RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Gm9112A2AI92 75 aa9.33□□□□□ -0.92
Col4a3bp-202ENSMUST00000109444 DspE9Q557 2883 aaKnown RBP9.33□□□□□ -0.92
Col4a3bp-202ENSMUST00000109444 Gm5965D3Z724 196 aa9.32□□□□□ -0.92
Col4a3bp-202ENSMUST00000109444 B930094E09RikQ8C4T2 136 aa9.32□□□□□ -0.92
Col4a3bp-202ENSMUST00000109444 FryE9Q8I9 3020 aa9.31□□□□□ -0.92
Col4a3bp-202ENSMUST00000109444 Wdfy4E9Q2M9 3149 aa9.31□□□□□ -0.92
Col4a3bp-202ENSMUST00000109444 Lrrc37aB1AWG4 3215 aa9.31□□□□□ -0.92
Col4a3bp-202ENSMUST00000109444 Zzef1Q5SSH7 2924 aa9.3□□□□□ -0.92
Col4a3bp-202ENSMUST00000109444 NbeaQ9EPN1 2936 aa9.29□□□□□ -0.92
Col4a3bp-202ENSMUST00000109444 Frem2Q6NVD0 3160 aa9.28□□□□□ -0.92
Col4a3bp-202ENSMUST00000109444 Gm17416Q30KP4 66 aa9.27□□□□□ -0.93
Col4a3bp-202ENSMUST00000109444 FlncQ8VHX6 2726 aaKnown RBP9.25□□□□□ -0.93
Col4a3bp-202ENSMUST00000109444 Unc80Q8BLN6 3261 aa9.24□□□□□ -0.93
Col4a3bp-202ENSMUST00000109444 FrylF8VQ05 3007 aa9.24□□□□□ -0.93
Col4a3bp-202ENSMUST00000109444 Celsr3Q91ZI0 3301 aa9.21□□□□□ -0.94
Col4a3bp-202ENSMUST00000109444 Dmxl2Q8BPN8 3032 aa9.2□□□□□ -0.94
Col4a3bp-202ENSMUST00000109444 Igfn1Q3KNY0 2849 aa9.19□□□□□ -0.94
Col4a3bp-202ENSMUST00000109444 Tenm3Q9WTS6 2715 aa9.17□□□□□ -0.94
Col4a3bp-202ENSMUST00000109444 Gm17402F6Z0L5 76 aa9.13□□□□□ -0.95
Col4a3bp-202ENSMUST00000109444 Lama1P19137 3084 aa9.12□□□□□ -0.95
Col4a3bp-202ENSMUST00000109444 Pdzd2E9Q1M1 2796 aa9.1□□□□□ -0.95
Col4a3bp-202ENSMUST00000109444 Celsr2Q9R0M0 2920 aa9.09□□□□□ -0.95
Col4a3bp-202ENSMUST00000109444 Tenm4Q3UHK6 2771 aa9.07□□□□□ -0.96
Col4a3bp-202ENSMUST00000109444 2210017I01RikA0A0A6YVV1 95 aa9.05□□□□□ -0.96
Col4a3bp-202ENSMUST00000109444 2310057N15RikQ9D6T8 200 aa8.99□□□□□ -0.97
Col4a3bp-202ENSMUST00000109444 Trank1Q8BV79 2999 aa8.98□□□□□ -0.97
Col4a3bp-202ENSMUST00000109444 Chd9Q8BYH8 2885 aa8.96□□□□□ -0.98
Col4a3bp-202ENSMUST00000109444 Col6a3E9PWQ3 3284 aa8.95□□□□□ -0.98
Col4a3bp-202ENSMUST00000109444 Brca2P97929 3329 aa8.89□□□□□ -0.99
Col4a3bp-202ENSMUST00000109444 Dchs2A0A0A6YW72 3346 aa8.88□□□□□ -0.99
Col4a3bp-202ENSMUST00000109444 Nf1Q04690 2841 aa8.87□□□□□ -0.99
Col4a3bp-202ENSMUST00000109444 Zfhx3Q61329 3726 aa8.83□□□□□ -1
Col4a3bp-202ENSMUST00000109444 VcanQ62059 3357 aa8.77□□□□□ -1.01
Col4a3bp-202ENSMUST00000109444 Gm11939A2A592 99 aa8.77□□□□□ -1.01
Col4a3bp-202ENSMUST00000109444 Helz2E9QAM5 2947 aaKnown RBP8.68□□□□□ -1.02
Col4a3bp-202ENSMUST00000109444 Krtap3-2Q9D638 99 aa8.66□□□□□ -1.02
Col4a3bp-202ENSMUST00000109444 Krtap3-3Q9D7P0 99 aa8.66□□□□□ -1.02
Col4a3bp-202ENSMUST00000109444 LrbaQ9ESE1 2856 aa8.66□□□□□ -1.02
Col4a3bp-202ENSMUST00000109444 Prm2P07978 107 aa8.65□□□□□ -1.02
Col4a3bp-202ENSMUST00000109444 Tenm1Q9WTS4 2731 aa8.6□□□□□ -1.03
Col4a3bp-202ENSMUST00000109444 Gm9736A0A1W2P7N1 277 aa8.59□□□□□ -1.03
Col4a3bp-202ENSMUST00000109444 Vps13cQ8BX70 3748 aa8.56□□□□□ -1.04
Col4a3bp-202ENSMUST00000109444 RelnQ60841 3461 aa8.52□□□□□ -1.05
Col4a3bp-202ENSMUST00000109444 Dchs1E9PVD3 3291 aa8.52□□□□□ -1.05
Col4a3bp-202ENSMUST00000109444 SpegQ62407 3262 aa8.51□□□□□ -1.05
Col4a3bp-202ENSMUST00000109444 Tenm2Q9WTS5 2764 aa8.49□□□□□ -1.05
Col4a3bp-202ENSMUST00000109444 Gm19668J3QMD1 248 aa8.46□□□□□ -1.06
Col4a3bp-202ENSMUST00000109444 Wdfy3Q6VNB8 3508 aa8.45□□□□□ -1.06
Col4a3bp-202ENSMUST00000109444 Krtap3-1A2A591 98 aa8.45□□□□□ -1.06
Col4a3bp-202ENSMUST00000109444 OtogO55225 2910 aa8.43□□□□□ -1.06
Col4a3bp-202ENSMUST00000109444 Krtap13-1Q8K198 168 aa8.4□□□□□ -1.06
Col4a3bp-202ENSMUST00000109444 Akap9Q70FJ1 3797 aa8.39□□□□□ -1.07
Col4a3bp-202ENSMUST00000109444 Gm9918Q8BUR5 174 aa8.38□□□□□ -1.07
Col4a3bp-202ENSMUST00000109444 Krtap19-5O08632 62 aa8.36□□□□□ -1.07
Col4a3bp-202ENSMUST00000109444 DmdP11531 3678 aa8.35□□□□□ -1.07
Col4a3bp-202ENSMUST00000109444 4933428G20RikQ9D3X4 101 aa8.3□□□□□ -1.08
Col4a3bp-202ENSMUST00000109444 Myo15aQ9QZZ4 3511 aa8.29□□□□□ -1.08
Col4a3bp-202ENSMUST00000109444 Muc5acE9QAQ8 3455 aa8.22□□□□□ -1.09
Col4a3bp-202ENSMUST00000109444 Megf8P60882 2789 aa8.2□□□□□ -1.1
Col4a3bp-202ENSMUST00000109444 VwfQ8CIZ8 2813 aa8.15□□□□□ -1.1
Col4a3bp-202ENSMUST00000109444 Csmd1Q923L3 3564 aa8.14□□□□□ -1.11
Col4a3bp-202ENSMUST00000109444 Fbn1Q61554 2873 aaKnown RBP8.13□□□□□ -1.11
Col4a3bp-202ENSMUST00000109444 Ank2Q8C8R3 3898 aa8.1□□□□□ -1.11
Col4a3bp-202ENSMUST00000109444 Smg1Q8BKX6 3658 aaKnown RBP7.94□□□□□ -1.14
Col4a3bp-202ENSMUST00000109444 Sprr2a3Q4KL71 83 aa7.91□□□□□ -1.14
Col4a3bp-202ENSMUST00000109444 Sprr2a1Q9CQK8 83 aa7.91□□□□□ -1.14
Col4a3bp-202ENSMUST00000109444 Krtap1-5A2A590 122 aa7.89□□□□□ -1.15
Col4a3bp-202ENSMUST00000109444 Lama5Q61001 3718 aa7.88□□□□□ -1.15
Col4a3bp-202ENSMUST00000109444 Gm10318A0A1W2P728 225 aa7.87□□□□□ -1.15
Col4a3bp-202ENSMUST00000109444 Col7a1Q63870 2944 aa7.86□□□□□ -1.15
Col4a3bp-202ENSMUST00000109444 Zfhx4Q9JJN2 3550 aa7.85□□□□□ -1.15
Col4a3bp-202ENSMUST00000109444 Krtap7-1Q9D3I6 87 aa7.85□□□□□ -1.15
Col4a3bp-202ENSMUST00000109444 SpenQ62504 3644 aaKnown RBP7.81□□□□□ -1.16
Col4a3bp-202ENSMUST00000109444 Crct1Q6PAI5 102 aa7.77□□□□□ -1.17
Col4a3bp-202ENSMUST00000109444 Gm884A2A9H6 3643 aa7.73□□□□□ -1.17
Col4a3bp-202ENSMUST00000109444 Dnah14A0A140LIJ4 4489 aa7.66□□□□□ -1.18
Col4a3bp-202ENSMUST00000109444 Huwe1Q7TMY8 4377 aaKnown RBP7.62□□□□□ -1.19
Col4a3bp-202ENSMUST00000109444 Krtap19-9aF8WH65 55 aa7.58□□□□□ -1.2
Col4a3bp-202ENSMUST00000109444 Muc6Q80T03 2850 aa7.58□□□□□ -1.2
Col4a3bp-202ENSMUST00000109444 Dnah17Q69Z23 4481 aa7.54□□□□□ -1.2
Col4a3bp-202ENSMUST00000109444 Krtap1-4Q3V2D6 188 aa7.54□□□□□ -1.2
Col4a3bp-202ENSMUST00000109444 Cmya5Q70KF4 3739 aa7.54□□□□□ -1.2
Col4a3bp-202ENSMUST00000109444 Dnah5Q8VHE6 4621 aa7.51□□□□□ -1.21
Col4a3bp-202ENSMUST00000109444 Vps13dB1ART2 4390 aa7.49□□□□□ -1.21
Col4a3bp-202ENSMUST00000109444 Muc4Q8JZM8 3443 aa7.48□□□□□ -1.21
Col4a3bp-202ENSMUST00000109444 Svep1A2AVA0 3567 aa7.48□□□□□ -1.21
Col4a3bp-202ENSMUST00000109444 Stard9Q80TF6 4561 aa7.48□□□□□ -1.21
Col4a3bp-202ENSMUST00000109444 Dnah10D3YYQ8 4591 aa7.47□□□□□ -1.21
Col4a3bp-202ENSMUST00000109444 Krtap19-9bQ99NG9 58 aa7.44□□□□□ -1.22
Col4a3bp-202ENSMUST00000109444 Gm19402J3QJV4 266 aa7.33□□□□□ -1.24
Col4a3bp-202ENSMUST00000109444 PlecQ9QXS1 4691 aaKnown RBP7.31□□□□□ -1.24
Col4a3bp-202ENSMUST00000109444 Krtap12-1Q9Z287 130 aa7.23□□□□□ -1.25
Col4a3bp-202ENSMUST00000109444 Gm6358A0A087WPH4 74 aa7.17□□□□□ -1.26
Col4a3bp-202ENSMUST00000109444 Dync2h1Q45VK7 4306 aa7.17□□□□□ -1.26
Col4a3bp-202ENSMUST00000109444 Krtap8-1O08633 61 aa7.17□□□□□ -1.26
Col4a3bp-202ENSMUST00000109444 Dnah2P0C6F1 4456 aa7.15□□□□□ -1.27
Col4a3bp-202ENSMUST00000109444 LystP97412 3788 aa7.14□□□□□ -1.27
Col4a3bp-202ENSMUST00000109444 Csmd2V9GX34 3611 aa7.1□□□□□ -1.27
Col4a3bp-202ENSMUST00000109444 Dnah11E9Q7N9 4488 aa7.08□□□□□ -1.28
Col4a3bp-202ENSMUST00000109444 Dnah3Q8BW94 4083 aa7.03□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms