RNA–Protein interactions for RNA: ENSMUST00000162439.7

Shox2-204, Transcript of Short stature homeobox protein 2, mousemouse

TSL 1 (best) BASIC

Gene Shox2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-204ENSMUST00000162439 4930524J08RikQ9CUJ5 163 aa11.42□□□□□ -0.58
Shox2-204ENSMUST00000162439 CenpwQ3URR0 86 aa11.38□□□□□ -0.59
Shox2-204ENSMUST00000162439 Tac4Q99N14 128 aa11.37□□□□□ -0.59
Shox2-204ENSMUST00000162439 Fam229aB2KGE5 128 aa11.36□□□□□ -0.59
Shox2-204ENSMUST00000162439 C130032M10RikQ8C888 123 aa11.35□□□□□ -0.59
Shox2-204ENSMUST00000162439 Tma7Q8K003 64 aaKnown RBP11.34□□□□□ -0.59
Shox2-204ENSMUST00000162439 Igkv3-3A0A140T8Q0 119 aa11.33□□□□□ -0.6
Shox2-204ENSMUST00000162439 Ube2v1Q9CZY3 147 aa11.31□□□□□ -0.6
Shox2-204ENSMUST00000162439 Defa21Q8C1P2 93 aa11.29□□□□□ -0.6
Shox2-204ENSMUST00000162439 7530416G11RikJ3QJX6 159 aa11.28□□□□□ -0.6
Shox2-204ENSMUST00000162439 Gm44790A0A0N4SV91 103 aa11.27□□□□□ -0.61
Shox2-204ENSMUST00000162439 Smim13E9Q942 88 aa11.27□□□□□ -0.61
Shox2-204ENSMUST00000162439 Rnase13Q5GAM7 153 aa11.24□□□□□ -0.61
Shox2-204ENSMUST00000162439 Igkv8-19A0A0G2JFN8 121 aa11.22□□□□□ -0.61
Shox2-204ENSMUST00000162439 Sprr2jO70561 109 aa11.22□□□□□ -0.61
Shox2-204ENSMUST00000162439 Igkv8-27A0A0G2JF28 120 aa11.21□□□□□ -0.61
Shox2-204ENSMUST00000162439 Gm11555B1AQ89 175 aa11.21□□□□□ -0.61
Shox2-204ENSMUST00000162439 Ccl17F6R5P4 103 aa11.2□□□□□ -0.62
Shox2-204ENSMUST00000162439 Trav14d-3-dv8A0A075B619 120 aa11.18□□□□□ -0.62
Shox2-204ENSMUST00000162439 Cox6cQ9CPQ1 76 aa11.15□□□□□ -0.62
Shox2-204ENSMUST00000162439 Gm11596B1AQB0 205 aa11.14□□□□□ -0.63
Shox2-204ENSMUST00000162439 Gm10135F6TEE5 83 aa11.14□□□□□ -0.63
Shox2-204ENSMUST00000162439 Tmem213Q08EA8 116 aa11.13□□□□□ -0.63
Shox2-204ENSMUST00000162439 UqcrqQ9CQ69 82 aa11.12□□□□□ -0.63
Shox2-204ENSMUST00000162439 Rbm3O89086 153 aaKnown RBP11.1□□□□□ -0.63
Shox2-204ENSMUST00000162439 Acyp1P56376 99 aa11.09□□□□□ -0.63
Shox2-204ENSMUST00000162439 Muc5bE9Q5I3 4800 aa11.08□□□□□ -0.64
Shox2-204ENSMUST00000162439 Gm20604F8WIA3 75 aa11.07□□□□□ -0.64
Shox2-204ENSMUST00000162439 Gm28051J3QMA2 81 aa11.07□□□□□ -0.64
Shox2-204ENSMUST00000162439 Mrpl34Q99N91 92 aa11.06□□□□□ -0.64
Shox2-204ENSMUST00000162439 Apoc4Q61268 124 aa11.05□□□□□ -0.64
Shox2-204ENSMUST00000162439 Cby1Q9D1C2 127 aa11.04□□□□□ -0.64
Shox2-204ENSMUST00000162439 Gm10267M0QWD8 85 aa11.02□□□□□ -0.65
Shox2-204ENSMUST00000162439 Reg3aO09037 175 aa11.02□□□□□ -0.65
Shox2-204ENSMUST00000162439 Gm37013Q8K491 104 aa11.02□□□□□ -0.65
Shox2-204ENSMUST00000162439 Scgb1b2O35176 93 aa11.01□□□□□ -0.65
Shox2-204ENSMUST00000162439 NrepQ07475 68 aa11□□□□□ -0.65
Shox2-204ENSMUST00000162439 Defb13Q8R2I4 64 aa11□□□□□ -0.65
Shox2-204ENSMUST00000162439 Q9DAA3 117 aa11□□□□□ -0.65
Shox2-204ENSMUST00000162439 BikO70337 150 aa10.99□□□□□ -0.65
Shox2-204ENSMUST00000162439 Chtf8P0CG14 533 aa10.98□□□□□ -0.65
Shox2-204ENSMUST00000162439 Spink13Q3UTS8 97 aa10.98□□□□□ -0.65
Shox2-204ENSMUST00000162439 Krtap3-2Q9D638 99 aa10.97□□□□□ -0.65
Shox2-204ENSMUST00000162439 Krtap3-3Q9D7P0 99 aa10.97□□□□□ -0.65
Shox2-204ENSMUST00000162439 Krtap4-6Q3V4B7 195 aa10.94□□□□□ -0.66
Shox2-204ENSMUST00000162439 Cox7cP17665 63 aa10.93□□□□□ -0.66
Shox2-204ENSMUST00000162439 Gm17416Q30KP4 66 aa10.91□□□□□ -0.66
Shox2-204ENSMUST00000162439 B930094E09RikQ8C4T2 136 aa10.9□□□□□ -0.66
Shox2-204ENSMUST00000162439 Krtap13-1Q8K198 168 aa10.87□□□□□ -0.67
Shox2-204ENSMUST00000162439 Pde6gP09174 87 aa10.85□□□□□ -0.67
Shox2-204ENSMUST00000162439 Mdn1A2ANY6 5589 aaKnown RBP10.83□□□□□ -0.68
Shox2-204ENSMUST00000162439 MturnQ8CGA4 131 aa10.81□□□□□ -0.68
Shox2-204ENSMUST00000162439 Gm28539A0A087WSL9 92 aa10.8□□□□□ -0.68
Shox2-204ENSMUST00000162439 Lce1jD3YUU5 139 aa10.79□□□□□ -0.68
Shox2-204ENSMUST00000162439 BtcQ05928 177 aa10.79□□□□□ -0.68
Shox2-204ENSMUST00000162439 Lyrm7Q9DA03 104 aa10.77□□□□□ -0.69
Shox2-204ENSMUST00000162439 Krtap4-1Q3UUY3 169 aa10.74□□□□□ -0.69
Shox2-204ENSMUST00000162439 Gm4491E0CX42 125 aa10.7□□□□□ -0.7
Shox2-204ENSMUST00000162439 Krtap9-5A2A5X3 358 aa10.67□□□□□ -0.7
Shox2-204ENSMUST00000162439 Krtap1-5A2A590 122 aa10.66□□□□□ -0.7
Shox2-204ENSMUST00000162439 Krtap19-2Q925I0 141 aa10.63□□□□□ -0.71
Shox2-204ENSMUST00000162439 Ormdl1Q921I0 153 aa10.59□□□□□ -0.71
Shox2-204ENSMUST00000162439 MplkipQ9D011 178 aa10.52□□□□□ -0.73
Shox2-204ENSMUST00000162439 Gm11564A2A4L9 201 aa10.51□□□□□ -0.73
Shox2-204ENSMUST00000162439 Gm11563B1AQ90 168 aa10.51□□□□□ -0.73
Shox2-204ENSMUST00000162439 Gm11595B1AQA7 289 aa10.51□□□□□ -0.73
Shox2-204ENSMUST00000162439 Krtap4-8B1AQA8 209 aa10.51□□□□□ -0.73
Shox2-204ENSMUST00000162439 2210017I01RikA0A0A6YVV1 95 aa10.49□□□□□ -0.73
Shox2-204ENSMUST00000162439 Xcl1P47993 114 aa10.48□□□□□ -0.73
Shox2-204ENSMUST00000162439 Gm11027G8JL69 66 aa10.44□□□□□ -0.74
Shox2-204ENSMUST00000162439 2310079G19RikQ9D6L6 185 aa10.43□□□□□ -0.74
Shox2-204ENSMUST00000162439 Tax1bp3Q9DBG9 124 aa10.42□□□□□ -0.74
Shox2-204ENSMUST00000162439 Gm26602M0QWA4 95 aa10.37□□□□□ -0.75
Shox2-204ENSMUST00000162439 Naa38Q9D2U5 125 aa10.36□□□□□ -0.75
Shox2-204ENSMUST00000162439 Krtap12-1Q9Z287 130 aa10.35□□□□□ -0.75
Shox2-204ENSMUST00000162439 Gm26920S4R2A5 56 aa10.35□□□□□ -0.75
Shox2-204ENSMUST00000162439 Ubl5Q9EPV8 73 aa10.29□□□□□ -0.76
Shox2-204ENSMUST00000162439 Fam229bQ8CF36 80 aa10.28□□□□□ -0.76
Shox2-204ENSMUST00000162439 9230102O04RikA2ASX7 82 aa10.27□□□□□ -0.77
Shox2-204ENSMUST00000162439 Prr15lQ8JZM2 100 aa10.27□□□□□ -0.77
Shox2-204ENSMUST00000162439 Gm6358A0A087WPH4 74 aa10.24□□□□□ -0.77
Shox2-204ENSMUST00000162439 A0A286YCQ8 80 aa10.22□□□□□ -0.77
Shox2-204ENSMUST00000162439 Q8BGJ3 129 aa10.22□□□□□ -0.77
Shox2-204ENSMUST00000162439 Pla2g10Q9QXX3 151 aa10.21□□□□□ -0.77
Shox2-204ENSMUST00000162439 A0A286YE49 62 aa10.2□□□□□ -0.78
Shox2-204ENSMUST00000162439 Krtap4-9B1AQA9 244 aa10.18□□□□□ -0.78
Shox2-204ENSMUST00000162439 Gm19426M0QWC7 77 aa10.17□□□□□ -0.78
Shox2-204ENSMUST00000162439 Fsip2A2ARZ3 6995 aa10.16□□□□□ -0.78
Shox2-204ENSMUST00000162439 Gm10999F6Q4M4 69 aa10.16□□□□□ -0.78
Shox2-204ENSMUST00000162439 Mtatp8P03930 67 aa10.16□□□□□ -0.78
Shox2-204ENSMUST00000162439 Tmem254aP0DN89 123 aa10.16□□□□□ -0.78
Shox2-204ENSMUST00000162439 Tmem254bP0DN90 123 aa10.16□□□□□ -0.78
Shox2-204ENSMUST00000162439 Tmem254cP0DN91 123 aa10.16□□□□□ -0.78
Shox2-204ENSMUST00000162439 Trav3-1Q5R1I8 114 aa10.14□□□□□ -0.79
Shox2-204ENSMUST00000162439 Samd13D3YUG0 102 aa10.11□□□□□ -0.79
Shox2-204ENSMUST00000162439 Prm2P07978 107 aa10.11□□□□□ -0.79
Shox2-204ENSMUST00000162439 Defb38Q7TNV7 63 aa10.07□□□□□ -0.8
Shox2-204ENSMUST00000162439 BatfO35284 125 aa10.04□□□□□ -0.8
Shox2-204ENSMUST00000162439 Krtap3-1A2A591 98 aa10.03□□□□□ -0.8
Shox2-204ENSMUST00000162439 Spink8Q09TK9 105 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 81.3 ms