RNA–Protein interactions for RNA: ENSMUST00000159910.7

Vcan-206, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 8,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-206ENSMUST00000159910 Lelp1Q9DAE3 120 aa4.3□□□□□ -1.72
Vcan-206ENSMUST00000159910 Frem2Q6NVD0 3160 aa4.3□□□□□ -1.72
Vcan-206ENSMUST00000159910 Zzef1Q5SSH7 2924 aa4.29□□□□□ -1.72
Vcan-206ENSMUST00000159910 Tenm1Q9WTS4 2731 aa4.29□□□□□ -1.72
Vcan-206ENSMUST00000159910 Zfhx4Q9JJN2 3550 aa4.29□□□□□ -1.72
Vcan-206ENSMUST00000159910 Celsr1O35161 3034 aa4.29□□□□□ -1.72
Vcan-206ENSMUST00000159910 Gm17416Q30KP4 66 aa4.28□□□□□ -1.72
Vcan-206ENSMUST00000159910 Tnp2P11378 117 aa4.27□□□□□ -1.73
Vcan-206ENSMUST00000159910 DspE9Q557 2883 aaKnown RBP4.27□□□□□ -1.73
Vcan-206ENSMUST00000159910 D6Ertd527eA0A0N4SWI3 464 aa4.26□□□□□ -1.73
Vcan-206ENSMUST00000159910 Zfhx3Q61329 3726 aa4.25□□□□□ -1.73
Vcan-206ENSMUST00000159910 Gm9508A0A1W2P7W0 230 aa4.24□□□□□ -1.73
Vcan-206ENSMUST00000159910 Nf1Q04690 2841 aa4.23□□□□□ -1.73
Vcan-206ENSMUST00000159910 Gm7137J3QMW1 236 aa4.22□□□□□ -1.73
Vcan-206ENSMUST00000159910 Gm20537G3UYK7 97 aa4.22□□□□□ -1.73
Vcan-206ENSMUST00000159910 2310061N02RikQ9D6S9 174 aa4.21□□□□□ -1.74
Vcan-206ENSMUST00000159910 Vps13cQ8BX70 3748 aa4.2□□□□□ -1.74
Vcan-206ENSMUST00000159910 Gm884A2A9H6 3643 aa4.2□□□□□ -1.74
Vcan-206ENSMUST00000159910 Chd9Q8BYH8 2885 aa4.19□□□□□ -1.74
Vcan-206ENSMUST00000159910 VcanQ62059 3357 aa4.18□□□□□ -1.74
Vcan-206ENSMUST00000159910 Trank1Q8BV79 2999 aa4.17□□□□□ -1.74
Vcan-206ENSMUST00000159910 Dmxl2Q8BPN8 3032 aa4.17□□□□□ -1.74
Vcan-206ENSMUST00000159910 SpenQ62504 3644 aaKnown RBP4.17□□□□□ -1.74
Vcan-206ENSMUST00000159910 Tenm3Q9WTS6 2715 aa4.17□□□□□ -1.74
Vcan-206ENSMUST00000159910 Gm36176A0A1W2P8D5 158 aa4.16□□□□□ -1.74
Vcan-206ENSMUST00000159910 Myo15aQ9QZZ4 3511 aa4.16□□□□□ -1.74
Vcan-206ENSMUST00000159910 Tenm4Q3UHK6 2771 aa4.16□□□□□ -1.74
Vcan-206ENSMUST00000159910 Megf8P60882 2789 aa4.16□□□□□ -1.74
Vcan-206ENSMUST00000159910 NbeaQ9EPN1 2936 aa4.14□□□□□ -1.75
Vcan-206ENSMUST00000159910 Ranbp2Q9ERU9 3053 aaKnown RBP4.13□□□□□ -1.75
Vcan-206ENSMUST00000159910 LystP97412 3788 aa4.12□□□□□ -1.75
Vcan-206ENSMUST00000159910 Akap9Q70FJ1 3797 aa4.12□□□□□ -1.75
Vcan-206ENSMUST00000159910 SpegQ62407 3262 aa4.11□□□□□ -1.75
Vcan-206ENSMUST00000159910 A930033H14RikG5E8X6 103 aa4.11□□□□□ -1.75
Vcan-206ENSMUST00000159910 FryE9Q8I9 3020 aa4.11□□□□□ -1.75
Vcan-206ENSMUST00000159910 Celsr2Q9R0M0 2920 aa4.1□□□□□ -1.75
Vcan-206ENSMUST00000159910 B930094E09RikQ8C4T2 136 aa4.1□□□□□ -1.75
Vcan-206ENSMUST00000159910 Gm17402F6Z0L5 76 aa4.1□□□□□ -1.75
Vcan-206ENSMUST00000159910 4933428G20RikQ9D3X4 101 aa4.03□□□□□ -1.76
Vcan-206ENSMUST00000159910 RelnQ60841 3461 aa4.03□□□□□ -1.76
Vcan-206ENSMUST00000159910 Csmd2V9GX34 3611 aa4.02□□□□□ -1.77
Vcan-206ENSMUST00000159910 LrbaQ9ESE1 2856 aa4□□□□□ -1.77
Vcan-206ENSMUST00000159910 Muc5acE9QAQ8 3455 aa4□□□□□ -1.77
Vcan-206ENSMUST00000159910 Dchs1E9PVD3 3291 aa3.98□□□□□ -1.77
Vcan-206ENSMUST00000159910 Lama5Q61001 3718 aa3.98□□□□□ -1.77
Vcan-206ENSMUST00000159910 Gm9507D3Z5T3 223 aa3.97□□□□□ -1.77
Vcan-206ENSMUST00000159910 Col7a1Q63870 2944 aa3.97□□□□□ -1.77
Vcan-206ENSMUST00000159910 2310079G19RikQ9D6L6 185 aa3.97□□□□□ -1.77
Vcan-206ENSMUST00000159910 Celsr3Q91ZI0 3301 aa3.96□□□□□ -1.77
Vcan-206ENSMUST00000159910 Adgrg4B7ZCC9 3073 aa3.96□□□□□ -1.78
Vcan-206ENSMUST00000159910 Ank2Q8C8R3 3898 aa3.91□□□□□ -1.78
Vcan-206ENSMUST00000159910 Cmya5Q70KF4 3739 aa3.9□□□□□ -1.78
Vcan-206ENSMUST00000159910 OtogO55225 2910 aa3.88□□□□□ -1.79
Vcan-206ENSMUST00000159910 Krtap10-4Q08EG8 221 aa3.87□□□□□ -1.79
Vcan-206ENSMUST00000159910 VwfQ8CIZ8 2813 aa3.85□□□□□ -1.79
Vcan-206ENSMUST00000159910 2210017I01RikA0A0A6YVV1 95 aa3.85□□□□□ -1.79
Vcan-206ENSMUST00000159910 Krtap10-10A0A1W2P7T6 217 aa3.83□□□□□ -1.8
Vcan-206ENSMUST00000159910 Smg1Q8BKX6 3658 aaKnown RBP3.81□□□□□ -1.8
Vcan-206ENSMUST00000159910 Svep1A2AVA0 3567 aa3.79□□□□□ -1.8
Vcan-206ENSMUST00000159910 Helz2E9QAM5 2947 aaKnown RBP3.78□□□□□ -1.8
Vcan-206ENSMUST00000159910 Tenm2Q9WTS5 2764 aa3.78□□□□□ -1.8
Vcan-206ENSMUST00000159910 Gm2696A0A1W2P709 240 aa3.78□□□□□ -1.8
Vcan-206ENSMUST00000159910 Csmd1Q923L3 3564 aa3.7□□□□□ -1.82
Vcan-206ENSMUST00000159910 BsnO88737 3942 aa3.68□□□□□ -1.82
Vcan-206ENSMUST00000159910 Gm19668J3QMD1 248 aa3.65□□□□□ -1.83
Vcan-206ENSMUST00000159910 Xirp2Q4U4S6 3784 aa3.64□□□□□ -1.83
Vcan-206ENSMUST00000159910 Fbn1Q61554 2873 aaKnown RBP3.61□□□□□ -1.83
Vcan-206ENSMUST00000159910 CubnQ9JLB4 3623 aa3.57□□□□□ -1.84
Vcan-206ENSMUST00000159910 Muc6Q80T03 2850 aa3.57□□□□□ -1.84
Vcan-206ENSMUST00000159910 Dnah3Q8BW94 4083 aa3.56□□□□□ -1.84
Vcan-206ENSMUST00000159910 Gm9918Q8BUR5 174 aa3.55□□□□□ -1.84
Vcan-206ENSMUST00000159910 Krtap13-1Q8K198 168 aa3.55□□□□□ -1.84
Vcan-206ENSMUST00000159910 Kmt2aP55200 3966 aa3.54□□□□□ -1.84
Vcan-206ENSMUST00000159910 TnxbO35452 4006 aa3.54□□□□□ -1.84
Vcan-206ENSMUST00000159910 Muc4Q8JZM8 3443 aa3.51□□□□□ -1.85
Vcan-206ENSMUST00000159910 Hspg2Q05793 3707 aaKnown RBP3.51□□□□□ -1.85
Vcan-206ENSMUST00000159910 Gm11939A2A592 99 aa3.48□□□□□ -1.85
Vcan-206ENSMUST00000159910 Krtap7-1Q9D3I6 87 aa3.47□□□□□ -1.85
Vcan-206ENSMUST00000159910 Dync2h1Q45VK7 4306 aa3.46□□□□□ -1.86
Vcan-206ENSMUST00000159910 Dnah6E9Q0B6 4144 aa3.44□□□□□ -1.86
Vcan-206ENSMUST00000159910 Dnah10D3YYQ8 4591 aa3.43□□□□□ -1.86
Vcan-206ENSMUST00000159910 Dnah7bL7N1Y0 4068 aa3.42□□□□□ -1.86
Vcan-206ENSMUST00000159910 Gm9736A0A1W2P7N1 277 aa3.41□□□□□ -1.86
Vcan-206ENSMUST00000159910 Krtap19-5O08632 62 aa3.41□□□□□ -1.86
Vcan-206ENSMUST00000159910 Dnah17Q69Z23 4481 aa3.4□□□□□ -1.87
Vcan-206ENSMUST00000159910 Dnah1E9Q8T7 4250 aa3.38□□□□□ -1.87
Vcan-206ENSMUST00000159910 Krtap3-1A2A591 98 aa3.37□□□□□ -1.87
Vcan-206ENSMUST00000159910 Csmd3Q80T79 3707 aa3.36□□□□□ -1.87
Vcan-206ENSMUST00000159910 Krtap3-2Q9D638 99 aa3.33□□□□□ -1.88
Vcan-206ENSMUST00000159910 Krtap3-3Q9D7P0 99 aa3.33□□□□□ -1.88
Vcan-206ENSMUST00000159910 Dnah14A0A140LIJ4 4489 aa3.31□□□□□ -1.88
Vcan-206ENSMUST00000159910 PrkdcP97313 4128 aa3.29□□□□□ -1.88
Vcan-206ENSMUST00000159910 PlecQ9QXS1 4691 aaKnown RBP3.29□□□□□ -1.88
Vcan-206ENSMUST00000159910 Fras1Q80T14 4010 aa3.27□□□□□ -1.89
Vcan-206ENSMUST00000159910 Gm10318A0A1W2P728 225 aa3.26□□□□□ -1.89
Vcan-206ENSMUST00000159910 Krtap19-9aF8WH65 55 aa3.25□□□□□ -1.89
Vcan-206ENSMUST00000159910 Krtap1-5A2A590 122 aa3.24□□□□□ -1.89
Vcan-206ENSMUST00000159910 Krtap8-1O08633 61 aa3.23□□□□□ -1.89
Vcan-206ENSMUST00000159910 Sprr2a3Q4KL71 83 aa3.23□□□□□ -1.89
Vcan-206ENSMUST00000159910 Sprr2a1Q9CQK8 83 aa3.23□□□□□ -1.89
Retrieved 100 of 22,080 RNA–protein pairs in 84.5 ms