RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 ApcQ61315 2845 aa6.32□□□□□ -1.4
Scn8a-203ENSMUST00000108908 Trank1Q8BV79 2999 aa6.29□□□□□ -1.4
Scn8a-203ENSMUST00000108908 Zzef1Q5SSH7 2924 aa6.28□□□□□ -1.4
Scn8a-203ENSMUST00000108908 Tnp2P11378 117 aa6.28□□□□□ -1.4
Scn8a-203ENSMUST00000108908 Igfn1Q3KNY0 2849 aa6.27□□□□□ -1.41
Scn8a-203ENSMUST00000108908 SpenQ62504 3644 aaKnown RBP6.27□□□□□ -1.41
Scn8a-203ENSMUST00000108908 9530053A07RikE9PVG8 2581 aa6.26□□□□□ -1.41
Scn8a-203ENSMUST00000108908 Gm10382Q3V0T5 144 aa6.25□□□□□ -1.41
Scn8a-203ENSMUST00000108908 Smg1Q8BKX6 3658 aaKnown RBP6.24□□□□□ -1.41
Scn8a-203ENSMUST00000108908 Gm884A2A9H6 3643 aa6.24□□□□□ -1.41
Scn8a-203ENSMUST00000108908 4933415A04RikQ9D443 101 aa6.24□□□□□ -1.41
Scn8a-203ENSMUST00000108908 Col6a5A6H584 2640 aa6.24□□□□□ -1.41
Scn8a-203ENSMUST00000108908 Rps29P62274 56 aa6.22□□□□□ -1.41
Scn8a-203ENSMUST00000108908 Lama5Q61001 3718 aa6.16□□□□□ -1.42
Scn8a-203ENSMUST00000108908 Stab2Q8R4U0 2559 aa6.15□□□□□ -1.43
Scn8a-203ENSMUST00000108908 Srrm2Q8BTI8 2703 aaKnown RBP6.13□□□□□ -1.43
Scn8a-203ENSMUST00000108908 Pkd1l1Q8R526 2615 aa6.13□□□□□ -1.43
Scn8a-203ENSMUST00000108908 Cox6b2Q80ZN9 88 aa6.13□□□□□ -1.43
Scn8a-203ENSMUST00000108908 Zfhx4Q9JJN2 3550 aa6.11□□□□□ -1.43
Scn8a-203ENSMUST00000108908 Celsr2Q9R0M0 2920 aa6.11□□□□□ -1.43
Scn8a-203ENSMUST00000108908 1700042G07RikB1AUF7 90 aa6.1□□□□□ -1.43
Scn8a-203ENSMUST00000108908 Cmya5Q70KF4 3739 aa6.1□□□□□ -1.43
Scn8a-203ENSMUST00000108908 Gm5965D3Z724 196 aa6.09□□□□□ -1.43
Scn8a-203ENSMUST00000108908 SmcpP15265 143 aa6.09□□□□□ -1.43
Scn8a-203ENSMUST00000108908 Muc5acE9QAQ8 3455 aa6.09□□□□□ -1.43
Scn8a-203ENSMUST00000108908 D6Ertd527eA0A0N4SWI3 464 aa6.08□□□□□ -1.44
Scn8a-203ENSMUST00000108908 2310057N15RikQ9D6T8 200 aa6.08□□□□□ -1.44
Scn8a-203ENSMUST00000108908 Tenm4Q3UHK6 2771 aa6.07□□□□□ -1.44
Scn8a-203ENSMUST00000108908 Tex15F8VPN2 2785 aa6.07□□□□□ -1.44
Scn8a-203ENSMUST00000108908 Hivep1Q03172 2688 aa6.06□□□□□ -1.44
Scn8a-203ENSMUST00000108908 Chd9Q8BYH8 2885 aa6.04□□□□□ -1.44
Scn8a-203ENSMUST00000108908 TgO08710 2766 aa6.04□□□□□ -1.44
Scn8a-203ENSMUST00000108908 LrbaQ9ESE1 2856 aa5.98□□□□□ -1.45
Scn8a-203ENSMUST00000108908 Gm21887J3QQ04 176 aa5.95□□□□□ -1.46
Scn8a-203ENSMUST00000108908 Pdzd2E9Q1M1 2796 aa5.95□□□□□ -1.46
Scn8a-203ENSMUST00000108908 FlncQ8VHX6 2726 aaKnown RBP5.95□□□□□ -1.46
Scn8a-203ENSMUST00000108908 FcgbpE9Q0B5 2583 aa5.93□□□□□ -1.46
Scn8a-203ENSMUST00000108908 Tenm3Q9WTS6 2715 aa5.93□□□□□ -1.46
Scn8a-203ENSMUST00000108908 OtogO55225 2910 aa5.91□□□□□ -1.46
Scn8a-203ENSMUST00000108908 Nf1Q04690 2841 aa5.9□□□□□ -1.46
Scn8a-203ENSMUST00000108908 Csmd2V9GX34 3611 aa5.86□□□□□ -1.47
Scn8a-203ENSMUST00000108908 Ank2Q8C8R3 3898 aa5.85□□□□□ -1.47
Scn8a-203ENSMUST00000108908 Svep1A2AVA0 3567 aa5.85□□□□□ -1.47
Scn8a-203ENSMUST00000108908 A930033H14RikG5E8X6 103 aa5.8□□□□□ -1.48
Scn8a-203ENSMUST00000108908 Gm9736A0A1W2P7N1 277 aa5.79□□□□□ -1.48
Scn8a-203ENSMUST00000108908 Gm20537G3UYK7 97 aa5.77□□□□□ -1.49
Scn8a-203ENSMUST00000108908 Ndufaf8A2AMZ4 74 aa5.76□□□□□ -1.49
Scn8a-203ENSMUST00000108908 Tnp1P10856 55 aa5.74□□□□□ -1.49
Scn8a-203ENSMUST00000108908 Tenm1Q9WTS4 2731 aa5.73□□□□□ -1.49
Scn8a-203ENSMUST00000108908 Helz2E9QAM5 2947 aaKnown RBP5.69□□□□□ -1.5
Scn8a-203ENSMUST00000108908 B930094E09RikQ8C4T2 136 aa5.66□□□□□ -1.5
Scn8a-203ENSMUST00000108908 Tenm2Q9WTS5 2764 aa5.66□□□□□ -1.5
Scn8a-203ENSMUST00000108908 2310079G19RikQ9D6L6 185 aa5.65□□□□□ -1.5
Scn8a-203ENSMUST00000108908 Gm40193A0A1B0GT39 78 aa5.59□□□□□ -1.51
Scn8a-203ENSMUST00000108908 Muc4Q8JZM8 3443 aa5.57□□□□□ -1.52
Scn8a-203ENSMUST00000108908 Gm10318A0A1W2P728 225 aa5.53□□□□□ -1.52
Scn8a-203ENSMUST00000108908 BsnO88737 3942 aa5.52□□□□□ -1.53
Scn8a-203ENSMUST00000108908 Gm17416Q30KP4 66 aa5.51□□□□□ -1.53
Scn8a-203ENSMUST00000108908 LystP97412 3788 aa5.51□□□□□ -1.53
Scn8a-203ENSMUST00000108908 Fbn1Q61554 2873 aaKnown RBP5.49□□□□□ -1.53
Scn8a-203ENSMUST00000108908 VwfQ8CIZ8 2813 aa5.48□□□□□ -1.53
Scn8a-203ENSMUST00000108908 Gm9918Q8BUR5 174 aa5.48□□□□□ -1.53
Scn8a-203ENSMUST00000108908 Gm9112A2AI92 75 aa5.48□□□□□ -1.53
Scn8a-203ENSMUST00000108908 2210017I01RikA0A0A6YVV1 95 aa5.44□□□□□ -1.54
Scn8a-203ENSMUST00000108908 Krtap19-5O08632 62 aa5.41□□□□□ -1.54
Scn8a-203ENSMUST00000108908 CubnQ9JLB4 3623 aa5.41□□□□□ -1.54
Scn8a-203ENSMUST00000108908 Prm2P07978 107 aa5.41□□□□□ -1.54
Scn8a-203ENSMUST00000108908 Huwe1Q7TMY8 4377 aaKnown RBP5.4□□□□□ -1.55
Scn8a-203ENSMUST00000108908 Crct1Q6PAI5 102 aa5.39□□□□□ -1.55
Scn8a-203ENSMUST00000108908 Col7a1Q63870 2944 aa5.37□□□□□ -1.55
Scn8a-203ENSMUST00000108908 Hspg2Q05793 3707 aaKnown RBP5.36□□□□□ -1.55
Scn8a-203ENSMUST00000108908 Xirp2Q4U4S6 3784 aa5.35□□□□□ -1.55
Scn8a-203ENSMUST00000108908 Gm11939A2A592 99 aa5.35□□□□□ -1.55
Scn8a-203ENSMUST00000108908 Gm17402F6Z0L5 76 aa5.32□□□□□ -1.56
Scn8a-203ENSMUST00000108908 Megf8P60882 2789 aa5.29□□□□□ -1.56
Scn8a-203ENSMUST00000108908 Krtap13-1Q8K198 168 aa5.28□□□□□ -1.56
Scn8a-203ENSMUST00000108908 Gm19668J3QMD1 248 aa5.26□□□□□ -1.57
Scn8a-203ENSMUST00000108908 Dnah14A0A140LIJ4 4489 aa5.25□□□□□ -1.57
Scn8a-203ENSMUST00000108908 Csmd3Q80T79 3707 aa5.24□□□□□ -1.57
Scn8a-203ENSMUST00000108908 Muc6Q80T03 2850 aa5.16□□□□□ -1.58
Scn8a-203ENSMUST00000108908 Krtap3-2Q9D638 99 aa5.13□□□□□ -1.59
Scn8a-203ENSMUST00000108908 Krtap3-3Q9D7P0 99 aa5.13□□□□□ -1.59
Scn8a-203ENSMUST00000108908 Krtap3-1A2A591 98 aa5.12□□□□□ -1.59
Scn8a-203ENSMUST00000108908 Dnah10D3YYQ8 4591 aa4.99□□□□□ -1.61
Scn8a-203ENSMUST00000108908 4933428G20RikQ9D3X4 101 aa4.98□□□□□ -1.61
Scn8a-203ENSMUST00000108908 Dnah7bL7N1Y0 4068 aa4.97□□□□□ -1.61
Scn8a-203ENSMUST00000108908 PrkdcP97313 4128 aa4.92□□□□□ -1.62
Scn8a-203ENSMUST00000108908 Dnah17Q69Z23 4481 aa4.92□□□□□ -1.62
Scn8a-203ENSMUST00000108908 Kmt2aP55200 3966 aa4.92□□□□□ -1.62
Scn8a-203ENSMUST00000108908 Dnah3Q8BW94 4083 aa4.89□□□□□ -1.63
Scn8a-203ENSMUST00000108908 Dnah11E9Q7N9 4488 aa4.88□□□□□ -1.63
Scn8a-203ENSMUST00000108908 Gm18596A0A1W2P860 280 aa4.87□□□□□ -1.63
Scn8a-203ENSMUST00000108908 TnxbO35452 4006 aa4.86□□□□□ -1.63
Scn8a-203ENSMUST00000108908 Dnah6E9Q0B6 4144 aa4.86□□□□□ -1.63
Scn8a-203ENSMUST00000108908 Gm6358A0A087WPH4 74 aa4.84□□□□□ -1.63
Scn8a-203ENSMUST00000108908 Krtap1-5A2A590 122 aa4.82□□□□□ -1.64
Scn8a-203ENSMUST00000108908 Vps13dB1ART2 4390 aa4.81□□□□□ -1.64
Scn8a-203ENSMUST00000108908 Dync2h1Q45VK7 4306 aa4.79□□□□□ -1.64
Scn8a-203ENSMUST00000108908 Krtap19-9aF8WH65 55 aa4.78□□□□□ -1.64
Scn8a-203ENSMUST00000108908 Dnah1E9Q8T7 4250 aa4.78□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 79.5 ms