ENSMUST00000169486 Krtap3-3Q9D7P0 99 aa8.34□□□□□ -1.07
Ebf3-204ENSMUST00000169486 CubnQ9JLB4 3623 aa8.26□□□□□ -1.09
Ebf3-204ENSMUST00000169486 Gm10318A0A1W2P728 225 aa8.25□□□□□ -1.09
Ebf3-204ENSMUST00000169486 Krtap13-1Q8K198 168 aa8.19□□□□□ -1.1
Ebf3-204ENSMUST00000169486 Dnah14A0A140LIJ4 4489 aa8.18□□□□□ -1.1
Ebf3-204ENSMUST00000169486 Krtap19-5O08632 62 aa8.17□□□□□ -1.1
Ebf3-204ENSMUST00000169486 Krtap3-1A2A591 98 aa8.13□□□□□ -1.11
Ebf3-204ENSMUST00000169486 Xirp2Q4U4S6 3784 aa8.13□□□□□ -1.11
Ebf3-204ENSMUST00000169486 BsnO88737 3942 aa8.12□□□□□ -1.11
Ebf3-204ENSMUST00000169486 Gm19668J3QMD1 248 aa8.11□□□□□ -1.11
Ebf3-204ENSMUST00000169486 Crct1Q6PAI5 102 aa8.03□□□□□ -1.12
Ebf3-204ENSMUST00000169486 Huwe1Q7TMY8 4377 aaKnown RBP7.93□□□□□ -1.14
Ebf3-204ENSMUST00000169486 Hspg2Q05793 3707 aaKnown RBP7.84□□□□□ -1.15
Ebf3-204ENSMUST00000169486 4933428G20RikQ9D3X4 101 aa7.82□□□□□ -1.16
Ebf3-204ENSMUST00000169486 Dnah10D3YYQ8 4591 aa7.79□□□□□ -1.16
Ebf3-204ENSMUST00000169486 Dnah17Q69Z23 4481 aa7.77□□□□□ -1.17
Ebf3-204ENSMUST00000169486 Csmd3Q80T79 3707 aa7.67□□□□□ -1.18
Ebf3-204ENSMUST00000169486 PlecQ9QXS1 4691 aaKnown RBP7.63□□□□□ -1.19
Ebf3-204ENSMUST00000169486 Dnah5Q8VHE6 4621 aa7.63□□□□□ -1.19
Ebf3-204ENSMUST00000169486 Krtap7-1Q9D3I6 87 aa7.62□□□□□ -1.19
Ebf3-204ENSMUST00000169486 Dnah7bL7N1Y0 4068 aa7.59□□□□□ -1.19
Ebf3-204ENSMUST00000169486 Dnah11E9Q7N9 4488 aa7.57□□□□□ -1.2
Ebf3-204ENSMUST00000169486 Vps13dB1ART2 4390 aa7.55□□□□□ -1.2
Ebf3-204ENSMUST00000169486 Sprr2a3Q4KL71 83 aa7.52□□□□□ -1.21
Ebf3-204ENSMUST00000169486 Sprr2a1Q9CQK8 83 aa7.52□□□□□ -1.21
Ebf3-204ENSMUST00000169486 Dnah9B1AR51 4484 aa7.49□□□□□ -1.21
Ebf3-204ENSMUST00000169486 Stard9Q80TF6 4561 aa7.46□□□□□ -1.21
Ebf3-204ENSMUST00000169486 Krtap1-5A2A590 122 aa7.46□□□□□ -1.21
Ebf3-204ENSMUST00000169486 TnxbO35452 4006 aa7.45□□□□□ -1.22
Ebf3-204ENSMUST00000169486 Dync2h1Q45VK7 4306 aa7.36□□□□□ -1.23
Ebf3-204ENSMUST00000169486 Dnah6E9Q0B6 4144 aa7.35□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 59.3 ms